Department of Bioscience and Biotechnology

Research Output 1976 2020

Filter
Comment/debate
2019

Author Correction: Diversity in gut bacterial community of school-age children in Asia (Scientific Reports, (2015), 5, 1, (8397), 10.1038/srep08397)

Nakayama, J., Watanabe, K., Jiang, J., Matsuda, K., Chao, S. H., Haryono, P., La-ongkham, O., Sarwoko, M. A., Sujaya, I. N., Zhao, L., Chen, K. T., Chen, Y. P., Chiu, H. H., Hidaka, T., Huang, N. X., Kiyohara, C., Kurakawa, T., Sakamoto, N., Sonomoto, K., Tashiro, K. & 9 others, Tsuji, H., Chen, M. J., Leelavatcharamas, V., Liao, C. C., Nitisinprasert, S., Rahayu, E. S., Ren, F. Z., Tsai, Y. C. & Lee, Y. K., Dec 1 2019, In : Scientific reports. 9, 1, 6530.

Research output: Contribution to journalComment/debate

Open Access

Constitutive expression of phosphoketolase, a key enzyme for metabolic shift from homo- to heterolactic fermentation in Enterococcus mundtii QU 25

Nabeta, K., Watanabe, S., Chibazakura, T., Zendo, T., Sonomoto, K., Shimizu-Kadota, M. & Yoshikawa, H., Jan 1 2019, In : Bioscience of Microbiota, Food and Health. 38, 3, p. 111-114 4 p.

Research output: Contribution to journalComment/debate

Open Access
phosphoketolase
Enterococcus mundtii
Enterococcus
Homo
Fermentation

Correction to: Genetic diversity and genetic variation in morpho-physiological traits to improve heat tolerance in Spring barley (Molecular Biology Reports, (2018), 45, 6, (2441-2453), 10.1007/s11033-018-4410-6)

Sallam, A., Amro, A., Elakhdar, A., Dawood, M. F. A., Kumamaru, T. & Stephen Baenziger, P., Apr 1 2019, In : Molecular biology reports. 46, 2, 1 p.

Research output: Contribution to journalComment/debate

Hordeum
Molecular Biology
Japan
Research
Thermotolerance
2018
10 Citations (Scopus)

Are Peptides Absorbable Compounds?

Matsui, T., Jan 17 2018, In : Journal of Agricultural and Food Chemistry. 66, 2, p. 393-394 2 p.

Research output: Contribution to journalComment/debate

Biological Availability
Intestines
Mass Spectrometry
intestines
cell lines

Correction: Novel lysophospholipid acyltransferase plat1 of aurantiochytrium limacinum f26-b responsible for generation of palmitate-docosahexaenoate-phosphatidylcholine and phosphatidylethanolamine (PLoS ONE (2014) 9: 8 (e102377) DOI: 10.1371/journal.pone.0102377)

Abe, E., Ikeda, K., Nutahara, E., Hayashi, M., Yamashita, A., Taguchi, R., Doi, K., Honda, D., Okino, N. & Ito, M., Aug 2018, In : PloS one. 13, 8, e0203016.

Research output: Contribution to journalComment/debate

1-Acylglycerophosphocholine O-Acyltransferase
acyltransferases
Docosahexaenoic Acids
Palmitates
palmitates
fishery science
peroxides
lipid
cell lines
fisheries

Substrate specificity of Nudix hydrolases from Myxococcus xanthus

Kimura, Y., Yamamoto, Y., Kajimoto, S., Sakai, A. & Takegawa, K., Jan 1 2018, In : Journal of General and Applied Microbiology. 64, 2, p. 94-98 5 p.

Research output: Contribution to journalComment/debate

Myxococcus xanthus
Substrate Specificity
nudix hydrolases
2017
5' Untranslated Regions
5' untranslated regions
luciferase
Luciferases
Sulfur
2 Citations (Scopus)

Asian gut microbiome

Nakayama, J., Zhang, H. & Lee, Y. K., Jun 30 2017, In : Science Bulletin. 62, 12, p. 816-817 2 p.

Research output: Contribution to journalComment/debate

2 Citations (Scopus)

Corrigendum: Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.) (Scientific Reports, (2017), 7, 1, (41124), 10.1038/srep41124)

Mori, K., Shirasawa, K., Nogata, H., Hirata, C., Tashiro, K., Habu, T., Kim, S., Himeno, S., Kuhara, S. & Ikegami, H., Sep 25 2017, In : Scientific reports. 7, 1, 46784.

Research output: Contribution to journalComment/debate

Open Access
Sex Determination Processes
Carica
Ficus
Genome
Alleles

Fed-batch fermentation for enhanced lactic acid production from glucose/xylose mixture without carbon catabolite repression

Abdel-Rahman, M. A., Xiao, Y. & Wang, Y., Jan 1 2017, In : Seibutsu-kogaku Kaishi. 95, 2, 1 p.

Research output: Contribution to journalComment/debate

Catabolite Repression
batch fermentation
xylose
lactic acid
Fermentation
fructokinase
Fructose
Rats
Glycolysis
2016

Erratum to: Japanese traditional dietary fungus koji Aspergillus oryzae functions as a prebiotic for Blautia coccoides through glycosylceramide: Japanese dietary fungus koji is a new prebiotic (SpringerPlus, (2016), 5, (1321), 10.1186/s40064-016-2950-6)

Hamajima, H., Matsunaga, H., Fujikawa, A., Sato, T., Mitsutake, S., Yanagita, T., Nagao, K., Nakayama, J. & Kitagaki, H., Dec 1 2016, In : SpringerPlus. 5, 1, 1869.

Research output: Contribution to journalComment/debate

Aspergillus oryzae
Prebiotics
Chloroform
Acetone
Publications
1 Citation (Scopus)

In vitro culture and low temperature incubation tolerance of staged embryos of the silkworm, Bombyx mori

Fukumori, H., Fujii, T. & Banno, Y., Jan 1 2016, In : Journal of Insect Biotechnology and Sericology. 85, 2, p. 49-53 5 p.

Research output: Contribution to journalComment/debate

Bombyx
embryo culture
Cryopreservation
Bombyx mori
silkworms
Glycosphingolipids
Biosynthesis
Viruses
Infection
Glycosphingolipids
Biosynthesis
Viruses
Infection
2015

Erratum to: De novo sequencing and comparative analysis of expressed sequence tags from gynodioecious fig (Ficus carica L.) fruits: caprifig and common fig [Tree Genetics & Genomes, 9, (2013), 1075-1088, DOI:10.1007/s11295-013-0622-z]

Ikegami, H., Habu, T., Mori, K., Nogata, H., Hirata, C., Hirashima, K., Tashiro, K. & Kuhara, S., Dec 1 2015, In : Tree Genetics and Genomes. 11, 6, 1 p., 132.

Research output: Contribution to journalComment/debate

2 Citations (Scopus)
Shiga-Toxigenic Escherichia coli
Cytotoxins
Escherichia coli
Genes
DNA Sequence Analysis
2014
Arches
Crystal structure
carbonyl reductase (NADPH)

Erratum: Catalyser-21™, a mineral water derived from leaf soil, inhibits tumor cell invasion and angiogenesis (Cytotechnology (2007) 55 (61-70) (DOI 10.1007/s10616-007-9073-4))

Ye, J., Li, Y., Hamasaki, T., Nakamichi, N., Kawahara, T., Osada, K., Teruya, K., Kato, Y., Toh, K., Abe, M., Katakura, Y., Noguchi, K. & Shirahata, S., Mar 1 2014, In : Cytotechnology. 66, 2, p. 355-356 2 p.

Research output: Contribution to journalComment/debate

Mineral Waters
Tumors
Soil
Minerals
Cells
2013
8 Citations (Scopus)

Construction of a ligD disruptant for efficient gene targeting in white koji mold, aspergillus kawachii

Tashiro, S., Futagami, T., Wada, S., Kajiwara, Y., Takashita, H., Omori, T., Takahashi, T., Yamada, O., Takegawa, K. & Goto, M., Jul 30 2013, In : Journal of General and Applied Microbiology. 59, 3, p. 257-260 4 p.

Research output: Contribution to journalComment/debate

Microbial Genetics
Gene Knockout Techniques
Fungal Proteins
Gene Targeting
Homologous Recombination
Cell Aging
Biotechnology
Transforming Growth Factor beta
Biochemistry
Neoplasms

Erratum: Green tea and coffee consumption is inversely associated with depressive symptoms in a Japanese working population (Public Health Nutrition (2013) DOI: 10.1017/S1368980013000360)

Pham, N. M., Nanri, A., Kurotani, K., Kuwahara, K., Kume, A., Sato, M., Hayabuchi, H. & Mizoue, T., Jan 1 2013, In : Public Health Nutrition. 17, 3, 1 p.

Research output: Contribution to journalComment/debate

2012
36 Citations (Scopus)

Complete genome sequence of Lactococcus lactis IO-1, a lactic acid bacterium that utilizes xylose and produces high levels of l-lactic acid

Kato, H., Shiwa, Y., Oshima, K., Machii, M., Araya-Kojima, T., Zendo, T., Shimizu-Kadota, M., Hattori, M., Sonomoto, K. & Yoshikawa, H., Apr 1 2012, In : Journal of bacteriology. 194, 8, p. 2102-2103 2 p.

Research output: Contribution to journalComment/debate

Lactococcus lactis
Xylose
Lactic Acid
Genome
Bacteria
Corbicula
Sphingomyelins
Bivalvia
Molecular Cloning
Carrier Proteins

Erratum: Suppression of UVC-induced cell damage and enhancement of DNA repair by the fermented milk, Kefir (Cytotechnology (2002) 40 (125-137) DOI:10.1023/A:1023984304610)

Nagira, T., Narisawa, J., Teruya, K., Katakura, Y., Shim, S. Y., Kusumoto, K. I., Tokumaru, S., Tokumaru, K., Barnes, D. W. & Shirahata, S., Jan 1 2012, In : Cytotechnology. 64, 1, 1 p.

Research output: Contribution to journalComment/debate

Fermented milk
Repair
Cells
DNA
1 Citation (Scopus)
diaminopimelate dehydrogenase
Mutagenesis
NADP
Amino acids
Oxidoreductases
10 Citations (Scopus)

Genome sequence of Pantoea agglomerans strain IG1

Matsuzawa, T., Mori, K., Kadowaki, T., Shimada, M., Tashiro, K., Kuhara, S., Inagawa, H., Soma, G. I. & Takegawa, K., Mar 1 2012, In : Journal of bacteriology. 194, 5, p. 1258-1259 2 p.

Research output: Contribution to journalComment/debate

Pantoea
Genome
Lipopolysaccharides
Virus Diseases
Gram-Negative Bacteria
2011
11 Citations (Scopus)

A Myxococcus xanthus bacterial tyrosine kinase, BtkA, is required for the formation of mature spores

Kimura, Y., Yamashita, S., Mori, Y., Kitajima, Y. & Takegawa, K., Oct 1 2011, In : Journal of bacteriology. 193, 20, p. 5853-5857 5 p.

Research output: Contribution to journalComment/debate

Myxococcus xanthus
Starvation
Spores
Protein-Tyrosine Kinases
Glycerol
2007
Biotechnology
Autographa californica multiple nucleopolyhedrovirus
Nucleopolyhedrovirus
Recombinant proteins
Bombyx
Biotechnology
2004

Erratum: Phytosterol oxidation products are absorbed in the intestinal lymphatics in rats but do not accelerate atherosclerosis in apolipoprotein E-deficient mice (Journal of Nutrition (2004) 134 (1690-1696))

Tomoyori, H., Kawata, Y., Higuchi, T., Ichi, I., Sato, H., Sato, M., Ikeda, I. & Imaizumi, K., Oct 2004, In : Journal of Nutrition. 134, 10, p. 2738 1 p.

Research output: Contribution to journalComment/debate

Phytosterols
apolipoprotein E
phytosterols
Apolipoproteins E
atherosclerosis
2002

Erratum: Modulation of Mycobacterium tuberculosis DnaA protein-adenine nucleotide interactions by acidic phospholipids (Biochemical Journal (2002) 363 (305-311))

Yamamoto, K., Muniruzzaman, S., Rajagopalan, M. & Madiraju, M. V. V. S., Jun 15 2002, In : Biochemical Journal. 364, 3, p. 887-888 2 p.

Research output: Contribution to journalComment/debate

Adenine Nucleotides
Mycobacterium tuberculosis
Phospholipids
Modulation
Proteins
2001
5 Citations (Scopus)

Degradation profiles of potato starch melts through a capillary tube viscometer

Igura, N., Katoh, T., Hayakawa, I. & Fujio, Y., Dec 2001, In : Starch/Staerke. 53, 12, p. 623-628 6 p.

Research output: Contribution to journalComment/debate

viscometers
Capillary tubes
Viscometers
potato starch
Solanum tuberosum
2000
12 Citations (Scopus)

Erratum: Retraction: Walnuts lower serum cholesterol in Japanese men and women (The Journal of Nutrition (2000) 130 (171-176))

Iwamoto, M., Sato, M., Kono, M., Hirooka, Y., Sakai, K., Takeshta, A. & Imaizumi, K., Sep 20 2000, In : Journal of Nutrition. 130, 9, 1 p.

Research output: Contribution to journalComment/debate

Juglans
walnuts
Cholesterol
cholesterol
nutrition

Erratum: Establishment of human T cell clones exhibiting natural killer-like activity (Cytotechnology (1999) 31 (171-176))

Alam, S., Katakura, Y. & Shirahata, S., Feb 7 2000, In : Cytotechnology. 32, 1, 1 p.

Research output: Contribution to journalComment/debate

T-cells
Clone Cells
T-Lymphocytes

Erratum: Two lineages of mannose-binding lectin-associated serine protease (MASP) in vertebrates (Journal of Immunology (1998) 161 (4924-4930))

Endo, Y., Takahashi, M., Nakao, M., Saiga, H., Sekine, H., Matsushita, M., Nonaka, M. & Fujita, T., May 15 2000, In : Journal of Immunology. 164, 10, 1 p.

Research output: Contribution to journalComment/debate

Mannose-Binding Lectin
Serine Proteases
Allergy and Immunology
Vertebrates
1997
agonists
pesticides
synthesis
1995

Cloning of the gene encoding dna binding protein hu from bacillus stearothermophilus and its expression in escherichia coli

Kawamura, S., Kajiyama, H., Yamasaki, N. & Kimura, M., Jan 1 1995, In : Bioscience, Biotechnology and Biochemistry. 59, 1, p. 126-129 4 p.

Research output: Contribution to journalComment/debate

Geobacillus stearothermophilus
Gene encoding
Cloning
Bacilli
Escherichia coli
endoglycoceramidase
Glycosphingolipids
Phosphorylation
Epidermal Growth Factor Receptor
Hydrolysis
3 Citations (Scopus)

Segmental Motion of Subsite C of Hen Egg-White Lysozyme: Fluorescence Depolarization Studies of Kyn62-Lysozyme as an Active Analogue

Yamashita, S., Nishimoto, E. & Yamasaki, N., Jan 1 1995, In : Bioscience, Biotechnology and Biochemistry. 59, 8, p. 1579-1580 2 p.

Research output: Contribution to journalComment/debate

Egg White
Depolarization
Muramidase
Fluorescence
Kynurenine
1993
8 Citations (Scopus)

Cloning and sequencing of the gene encoding the ribosomal l7/l12-like protein of Mycobacterium bovis BCG

Ohara, N., Kimura, M., Wada, N. & Yamada, T., Jul 25 1993, In : Nucleic acids research. 21, 15, 1 p.

Research output: Contribution to journalComment/debate

Molecular Sequence Data
Bacterial Genes
Ribosomal Proteins
Molecular Cloning
Mycobacterium bovis
Acetylcholinesterase
Oxides
(1,3,2)oxazaphospholidine
1991
3 Citations (Scopus)

The complete amino acid sequence of ribonuclease from the seeds of bitter gourd

Ide, H., Kimura, M. & Arai, M., Sep 2 1991, In : FEBS Letters. 289, 1, 1 p.

Research output: Contribution to journalComment/debate

1989

Erratum

Tanaka, T., Yamamoto, K., Towprayoon, S., Nakajima, H., Sonomoto, K., Yokozeki, K., Kubota, K. & Tanaka, A., Oct 1 1989, In : Applied Microbiology and Biotechnology. 31, 5-6, 1 p.

Research output: Contribution to journalComment/debate

1979
71 Citations (Scopus)

Primary structure of ala chain of ricin D

Funatsu, G., Kimura, M. & Funatsu, M., Oct 1979, In : Agricultural and Biological Chemistry. 43, 10, p. 2221-2224 4 p.

Research output: Contribution to journalComment/debate

ricin
Ricin