Department of Basic Medicine

Research Output

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Comment/debate
2020

Publisher Correction: Integrated exome and RNA sequencing of dedifferentiated liposarcoma (Nature Communications, (2019), 10, 1, (5683), 10.1038/s41467-019-13286-z)

Hirata, M., Asano, N., Katayama, K., Yoshida, A., Tsuda, Y., Sekimizu, M., Mitani, S., Kobayashi, E., Komiyama, M., Fujimoto, H., Goto, T., Iwamoto, Y., Naka, N., Iwata, S., Nishida, Y., Hiruma, T., Hiraga, H., Kawano, H., Motoi, T., Oda, Y. & 12 others, Matsubara, D., Fujita, M., Shibata, T., Nakagawa, H., Nakayama, R., Kondo, T., Imoto, S., Miyano, S., Kawai, A., Yamaguchi, R., Ichikawa, H. & Matsuda, K., Dec 1 2020, In : Nature communications. 11, 1, 1024.

Research output: Contribution to journalComment/debate

Open Access
2019

Corrigendum to “Differential genomic destabilisation in human cells with pathogenic MSH2 mutations introduced by genome editing” [Exp. Cell Res. 377 (2019) 24–35](S0014482719300825)(10.1016/j.yexcr.2019.02.020)

Hayashida, G., Shioi, S., Hidaka, K., Fujikane, R., Hidaka, M., Tsurimoto, T., Tsuzuki, T., Oda, S. & Nakatsu, Y., Oct 1 2019, In : Experimental Cell Research. 383, 1, 111432.

Research output: Contribution to journalComment/debate

Spread through air spaces in lung neuroendocrine tumor

Kozuma, Y., Toyokawa, G., Yamada, Y., Shoji, F., Yamazaki, K., Oda, Y. & Takeo, S., Dec 1 2019, In : Translational Lung Cancer Research. 8, p. S439-S442

Research output: Contribution to journalComment/debate

Open Access

Toward understanding de novo germline mutations in mammals

Ohno, M., Jan 1 2019, In : Genes and Genetic Systems. 94, 1, p. 1 1 p.

Research output: Contribution to journalComment/debate

Open Access
2018

Author response: Prevalence of and risk factors for cerebral microbleeds in a general Japanese elderly community

Hata, J., Yubi, T. & Ninomiya, T., Dec 1 2018, In : Neurology: Clinical Practice. 8, 6, p. 464-465 2 p.

Research output: Contribution to journalComment/debate

Corrigendum to “Thaumasiovibrio occultus gen. nov. sp. nov. and Thaumasiovibrio subtropicus sp. nov. within the family Vibrionaceae, isolated from coral reef seawater off Ishigaki Island, Japan” [Syst. Appl. Microbiol. 40 (5) (2017) 290–296](S0723202017300607)(10.1016/j.syapm.2017.04.003))

Amin, A. K. M. R., Tanaka, M., Al-saari, N., Feng, G., Mino, S., Ogura, Y., Hayashi, T., Meirelles, P. M., Thompson, F. L., Gomez-Gil, B., Sawabe, T. & Sawabe, T., Jan 2018, In : Systematic and Applied Microbiology. 41, 1, p. 62-63 2 p.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)

Publisher correction: Multiancestry genome-wide association study of 520,000 subjects identifies 32 loci associated with stroke and stroke subtypes(Nature Genetics, (2018) 50, 4, (524-537), 10.1038/s41588-018-0058-3)

AFGen Consortium, Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium, International Genomics of Blood Pressure (iGEN-BP) Consortium, INVENT Consortium, STARNET, Biobank Japan Cooperative Hospital Group, COMPASS Consortium, EPIC-CVD Consortium, EPIC-InterAct Consortium, International Stroke Genetics Consortium (ISGC), METASTROKE Consortium, Neurology Working Group of the CHARGE Consortium, NINDS Stroke Genetics Network (SiGN), UK Young Lacunar DNA Study & MEGASTROKE Consortium, Apr 1 2018, In : Nature genetics. 51, 7, p. 1192-1193 2 p.

Research output: Contribution to journalComment/debate

Open Access
2017

Author response: Trends in dementia prevalence, incidence, and survival rate in a Japanese community

Ohara, T. & Ninomiya, T., Oct 31 2017, In : Neurology. 89, 18, p. 1930-1931 2 p.

Research output: Contribution to journalComment/debate

Correction: Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053)

Tanaka, M., Endo, S., Kotake, F., Al-Saari, N., Amin, A. K. M. R., Feng, G., Mino, S., Doi, H., Ogura, Y., Hayashi, T., Suda, W., Hattori, M., Yumoto, I., Sawabe, T., Sawabe, T. & Araki, T., Dec 2017, In : PloS one. 12, 12, e0189555.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)

Draft genome sequence of Rubricoccus marinus SG-29T, a marine bacterium within the family Rhodothermaceae, which contains two different rhodopsin genes

Nakajima, Y., Yoshizawa, S., Park, S., Kumagai, Y., Wong, S. K., Ogura, Y., Hayashi, T. & Kogure, K., Sep 1 2017, In : Genome Announcements. 5, 38, e00990-17.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)

Erratum: Correction: Integrated Multiregional Analysis Proposing a New Model of Colorectal Cancer Evolution (PLoS genetics (2016) 12 2 (e1005778))

Uchi, R., Takahashi, Y., Niida, A., Shimamura, T., Hirata, H., Sugimachi, K., Sawada, G., Iwaya, T., Kurashige, J., Shinden, Y., Iguchi, T., Eguchi, H., Chiba, K., Shiraishi, Y., Nagae, G., Yoshida, K., Nagata, Y., Haeno, H., Yamamoto, H., Ishii, H. & 21 others, Doki, Y., Iinuma, H., Sasaki, S., Nagayama, S., Yamada, K., Yachida, S., Kato, M., Shibata, T., Oki, E., Saeki, H., Shirabe, K., Oda, Y., Maehara, Y., Komune, S., Mori, M., Suzuki, Y., Yamamoto, K., Aburatani, H., Ogawa, S., Miyano, S. & Mimori, K., May 1 2017, In : PLoS genetics. 13, 5, p. e1006798

Research output: Contribution to journalComment/debate

Open Access
1 Citation (Scopus)
2016

Angiomatoid fibrous histiocytoma

Inoue, Y., Terawaki, S., Imamura, K., Kubota, Y., Tsuneyoshi, M., Kohashi, K., Yamada, Y. & Oda, Y., Jan 1 2016, In : Nishinihon Journal of Dermatology. 78, 3, p. 219-220 2 p.

Research output: Contribution to journalComment/debate

Erratum: The adaptor protein p40phox as a positive regulator of the superoxide-producing phagocyte oxidase (EMBO Journal (2002) 21 (6312-6320) DOI 10.1093/emboj/cdf642)

Kuribayashi, F., Nunoi, H., Wakamatsu, K., Tsunawaki, S., Sato, K., Ito, T. & Sumimoto, H., Feb 1 2016, In : EMBO Journal. 35, 3, p. 369-370 2 p.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)
2015
4 Citations (Scopus)

Comparative cut-off value setting of pruritus intensity in visual analogue scale and verbal rating scale

Kido-Nakahara, M., Katoh, N., Saeki, H., Mizutani, H., Hagihara, A., Takeuchi, S., Nakahara, T., Masuda, K., Tamagawa-Mineoka, R., Nakagawa, H., Omoto, Y., Matsubara, K. & Furue, M., Jan 1 2015, In : Acta dermato-venereologica. 95, 3, p. 345-346 2 p.

Research output: Contribution to journalComment/debate

15 Citations (Scopus)

Correction: Protective mAbs and Cross-Reactive mAbs Raised by Immunization with Engineered Marburg Virus GPs ((2015), 11, 10)

Fusco, M. L., Hashiguchi, T., Cassan, R., Biggins, J. E., Murin, C. D., Warfield, K. L., Li, S., Holtsberg, F. W., Shulenin, S., Vu, H., Olinger, G. G., Kim, D. H., Whaley, K. J., Zeitlin, L., Ward, A. B., Nykiforuk, C., Aman, M. J., Berry, J. D. & Saphire, E. O., Oct 9 2015, In : PLoS pathogens. 11, 10, e1005212.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)

Erratum: PSMC5, a 19S proteasomal ATPase, regulates cocaine action in the nucleus accumbens (PLoS ONE (2015) 10:5 (e0126710) DOI: 10.1371/journal.pone.0126710)

Ohnishi, Y. H., Ohnishi, Y. N., Nakamura, T., Ohno, M., Kennedy, P. J., Ohkawa, Y., Nishi, A., Neve, R., Tsuzuki, T. & Nestler, E. J., Jun 25 2015, In : PloS one. 10, 6, e0131263.

Research output: Contribution to journalComment/debate

2014

Computer simulation as an alternative to animal use in pharmacology education

Oike, M., Aug 11 2014, In : Folia Pharmacologica Japonica. 144, 2, p. 95-97 3 p.

Research output: Contribution to journalComment/debate

Erratum: Functional labeling of neurons and their projections using the synthetic activity-dependent promoter E-SARE (Nature Methods (2013) 10 (889-895))

Kawashima, T., Kitamura, K., Suzuki, K., Nonaka, M., Kamijo, S., Takemoto-Kimura, S., Kano, M., Okuno, H., Ohki, K. & Bito, H., Jan 1 2014, In : Nature Protocols. 9, 4, 1 p.

Research output: Contribution to journalComment/debate

Erratum: Functional labeling of neurons and their projections using the synthetic activity-dependent promoter E-SARE (Nature Methods (2013) 10 (889-895))

Kawashima, T., Kitamura, K., Suzuki, K., Nonaka, M., Kamijo, S., Takemoto-Kimura, S., Kano, M., Okuno, H., Ohki, K. & Bito, H., Feb 1 2014, In : Nature Methods. 11, 2, 1 p.

Research output: Contribution to journalComment/debate

Erratum to: Clinical impact of albuminuria and glomerular filtration rate on renal and cardiovascular events, and all-cause mortality in Japanese patients with type 2 diabetes (Clinical and Experimental Nephrology DOI: 10.1007/s10157-013-0879-4)

Wada, T., Haneda, M., Furuichi, K., Babazono, T., Yokoyama, H., Iseki, K., Araki, S. I., Ninomiya, T., Hara, S., Suzuki, Y., Iwano, M., Kusano, E., Moriya, T., Satoh, H., Nakamura, H., Shimizu, M., Toyama, T., Hara, A. & Makino, H., Aug 2014, In : Clinical and Experimental Nephrology. 18, 4, p. 621-622 2 p.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)
2012

Complete genome sequence of Bacillus cereus NC7401, which produces high levels of the emetic toxin cereulide

Takeno, A., Okamoto, A., Tori, K., Oshima, K., Hirakawa, H., Toh, H., Agata, N., Yamada, K., Ogasawara, N., Hayashi, T., Shimizu, T., Kuhara, S., Hattori, M. & Ohta, M., Sep 1 2012, In : Journal of bacteriology. 194, 17, p. 4767-4768 2 p.

Research output: Contribution to journalComment/debate

12 Citations (Scopus)
2010

Erratum: Enhanced antitumor effects of an engineered measles virus edmonston strain expressing the wild-type N, P, L genes on human renal cell carcinoma (Molecular Therapy (2010) 18 (544-551) DOI:10.1038/mt.2009.296)

Meng, X., Nakamura, T., Okazaki, T., Inoue, H., Takahashi, A., Miyamoto, S., Sakaguchi, G., Eto, M., Naito, S., Takeda, M., Yanagi, Y. & Tani, K., Jun 2010, In : Molecular Therapy. 18, 6, 1 p.

Research output: Contribution to journalComment/debate

The matrix protein of measles virus regulates viral RNA synthesis and assembly by interacting with the nucleocapsid protein (Journal of Virology (2009) 83, 20, (10374-10383))

Iwasaki, M., Takeda, M., Shirogane, Y., Nakatsu, Y., Nakamura, T. & Yanagi, Y., Jan 1 2010, In : Journal of virology. 84, 1, 1 p.

Research output: Contribution to journalComment/debate

海外研究生活のすすめ

Yasukawa, T., 2010, In : 細胞工学. 29, 5, p. 474-476

Research output: Contribution to journalComment/debate

2009

Authors' reply

Miyazaki, S. & Hagihara, A., Dec 1 2009, In : Focus on Alternative and Complementary Therapies. 14, 4, 1 p.

Research output: Contribution to journalComment/debate

国際色豊かな環境で

Yasukawa, T., 2009, In : 実験医学. 27, 18, p. 3040-3042

Research output: Contribution to journalComment/debate

2008

Ivy Cells: A Population of Nitric-Oxide-Producing, Slow-Spiking GABAergic Neurons and Their Involvement in Hippocampal Network Activity (DOI:10.1016/j.neuron.2008.01.034)

Fuentealba, P., Begum, R., Capogna, M., Jinno, S., Márton, L. F., Csicsvari, J., Thomson, A., Somogyi, P. & Klausberger, T., Apr 24 2008, In : Neuron. 58, 2, 1 p.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)
3 Citations (Scopus)
2007

The Japan Multi-institutional Collaborative Cohort Study (JMICC Study) to detect gene-environment interactions for cancer

Hamajima, N., Wakai, K., Naito, M., Nishio, K., Ishida, Y., Okada, R., Masui, K., Morita, E., Kuroishi, T., Cohort, C., Mikami, H., Ohira, M., Fujimoto, S., Takayama, K., Maruyama, E., Orii, Y., Sato, K., Masui, T., Matsui, K., Tamakoshi., A. & 92 others, Hashimoto, S., Nakachi, K., Imai, K., Eguchi, H., Takahashi, T., Okayama, A., Kurosawa, Y., Nakayama, T., Muto, K., Yamagata, Z., Asai, Y., Suzuki, M., Fukada, H., Tomoda, A., Misu, Y., Katase, S., Tokumasu, S., Kato, Y., Yoichi, M., Atsushi, K., Tajima, K., Hirose, K., Hiraki, A., Matsuo, K., Suzuki, T., Kuriki, K., Saito, T., Watanabe, M., Suzuki, S., Tokudome, S., Hosono, A., Arakawa, K., Hattori, N., Ando, R., Tanaka, T., Kitabayashi, Y., Ueshima, H., Kita, Y., Nakamura, Y., Matsui, K., Yamamoto, T., Chowdhury, T. T., Sugihara, H., Morita, Y., Tomioka, N., Watanabe, Y., Ozasa, K., Yuge, M., Hayashi, K., Shigeta, M., Mitani, S., Ozaki, E., Matsui, D., Sakazaki, T., Arisawa, K., Uemura, H., Hiyoshi, M., Sagara, Y., Kono, S., Yin, G., Nagano, J., Mizoue, T., Takayanagi, R., Ohnaka, K., Kawate, H., Adachi, M., Moore, M. A., Toyomura, K., Isomura, K., Hagiwara, T., Fukumoto, J., Nanri, A., Yamaji, T., Yoshida, D., Morita, M., Ueda, N., Maki, T., Ikeda, M., Tanaka, K., Shinchi, K., Higaki, Y., Hara, M., Sakamoto, T., Imaizumi, T., Taguchi, N., Horita, M., Takezaki, T., Niimura, H., Hirasada, K., Tatebou, M., Noriko, T. & Kus, K., 2007, In : Asian Pacific Journal of Cancer Prevention. 8, 2, p. 317-323 7 p.

Research output: Contribution to journalComment/debate

148 Citations (Scopus)
2001

Critical commentary to chordoid meningioma: A case report

Iwaki, T., Jan 1 2001, In : Pathology Research and Practice. 197, 7, 1 p.

Research output: Contribution to journalComment/debate

2000

Erratum: Effect of Arg145Gly mutation in human cardiac troponin I on the ATPase activity of cardiac myofibrils (Journal of Biochemistry (2000) 127:3 (355-357))

Takahashi-Yanaga, F., Morimoto, S. & Ohtsuki, I., Jan 1 2000, In : Journal of biochemistry. 128, 3, 1 p.

Research output: Contribution to journalComment/debate

1998
1 Citation (Scopus)

Erratum: A fatal case of hydrogen sulfide poisoning in a geothermal power plant (Journal of Forensic Sciences (1998) 43:4 (908-910))

Kage, S., Ito, S., Kishida, T., Kudo, K. & Ikeda, N., Jan 1 1998, In : Journal of Forensic Sciences. 43, 6, 1 p.

Research output: Contribution to journalComment/debate

1990

Orosomucoid 1 phenotyping from human urine by isoelectric focusing

Harada, A., Umetsu, K., Yuasa, I., Ikeda, N. & Suzuki, T., Jan 1 1990, In : Journal of Forensic Sciences. 35, 5, p. 1191-1195 5 p.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)