Research Output 1978 2019

2019

A new species of gynochthodes (rubiaceae), g. honbaensis from hon ba nature reserve, southern Vietnam

Oguri, E., Tagane, S., Dang, V. S., Yang, C. J., Toyama, H., Tran, H., Murakami, N. & Yahara, T., Jun 18 2019, In : Phytotaxa. 406, 3, p. 213-217 5 p.

Research output: Contribution to journalArticle

Rubiaceae
nature reserve
Vietnam
conservation areas
Andaman and Nicobar Islands

Application of deep learning for the occupational health of VDT workers

Uchida, M., Noshita, K. & Koyama, H., Nov 25 2019, In : Sangyo eiseigaku zasshi = Journal of occupational health. 61, 6, p. 256-260 5 p.

Research output: Contribution to journalArticle

Open Access

Autophagy controls reactive oxygen species homeostasis in guard cells that is essential for stomatal opening

Yamauchi, S., Mano, S., Oikawa, K., Hikino, K., Teshima, K. M., Kimori, Y., Nishimura, M., Shimazaki, K. I. & Takemiya, A., Sep 17 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 38, p. 19187-19192 6 p.

Research output: Contribution to journalArticle

Open Access
Autophagy
Reactive Oxygen Species
Homeostasis
Peroxisomes
Arabidopsis

Comparison of shape quantification methods for genomic prediction, and genome-wide association study of sorghum seed morphology

Sakamoto, L., Kajiya-Kanegae, H., Noshita, K., Takanashi, H., Kobayashi, M., Kudo, T., Yano, K., Tokunaga, T., Tsutsumi, N. & Iwata, H., Jan 1 2019, In : PloS one. 14, 11, e0224695.

Research output: Contribution to journalArticle

Open Access
Sorghum
Genome-Wide Association Study
Sorghum (Poaceae)
Seed
Seeds
6 Citations (Scopus)

Continuous dynamic adjustment of the plant circadian oscillator

Webb, A. A. R., Seki, M., Satake, A. & Caldana, C., Dec 1 2019, In : Nature communications. 10, 1, 550.

Research output: Contribution to journalReview article

Physiology
Clocks
adjusting
oscillators
Plastics

Diversity and evolution of bacterial symbionts in the gut symbiotic organ of jewel stinkbugs (Hemiptera: Scutelleridae)

Hosokawa, T., Imanishi, M., Koga, R. & Fukatsu, T., Nov 1 2019, In : Applied Entomology and Zoology. 54, 4, p. 359-367 9 p.

Research output: Contribution to journalArticle

Scutelleridae
symbionts
Hemiptera
digestive system
Cydnidae
2 Citations (Scopus)

Drought and cool temperature cue general flowering synergistically in the aseasonal tropical forests of Southeast Asia

Satake, A., Chen, Y. Y., Fletcher, C. & Kosugi, Y., Jan 2019, In : Ecological Research. 34, 1, p. 40-49 10 p.

Research output: Contribution to journalArticle

South East Asia
tropical forests
tropical forest
flowering
drought
6 Citations (Scopus)

Epidermal growth factor receptor is a host-entry cofactor triggering hepatitis B virus internalization

Iwamoto, M., Saso, W., Sugiyama, R., Ishii, K., Ohki, M., Nagamori, S., Suzuki, R., Aizaki, H., Ryo, A., Yun, J. H., Park, S. Y., Ohtani, N., Muramatsu, M., Iwami, S., Tanaka, Y., Sureau, C., Wakita, T. & Watashi, K., Jan 1 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 17, p. 8487-8492 6 p.

Research output: Contribution to journalArticle

Virus Internalization
Epidermal Growth Factor Receptor
Hepatitis B virus
Virus Diseases
Peptides

Expression of genes and proteins involved in arsenic respiration and resistance in dissimilatory arsenate-reducing Geobacter sp. strain OR-1

Tsuchiya, T., Ehara, A., Kasahara, Y., Hamamura, N. & Amachi, S., Jul 2019, In : Applied and environmental microbiology. 85, 14, e00763-19.

Research output: Contribution to journalArticle

Geobacter
arsenates
Arsenic
arsenate
arsenic
1 Citation (Scopus)

Field transcriptome revealed a novel relationship between nitrate transport and flowering in Japanese beech

Satake, A., Kawatsu, K., Teshima, K., Kabeya, D. & Han, Q., Dec 1 2019, In : Scientific reports. 9, 1, 4325.

Research output: Contribution to journalArticle

Open Access
Fagus
Transcriptome
Nitrates
Florigen
Physiological Phenomena

FLORA of NAM KADING NATIONAL PROTECTED AREA VI: DIDYMOCARPUS MIDDLETONII (GESNERIACEAE), A NEW SPECIES from LIMESTONE

Souvannakhoummane, K., Souladeth, P., Tagane, S., Yang, C. J. & Yahara, T., Mar 1 2019, In : Edinburgh Journal of Botany. 76, 1, p. 45-54 10 p.

Research output: Contribution to journalReview article

Didymocarpus
Gesneriaceae
protected area
conservation areas
new species

Individual and sexual differences in time to habituate to food-stimuli presentation of potential prey in hyla japonica

Tanabe, S., Kasuya, E. & Miyatake, T., Feb 1 2019, In : Current Herpetology. 38, 1, p. 14-22 9 p.

Research output: Contribution to journalArticle

Hyla
Hylidae
linear models
gender
animals

Inferring the demographic history of Japanese cedar, Cryptomeria japonica, using amplicon sequencing

Moriguchi, N., Uchiyama, K., Miyagi, R., Moritsuka, E., Takahashi, A., Tamura, K., Tsumura, Y., Teshima, K. M., Tachida, H. & Kusumi, J., Jan 1 2019, In : Heredity. 123, 3, p. 371-383 13 p.

Research output: Contribution to journalArticle

Cryptomeria
History
Demography
Japan
Gene Flow
2 Citations (Scopus)

Mathematical Analysis of a Transformed ODE from a PDE Multiscale Model of Hepatitis C Virus Infection

Kitagawa, K., Kuniya, T., Nakaoka, S., Asai, Y., Watashi, K. & Iwami, S., May 15 2019, In : Bulletin of Mathematical Biology. 81, 5, p. 1427-1441 15 p.

Research output: Contribution to journalArticle

mathematical analysis
hepatitis
Multiscale Model
Hepatitis C virus
Virus Diseases
1 Citation (Scopus)

On the use of r and r squared in correlation and regression

Kasuya, E., Jan 2019, In : Ecological Research. 34, 1, p. 235-236 2 p.

Research output: Contribution to journalArticle

Phenology in the tropics: Physiological controls revealed by long-term monitoring and predictive models

Satake, A. & Kitajima, K., Jan 2019, In : Ecological Research. 34, 1, p. 18-19 2 p.

Research output: Contribution to journalArticle

phenology
tropics
monitoring

Population genetic analysis of two species of Distylium: D. racemosum growing in East Asian evergreen broad-leaved forests and D. lepidotum endemic to the Ogasawara (Bonin) Islands

Yagi, H., Xu, J., Moriguchi, N., Miyagi, R., Moritsuka, E., Sato, E., Sugai, K., Setsuko, S., Torimaru, T., Yamamoto, S. I., Takahashi, A., Tamura, K., Tachida, H., Teshima, K. M. & Kusumi, J., Dec 1 2019, In : Tree Genetics and Genomes. 15, 6, 77.

Research output: Contribution to journalArticle

Distylium
Distylium racemosum
broadleaved evergreen forests
broad-leaved forest
Tokyo

Quantitative comparison of flowering phenology traits among trees, perennial herbs, and annuals in a temperate plant community

Nagahama, A. & Yahara, T., Dec 1 2019, In : American Journal of Botany. 106, 12, p. 1545-1557 13 p.

Research output: Contribution to journalArticle

Open Access
phenology
herb
flowering
herbs
plant community

Revealing uninfected and infected target cell dynamics from peripheral blood data in highly and less pathogenic simian/human immunodeficiency virus infected Rhesus macaque

Hara, A., Iwanami, S., Ito, Y., Miura, T., Nakaoka, S. & Iwami, S., Oct 21 2019, In : Journal of Theoretical Biology. 479, p. 29-36 8 p.

Research output: Contribution to journalArticle

Simian immunodeficiency virus
Simian Immunodeficiency Virus
Human immunodeficiency virus
Macaca mulatta
Viruses
2 Citations (Scopus)

Synchronized expression of FLOWERING LOCUS T between branches underlies mass flowering in Fagus crenata

Satake, A., Kawatsu, K., Chiba, Y., Kitamura, K. & Han, Q., Jan 2019, In : Population Ecology. 61, 1, p. 5-13 9 p.

Research output: Contribution to journalArticle

Open Access
Fagus crenata
gene expression
flowering
synchrony
masting
1 Citation (Scopus)

The potential role of temperate Japanese regions as refugia for the coral Acropora hyacinthus in the face of climate change

Nakabayashi, A., Yamakita, T., Nakamura, T., Aizawa, H., Kitano, Y. F., Iguchi, A., Yamano, H., Nagai, S., Agostini, S., Teshima, K. & Yasuda, N., Dec 1 2019, In : Scientific reports. 9, 1, 1892.

Research output: Contribution to journalArticle

Open Access
Hyacinthus
Anthozoa
Climate Change
Coral Reefs
Population

UV bullseye contrast of Hemerocallis flowers attracts hawkmoths but not swallowtail butterflies

Hirota, S. K., Miki, N., Yasumoto, A. A. & Yahara, T., Jan 2019, In : Ecology and Evolution. 9, 1, p. 52-64 13 p.

Research output: Contribution to journalArticle

Hemerocallis
Papilionidae
butterfly
flower
flowers
2018

A new record of gastrodia albida T. C. Hsu & C. M. Kuo (Orchidaceae) from Yaku Island, Japan

Yahara, T. & Nakajima, M., Jan 1 2018, In : Acta Phytotaxonomica et Geobotanica. 69, 3, p. 203-208 6 p.

Research output: Contribution to journalArticle

Gastrodia
Orchidaceae
new record
Japan
lips

A new species and two new records of Quercus (Fagaceae) from northern Vietnam

Binh, H. T., Ngoc, N. V., Bon, T. N., Tagane, S., Suyama, Y. & Yahara, T., Jan 1 2018, In : PhytoKeys. 92, p. 1-15 15 p.

Research output: Contribution to journalArticle

Fagaceae
nut
nuts
Vietnam
new record
1 Citation (Scopus)

A PDE multiscale model of hepatitis C virus infection can be transformed to a system of ODEs

Kitagawa, K., Nakaoka, S., Asai, Y., Watashi, K. & Iwami, S., Jul 7 2018, In : Journal of Theoretical Biology. 448, p. 80-85 6 p.

Research output: Contribution to journalArticle

Multiscale Model
Hepatitis C virus
Virus Diseases
Viruses
System of Ordinary Differential Equations

Application of a deep learning for occupational health and safety recognition: a pilot study in a logistics industry

Uchida, M., Noshita, K., Tsutsui, Y. & Koyama, H., Dec 5 2018, In : Sangyo eiseigaku zasshi = Journal of occupational health. 60, 6, p. 191-195 5 p.

Research output: Contribution to journalArticle

Occupational Health
Industry
Learning
Recognition (Psychology)
1 Citation (Scopus)

A sensitive flower: mechanical stimulation induces rapid flower closure in Drosera spp. (Droseraceae)

Tagawa, K., Watanabe, M. & Yahara, T., Apr 1 2018, In : Plant Species Biology. 33, 2, p. 153-157 5 p.

Research output: Contribution to journalComment/debate

Droseraceae
Drosera
corolla
flower
flowers

A taxonomic study of Quercus langbianensis complex based on morphology and DNA barcodes of classic and next generation sequences

Binh, H. T., Ngoc, N. V., Tagane, S., Toyama, H., Mase, K., Mitsuyuki, C., Strijk, J. S., Suyama, Y. & Yahara, T., Feb 7 2018, In : PhytoKeys. 95, p. 37-70 34 p.

Research output: Contribution to journalArticle

DNA barcoding
Quercus
DNA
Cambodia
new species

Aversive Learning in the Praying Mantis (Tenodera aridifolia), a Sit and Wait Predator

Carle, T., Horiwaki, R., Hurlbert, A. & Yamawaki, Y., Mar 1 2018, In : Journal of Insect Behavior. 31, 2, p. 158-175 18 p.

Research output: Contribution to journalArticle

Tenodera aridifolia
Mantis
bee
Apoidea
learning
4 Citations (Scopus)

Characterization of peach tree crown by using high-resolution images from an unmanned aerial vehicle

Mu, Y., Fujii, Y., Takata, D., Zheng, B., Noshita, K., Honda, K., Ninomiya, S. & Guo, W., Dec 1 2018, In : Horticulture Research. 5, 1, 74.

Research output: Contribution to journalArticle

Orchards
Image resolution
Unmanned aerial vehicles (UAV)
Crowns
peaches
1 Citation (Scopus)
global warming
gene expression
flowering
plant response
mathematical models
1 Citation (Scopus)

Contributions to the Flora of Myanmar II: New records of eight woody species from Tanintharyi Region, Southern Myanmar

Tagane, S., Tanaka, N., Aung, M. M., Naiki, A. & Yahara, T., Oct 1 2018, In : Natural History Bulletin of the Siam Society. 63, 1, p. 47-56 10 p.

Research output: Contribution to journalArticle

Argyreia
Ardisia
Diospyros
Primulaceae
Convolvulaceae

Dynamics of HIV-1 coinfection in different susceptible target cell populations during cell-free infection

Ito, Y., Tauzin, A., Remion, A., Ejima, K., Mammano, F. & Iwami, S., Oct 14 2018, In : Journal of Theoretical Biology. 455, p. 39-46 8 p.

Research output: Contribution to journalArticle

Health Services Needs and Demand
Cell Population
Human immunodeficiency virus 1
Coinfection
mixed infection

Effects of apical damage on plant growth and male and female reproductive investments in Ambrosia artemisiifolia, a wind-pollinated plant

Nakahara, T., Fukano, Y. & Yahara, T., Jul 1 2018, In : Plant Ecology. 219, 7, p. 853-862 10 p.

Research output: Contribution to journalArticle

Ambrosia artemisiifolia
plant growth
damage
fitness
sex allocation

Effects of cyclic changes in population size on neutral genetic diversity

Nakamura, H., Teshima, K. & Tachida, H., Sep 2018, In : Ecology and Evolution. 8, 18, p. 9362-9371 10 p.

Research output: Contribution to journalArticle

population size
genetic variation
sampling
constancy
loci
1 Citation (Scopus)

Erythroxylum calyptratum (Erythroxylaceae), a new species from Mt. Fansipan, northern Vietnam

Komada, N., Tagane, S., Van Ngoc, N., Binh, H. T., Son, H. T., Toyama, H., Nagamasu, H., Naiki, A. & Yahara, T., Apr 20 2018, In : Phytotaxa. 347, 4, p. 279-284 6 p.

Research output: Contribution to journalArticle

Erythroxylaceae
Erythroxylum
Vietnam
corolla
flower
Cryptocercus darwini
Aradidae
colony structure
Blaberidae
cockroach
3 Citations (Scopus)

First record of the mycoheterotrophic orchid Lecanorchis taiwaniana from Nam Ha National Protected Area, Northern Laos

Suetsugu, K., Souladeth, P., Tagane, S. & Yahara, T., Jan 1 2018, In : Acta Phytotaxonomica et Geobotanica. 69, 2, p. 139-141 3 p.

Research output: Contribution to journalArticle

Laos
protected area
conservation areas
flowering
Taiwan

Five new species of syzygium (Myrtaceae) from Indochina and Thailand

Tagane, S., Dang, V. S., Souladeth, P., Nagamasu, H., Toyama, H., Naiki, A., Fuse, K., Tran, H., Yang, C. J., Prajaksood, A. & Yahara, T., Jan 1 2018, In : Phytotaxa. 375, 4, p. 247-260 14 p.

Research output: Contribution to journalArticle

Indochina
Syzygium
Myrtaceae
Thailand
conservation areas
5 Citations (Scopus)

Flora of bokor national park VII: Thismia bokorensis (burmanniaceae), a new species representing a new generic record

Suetsugu, K., Tsukaya, H., Tagane, S., Chhang, P., Yukawa, T. & Yahara, T., Jan 12 2018, In : Phytotaxa. 334, 1, p. 65-69 5 p.

Research output: Contribution to journalLetter

Burmanniaceae
tribal peoples
tropical rain forests
South East Asia
new record
7 Citations (Scopus)

Flora of nam kading national protected area II: 30 new records of angiosperms for Laos

Tagane, S., Souladeth, P., Rueangruea, S., Okabe, N., Zhang, M., Chayer, S., Yang, C. J. & Yahara, T., Mar 1 2018, In : Edinburgh Journal of Botany. 75, 1, p. 107-116 10 p.

Research output: Contribution to journalReview article

Laos
angiosperm
new record
protected area
Angiospermae
7 Citations (Scopus)

Flora of nam kading national protected area III: Begonia namkadingensis (Begoniaceae), a new species in limestone area

Yang, C. J., Tagane, S., Souladeth, P., Okabe, N., Hu, J. M. & Yahara, T., Jan 16 2018, In : Phytotaxa. 334, 2, p. 195-199 5 p.

Research output: Contribution to journalLetter

Begoniaceae
Begonia
limestone
protected area
conservation areas
4 Citations (Scopus)

Flora of Nam Kading national protected area IV: Two new species of annonaceae, Monoon namkadingense and Neo-uvaria laosensis

Tagane, S., Souladeth, P., Zhang, M. & Yahara, T., Jan 26 2018, In : Phytotaxa. 336, 1, p. 82-88 7 p.

Research output: Contribution to journalArticle

Uvaria
Annonaceae
protected area
conservation areas
flora
3 Citations (Scopus)

Gene regulatory network models in response to sugars in the plant circadian system

Ohara, T., Hearn, T. J., Webb, A. A. R. & Satake, A., Nov 14 2018, In : Journal of Theoretical Biology. 457, p. 137-151 15 p.

Research output: Contribution to journalArticle

Gene Regulatory Networks
Gene Regulatory Network
Sugars
Sugar (sucrose)
Network Model
2 Citations (Scopus)

Gentiana laotica, a new species of Gentianaceae from Laos

Souladeth, P., Tagane, S., Naiki, A., Nagamasu, H. & Yahara, T., Jan 3 2018, In : Thai Forest Bulletin (Botany). 46, 1, p. 72-75 4 p.

Research output: Contribution to journalArticle

Gentianaceae
Gentiana
Laos
new species
common names

Horizontal transmission of symbiotic green algae between hydra strains

Miyokawa, R. Y. O., Tsuda, T., Kanaya, H. J., Kusumi, J., Tachida, H. & Kobayakawa, Y., Jan 1 2018, In : Archives of American Art Journal. 235, 2, p. 113-122.

Research output: Contribution to journalArticle

Symbiosis
Sphaerophoria
Drosera
carnivorous plants
Syrphidae
traps
9 Citations (Scopus)

Human-Specific Adaptations in Vpu Conferring Anti-tetherin Activity Are Critical for Efficient Early HIV-1 Replication In Vivo

Yamada, E., Nakaoka, S., Klein, L., Reith, E., Langer, S., Hopfensperger, K., Iwami, S., Schreiber, G., Kirchhoff, F., Koyanagi, Y., Sauter, D. & Sato, K., Jan 10 2018, In : Cell Host and Microbe. 23, 1, p. 110-120.e7

Research output: Contribution to journalArticle

HIV-1
Interferons
HIV Infections
Mutation
Proteins
5 Citations (Scopus)

Influence of the chemical form of antimony on soil microbial community structure and arsenite oxidation activity

Kataoka, T., Mitsunobu, S. & Hamamura, N., Jan 1 2018, In : Microbes and Environments. 33, 2, p. 214-221 8 p.

Research output: Contribution to journalArticle

antimony
arsenites
arsenite
microbial communities
microbial community
3 Citations (Scopus)

Interactions between immunotoxicants and parasite stress: Implications for host health

Booton, R. D., Yamaguchi, R., Marshall, J. A. R., Childs, D. Z. & Iwasa, Y., May 14 2018, In : Journal of Theoretical Biology. 445, p. 120-127 8 p.

Research output: Contribution to journalArticle

Toxicants
toxic substances
Parasites
Health
Bees