Research output per year
Research output per year
- 1 - 50 out of 197 results
Search results
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2023
Alteration of a Shiga toxin-encoding phage associated with a change in toxin production level and disease severity in Escherichia coli
Miyata, T., Taniguchi, I., Nakamura, K., Gotoh, Y., Yoshimura, D., Itoh, T., Hirai, S., Yokoyama, E., Ohnishi, M., Iyoda, S., Ogura, Y. & Hayashi, T., 2023, In: Microbial Genomics. 9, 2, 000935.Research output: Contribution to journal › Article › peer-review
Open Access -
2022
Activation of caspase-1 is mediated by stimulation of interferon genes and NLR family pyrin domain containing 3 in monocytes of active systemic lupus erythematosus
Inokuchi, S., Mitoma, H., Kawano, S., Ayano, M., Kimoto, Y., Akahoshi, M., Arinobu, Y., Akashi, K., Horiuchi, T. & Niiro, H., 2022, In: Clinical and experimental rheumatology. 40, 3, p. 522-531 10 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
Controlled X-chromosome dynamics defines meiotic potential of female mouse in vitro germ cells
Severino, J., Bauer, M., Mattimoe, T., Arecco, N., Cozzuto, L., Lorden, P., Hamada, N., Nosaka, Y., Nagaoka, S. I., Audergon, P., Tarruell, A., Heyn, H., Hayashi, K., Saitou, M. & Payer, B., Jun 14 2022, In: EMBO Journal. 41, 12, e109457.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Draft Genome Sequences of Five Cystobasidium ongulense Strains Isolated from Areas near Syowa Station, East Antarctica
Tsuji, M., Ishihara, J. I., Gotoh, Y., Hayashi, T. & Takahashi, H., Jul 2022, In: Microbiology Resource Announcements. 11, 7Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Dual role of Ovol2 on the germ cell lineage segregation during gastrulation in mouse embryogenesis
Naitou, Y., Nagamatsu, G., Hamazaki, N., Shirane, K., Hayashi, M., Hayashi, M., Kobayashi, S. & Hayashi, K., Feb 2022, In: Development (Cambridge). 149, 4, dev200319.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
Expression level of the reprogramming factor NeuroD1 is critical for neuronal conversion efficiency from different cell types
Matsuda-Ito, K., Matsuda, T. & Nakashima, K., Dec 2022, In: Scientific reports. 12, 1, 17980.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Factors affecting patient satisfaction related to cost and treatment effectiveness in rheumatoid arthritis: results from the multicenter observational cohort study, FRANK Registry
Fujiwara, T., Kondo, M., Yamada, H., Haraguchi, A., Fujimura, K., Sakuraba, K., Kamura, S., Fukushi, J-I., Miyahara, H., Inoue, Y., Tsuru, T., Shuto, T., Yoshizawa, S., Suematsu, E., Miyamura, T., Ayano, M., Mitoma, H., Arinobu, Y., Niiro, H., Ohishi, M., & 14 others, Dec 2022, In: Arthritis Research and Therapy. 24, 1, 53.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Helicobacter cinaedi is a human-adapted lineage in the Helicobacter cinaedi/canicola/‘magdeburgensis’ complex
Gotoh, Y., Atsuta, Y., Taniguchi, T., Nishida, R., Nakamura, K., Ogura, Y., Misawa, N. & Hayashi, T., 2022, In: Microbial Genomics. 8, 5, 000830.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Hydroxychloroquine versus tacrolimus for the treatment of persistently active systemic lupus erythematosus
Ayano, M., Kimoto, Y., Mitoma, H., Akahoshi, M., Ono, N., Arinobu, Y., Akashi, K., Horiuchi, T. & Niiro, H., Feb 28 2022, In: Modern Rheumatology. 32, 2, p. 345-350 6 p.Research output: Contribution to journal › Article › peer-review
Open Access -
In-vitro maturation and transplantation of cryopreserved ovary tissue: understanding ovarian longevity
Silber, S. J., Goldsmith, S., Castleman, L., Hurlbut, K., Fan, Y., Melnick, J. & Hayashi, K., Mar 2022, In: Reproductive BioMedicine Online. 44, 3, p. 504-514 11 p.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Naïve-like pluripotency to pave the way for saving the northern white rhinoceros from extinction
Zywitza, V., Rusha, E., Shaposhnikov, D., Ruiz-Orera, J., Telugu, N., Rishko, V., Hayashi, M., Michel, G., Wittler, L., Stejskal, J., Holtze, S., Göritz, F., Hermes, R., Wang, J., Izsvák, Z., Colleoni, S., Lazzari, G., Galli, C., Hildebrandt, T. B., Hayashi, K., & 2 others, Dec 2022, In: Scientific reports. 12, 1, 3100.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Omics profiles of fecal and oral microbiota change in irritable bowel syndrome patients with diarrhea and symptom exacerbation
Tanaka, Y., Yamashita, R., Kawashima, J., Mori, H., Kurokawa, K., Fukuda, S., Gotoh, Y., Nakamura, K., Hayashi, T., Kasahara, Y., Sato, Y. & Fukudo, S., 2022, (Accepted/In press) In: Journal of gastroenterology.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Robust induction of primordial germ cells of white rhinoceros on the brink of extinction
Hayashi, M., Zywitza, V., Naitou, Y., Hamazaki, N., Goeritz, F., Hermes, R., Holtze, S., Lazzari, G., Galli, C., Stejskal, J., Diecke, S., Hildebrandt, T. B. & Hayashi, K., 2022, In: Science Advances. 8, 49, abp9683.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
Single mutation makes Escherichia coli an insect mutualist
Koga, R., Moriyama, M., Onodera-Tanifuji, N., Ishii, Y., Takai, H., Mizutani, M., Oguchi, K., Okura, R., Suzuki, S., Gotoh, Y., Hayashi, T., Seki, M., Suzuki, Y., Nishide, Y., Hosokawa, T., Wakamoto, Y., Furusawa, C. & Fukatsu, T., Aug 2022, In: Nature Microbiology. 7, 8, p. 1141-1150 10 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
TNFR2 Signaling Enhances Suppressive Abilities of Human Circulating T Follicular Regulatory Cells
Kawano, S., Mitoma, H., Inokuchi, S., Yamauchi, Y., Yokoyama, K., Nogami, J., Semba, Y., Ayano, M., Kimoto, Y., Akahoshi, M., Ono, N., Arinobu, Y., Akashi, K., Horiuchi, T. & Niiro, H., Mar 1 2022, In: Journal of immunology (Baltimore, Md. : 1950). 208, 5, p. 1057-1065 9 p.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
Year-round dynamics of amplicon sequence variant communities differ among eukaryotes, Imitervirales and prokaryotes in a coastal ecosystem
Prodinger, F., Endo, H., Takano, Y., Li, Y., Tominaga, K., Isozaki, T., Blanc-Mathieu, R., Gotoh, Y., Hayashi, T., Taniguchi, E., Nagasaki, K., Yoshida, T. & Ogata, H., Jan 8 2022, In: FEMS microbiology ecology. 97, 12Research output: Contribution to journal › Article › peer-review
3 Citations (Scopus) -
2021
Artificially produced gametes in mice, humans and other species
Hayashi, K., Galli, C., Diecke, S. & Hildebrandt, T. B., Jan 8 2021, In: Reproduction, Fertility and Development. 33, 2, p. 91-101 11 p.Research output: Contribution to journal › Article › peer-review
4 Citations (Scopus) -
Association of elevated serum soluble CD226 levels with the disease activity and flares of systemic lupus erythematosus
Nakano, M., Ayano, M., Kushimoto, K., Kawano, S., Higashioka, K., Inokuchi, S., Mitoma, H., Kimoto, Y., Akahoshi, M., Ono, N., Arinobu, Y., Akashi, K., Horiuchi, T. & Niiro, H., Dec 2021, In: Scientific reports. 11, 1, 16162.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Autoimmune manifestations associated with myelodysplastic syndrome predict a poor prognosis
Arinobu, Y., Kashiwado, Y., Miyawaki, K., Ayano, M., Kimoto, Y., Mitoma, H., Akahoshi, M., Miyamoto, T., Horiuchi, T., Akashi, K. & Niiro, H., Apr 2 2021, In: Medicine. 100, 13, p. e25406Research output: Contribution to journal › Article › peer-review
8 Citations (Scopus) -
CADM1 and CADM2 trigger neuropathogenic measles virus-mediated membrane fusion by acting in cis
Shirogane, Y., Takemoto, R., Suzuki, T., Kameda, T., Nakashima, K., Hashiguchi, T. & Yanagi, Y., Jul 2021, In: Journal of virology. 95, 14, e00528.Research output: Contribution to journal › Article › peer-review
7 Citations (Scopus) -
"Candidatus Mesenet longicola": Novel Endosymbionts of Brontispa longissima that Induce Cytoplasmic Incompatibility
Takano, S-I., Gotoh, Y. & Hayashi, T., Jan 16 2021, (E-pub ahead of print) In: Microbial Ecology.Research output: Contribution to journal › Article › peer-review
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Combinatrial treatment of anti-High Mobility Group Box-1 monoclonal antibody and epothilone B improves functional recovery after spinal cord contusion injury
Zhu, Y., Uezono, N., Yasui, T., Nakajo, M., Nagai, T., Wang, D., Nishibori, M. & Nakashima, K., Nov 2021, In: Neuroscience Research. 172, p. 13-25 13 p.Research output: Contribution to journal › Article › peer-review
5 Citations (Scopus) -
Comparative genomic and physiological analysis against clostridium scindens reveals eubacterium sp. C-25 as an atypical deoxycholic acid producer of the human gut microbiota
Song, I., Gotoh, Y., Ogura, Y., Hayashi, T., Fukiya, S. & Yokota, A., Nov 2021, In: Microorganisms. 9, 11, 2254.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Decreased Lamin B1 Levels Affect Gene Positioning and Expression in Postmitotic Neurons
Noguchi, A., Ito, K., Uosaki, Y., Ideta-Otsuka, M., Igarashi, K., Nakashima, H., Kakizaki, T., Kaneda, R., Uosaki, H., Yanagawa, Y., Nakashima, K., Arakawa, H. & Takizawa, T., Dec 2021, In: Neuroscience Research. 173, p. 22-33 12 p.Research output: Contribution to journal › Article › peer-review
3 Citations (Scopus) -
Diversification of Escherichia albertii H-Antigens and Development of H-Genotyping PCR
Nakae, K., Ooka, T., Murakami, K., Hara-Kudo, Y., Imuta, N., Gotoh, Y., Ogura, Y., Hayashi, T., Okamoto, Y. & Nishi, J., Nov 1 2021, In: Frontiers in Microbiology. 12, 737979.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (Scopus) -
Draft genome sequence of medusavirus stheno, isolated from the tatakai river of Uji, Japan
Yoshida, K., Zhang, R., Garcia, K. G., Endo, H., Gotoh, Y., Hayashi, T., Takemura, M. & Ogata, H., Jan 7 2021, In: Microbiology Resource Announcements. 10, 1, e0132320.Research output: Contribution to journal › Article › peer-review
Open Access8 Citations (Scopus) -
d-Tryptophan enhances the reproductive organ-specific expression of the amino acid transporter homolog Dr-SLC38A9 involved in the sexual induction of planarian Dugesia ryukyuensis
Maezawa, T., Ishikawa, M., Sekii, K., Nagamatsu, G., Furukawa, R. & Kobayashi, K., Dec 2021, In: Zoological Letters. 7, 1, 4.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Early-life midazolam exposure persistently changes chromatin accessibility to impair adult hippocampal neurogenesis and cognition
Doi, H., Matsuda, T., Sakai, A., Matsubara, S., Hoka, S., Yamaura, K. & Nakashima, K., Sept 21 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 38, e2107596118.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
Generation of ovarian follicles from mouse pluripotent stem cells
Yoshino, T., Suzuki, T., Nagamatsu, G., Yabukami, H., Ikegaya, M., Kishima, M., Kita, H., Imamura, T., Nakashima, K., Nishinakamura, R., Tachibana, M., Inoue, M., Shima, Y., Morohashi, K. I. & Hayashi, K., Jul 16 2021, In: Science. 373, 6552, eabe0237.Research output: Contribution to journal › Article › peer-review
42 Citations (Scopus) -
Growth factors with valproic acid restore injury-impaired hearing by promoting neuronal regeneration
Wakizono, T., Nakashima, H., Yasui, T., Noda, T., Aoyagi, K., Okada, K., Yamada, Y., Nakagawa, T. & Nakashima, K., Nov 22 2021, In: JCI Insight. 6, 22, e139171.Research output: Contribution to journal › Article › peer-review
Open Access4 Citations (Scopus) -
HLA-B52 allele in giant cell arteritis may indicate diffuse large-vessel vasculitis formation: a retrospective study
Kushimoto, K., Ayano, M., Nishimura, K., Nakano, M., Kimoto, Y., Mitoma, H., Ono, N., Arinobu, Y., Akashi, K., Horiuchi, T. & Niiro, H., Dec 2021, In: Arthritis Research and Therapy. 23, 1, 238.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Human PD-1hiCD8+ T Cells Are a Cellular Source of IL-21 in Rheumatoid Arthritis
Higashioka, K., Yoshimura, M., Sakuragi, T., Ayano, M., Kimoto, Y., Mitoma, H., Ono, N., Arinobu, Y., Kikukawa, M., Yamada, H., Horiuchi, T., Akashi, K. & Niiro, H., Mar 19 2021, In: Frontiers in Immunology. 12, 654623.Research output: Contribution to journal › Article › peer-review
Open Access9 Citations (Scopus) -
Increased Proportion of CD226+ B Cells Is Associated With the Disease Activity and Prognosis of Systemic Lupus Erythematosus
Nakano, M., Ayano, M., Kushimoto, K., Kawano, S., Higashioka, K., Inokuchi, S., Mitoma, H., Kimoto, Y., Akahoshi, M., Ono, N., Arinobu, Y., Akashi, K., Horiuchi, T. & Niiro, H., Jul 21 2021, In: Frontiers in Immunology. 12, 713225.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (Scopus) -
Infliximab for reversible dementia in acute onset of neuro-Behçet's disease: A case report and cytokine analysis
Imabayashi, K., Ayano, M., Higashioka, K., Yokoyama, K., Yamamoto, K., Takayama, K., Mitoma, H., Kimoto, Y., Akahoshi, M., Arinobu, Y., Akashi, K., Horiuchi, T. & Niiro, H., Aug 15 2021, In: Journal of Neuroimmunology. 357, 577631.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
MeCP2 controls neural stem cell fate specification through miR-199a-mediated inhibition of BMP-Smad signaling
Nakashima, H., Tsujimura, K., Irie, K., Imamura, T., Trujillo, C. A., Ishizu, M., Uesaka, M., Pan, M., Noguchi, H., Okada, K., Aoyagi, K., Andoh-Noda, T., Okano, H., Muotri, A. R. & Nakashima, K., May 18 2021, In: Cell Reports. 35, 7, 109124.Research output: Contribution to journal › Article › peer-review
Open Access10 Citations (Scopus) -
Metagenomic analysis of gut microbiota reveals its role in trimethylamine metabolism in heart failure
Emoto, T., Hayashi, T., Tabata, T., Yamashita, T., Watanabe, H., Takahashi, T., Gotoh, Y., Kami, K., Yoshida, N., Saito, Y., Tanaka, H., Matsumoto, K., Hayashi, T., Yamada, T. & Hirata, K. I., Sept 1 2021, In: International Journal of Cardiology. 338, p. 138-142 5 p.Research output: Contribution to journal › Article › peer-review
4 Citations (Scopus) -
Neural stem/precursor cells dynamically change their epigenetic landscape to differentially respond to BMP signaling for fate switching during brain development
Katada, S., Takouda, J., Nakagawa, T., Honda, M., Igarashi, K., Imamura, T., Ohkawa, Y., Sato, S., Kurumizaka, H. & Nakashima, K., Nov 1 2021, In: Genes and Development. 35, 21-22, p. 1431-1444 14 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
Neuronal activation modulates enhancer activity of genes for excitatory synaptogenesis through de novo DNA methylation
Kameda, T., Nakashima, H., Takizawa, T., Miura, F., Ito, T., Nakashima, K. & Imamura, T., 2021, In: Journal of Reproduction and Development. 67, 6, p. 369-379 11 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Outcomes of methotrexate-associated lymphoproliferative disorders in rheumatoid arthritis patients treated with disease-modifying anti-rheumatic drugs
Harada, T., Iwasaki, H., Muta, T., Urata, S., Sakamoto, A., Kohno, K., Takase, K., Miyamura, T., Sawabe, T., Asaoku, H., Oryoji, K., Fujisaki, T., Mori, Y., Yoshimoto, G., Ayano, M., Mitoma, H., Miyamoto, T., Niiro, H., Yamamoto, H., Oshiro, Y., & 5 others, Jul 2021, In: British Journal of Haematology. 194, 1, p. 101-110 10 p.Research output: Contribution to journal › Article › peer-review
2 Citations (Scopus) -
Pan-PI3Ki targets multiple B-ALL microenvironment interactions that fuel systemic and CNS relapse
Ridge, S. M., Whiteley, A. E., Yao, H., Price, T. T., Brockman, M. L., Murray, A. S., Simon, B. G., Islam, P. & Sipkins, D. A., 2021, In: Leukemia and Lymphoma. 62, 11, p. 2690-2702 13 p.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
Paternal MTHFR deficiency leads to hypomethylation of young retrotransposons and reproductive decline across two successive generations
Karahan, G., Chan, D., Shirane, K., McClatchie, T., Janssen, S., Baltz, J. M., Lorincz, M. & Trasler, J., Jun 15 2021, (E-pub ahead of print) In: Development (Cambridge, England).Research output: Contribution to journal › Article › peer-review
7 Citations (Scopus) -
Predictive factors of fetal and maternal pregnancy outcomes in Japanese patients with systemic lupus erythematosus
Irino, K., Arinobu, Y., Ayano, M., Kawano, S., Kimoto, Y., Mitoma, H., Akahoshi, M., Akashi, K., Horiuchi, T. & Niiro, H., Sept 2021, In: Lupus. 30, 10, p. 1637-1643 7 p.Research output: Contribution to journal › Article › peer-review
1 Citation (Scopus) -
Reconstitution of the oocyte transcriptional network with transcription factors
Hamazaki, N., Kyogoku, H., Araki, H., Miura, F., Horikawa, C., Hamada, N., Shimamoto, S., Hikabe, O., Nakashima, K., Kitajima, T. S., Ito, T., Leitch, H. G. & Hayashi, K., Jan 14 2021, In: Nature. 589, 7841, p. 264-269 6 p.Research output: Contribution to journal › Article › peer-review
52 Citations (Scopus) -
Repression of germline genes by PRC1.6 and SETDB1 in the early embryo precedes DNA methylation-mediated silencing
Mochizuki, K., Sharif, J., Shirane, K., Uranishi, K., Bogutz, A. B., Janssen, S. M., Suzuki, A., Okuda, A., Koseki, H. & Lorincz, M. C., Dec 2021, In: Nature communications. 12, 1, 7020.Research output: Contribution to journal › Article › peer-review
Open Access7 Citations (Scopus) -
scRNA sequencing uncovers a TCF4-dependent transcription factor network regulating commissure development in mouse
Wittmann, M. T., Katada, S., Sock, E., Kirchner, P., Ekici, A. B., Wegner, M., Nakashima, K., Lie, D. C. & Reis, A., Jul 2021, In: Development (Cambridge). 148, 14, dev196022.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
SoxE group transcription factor Sox8 promotes astrocytic differentiation of neural stem/precursor cells downstream of Nfia
Takouda, J., Katada, S., Imamura, T., Sanosaka, T. & Nakashima, K., Dec 2021, In: Pharmacology Research and Perspectives. 9, 6, e00749.Research output: Contribution to journal › Article › peer-review
Open Access3 Citations (Scopus) -
The DNMT3A PWWP domain is essential for the normal DNA methylation landscape in mouse somatic cells and oocytes
Kibe, K., Shirane, K., Ohishi, H., Uemura, S., Toh, H. & Sasaki, H., May 28 2021, In: PLoS genetics. 17, 5, 1009570.Research output: Contribution to journal › Article › peer-review
Open Access7 Citations (Scopus) -
Transnasal transplantation of human induced pluripotent stem cell-derived microglia to the brain of immunocompetent mice
Parajuli, B., Saito, H., Shinozaki, Y., Shigetomi, E., Miwa, H., Yoneda, S., Tanimura, M., Omachi, S., Asaki, T., Takahashi, K., Fujita, M., Nakashima, K. & Koizumi, S., Oct 2021, In: GLIA. 69, 10, p. 2332-2348 17 p.Research output: Contribution to journal › Article › peer-review
Open Access7 Citations (Scopus) -
Type 1 helper T cells generate CXCL9/10-producing T-bet+ effector B cells potentially involved in the pathogenesis of rheumatoid arthritis
Nakayama, T., Yoshimura, M., Higashioka, K., Miyawaki, K., Ota, Y., Ayano, M., Kimoto, Y., Mitoma, H., Ono, N., Arinobu, Y., Kikukawa, M., Yamada, H., Akashi, K., Horiuchi, T. & Niiro, H., Feb 2021, In: Cellular Immunology. 360, 104263.Research output: Contribution to journal › Article › peer-review
7 Citations (Scopus) -
“Candidatus Mesenet longicola”: Novel Endosymbionts of Brontispa longissima that Induce Cytoplasmic Incompatibility
Takano, S. I., Gotoh, Y. & Hayashi, T., Aug 2021, In: Microbial Ecology. 82, 2, p. 512-522 11 p.Research output: Contribution to journal › Article › peer-review
8 Citations (Scopus)