Research Output 1976 2020

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Comment/debate
2019

Author Correction: Diversity in gut bacterial community of school-age children in Asia (Scientific Reports, (2015), 5, 1, (8397), 10.1038/srep08397)

Nakayama, J., Watanabe, K., Jiang, J., Matsuda, K., Chao, S. H., Haryono, P., La-ongkham, O., Sarwoko, M. A., Sujaya, I. N., Zhao, L., Chen, K. T., Chen, Y. P., Chiu, H. H., Hidaka, T., Huang, N. X., Kiyohara, C., Kurakawa, T., Sakamoto, N., Sonomoto, K., Tashiro, K. & 9 others, Tsuji, H., Chen, M. J., Leelavatcharamas, V., Liao, C. C., Nitisinprasert, S., Rahayu, E. S., Ren, F. Z., Tsai, Y. C. & Lee, Y. K., Dec 1 2019, In : Scientific reports. 9, 1, 6530.

Research output: Contribution to journalComment/debate

Open Access

Constitutive expression of phosphoketolase, a key enzyme for metabolic shift from homo- to heterolactic fermentation in Enterococcus mundtii QU 25

Nabeta, K., Watanabe, S., Chibazakura, T., Zendo, T., Sonomoto, K., Shimizu-Kadota, M. & Yoshikawa, H., Jan 1 2019, In : Bioscience of Microbiota, Food and Health. 38, 3, p. 111-114 4 p.

Research output: Contribution to journalComment/debate

Open Access
phosphoketolase
Enterococcus mundtii
Enterococcus
Homo
Fermentation
Open Access
Anguilla japonica
Anguilla anguilla
eel
habitat preferences
habitat selection
Open Access
chlorophyll

Correction to: Genetic diversity and genetic variation in morpho-physiological traits to improve heat tolerance in Spring barley (Molecular Biology Reports, (2018), 45, 6, (2441-2453), 10.1007/s11033-018-4410-6)

Sallam, A., Amro, A., Elakhdar, A., Dawood, M. F. A., Kumamaru, T. & Stephen Baenziger, P., Apr 1 2019, In : Molecular biology reports. 46, 2, 1 p.

Research output: Contribution to journalComment/debate

Hordeum
Molecular Biology
Japan
Research
Thermotolerance

Development of introgression lines of aa genome oryza species, o. Glaberrima, o. rufipogon, and o. nivara, in the genetic background of o. sativa l. cv. taichung 65

Yamagata, Y., Win, K. T., Miyazaki, Y., Ogata, C., Yasui, H. & Yoshimura, A., Jan 1 2019, In : Breeding Science. 69, 2, p. 359-363 5 p.

Research output: Contribution to journalComment/debate

Open Access
Oryza
introgression
substitution lines
genetic background
Genome

Dried watermelon rind mash diet increases plasma l -citrulline level in chicks

Nguyen, L. T. N., Han, G., Yang, H., Ikeda, H., Eltahan, H. M., Surchowdhury, V. & Furuse, M., Jan 1 2019, In : Journal of Poultry Science. 56, 1, p. 65-70 6 p.

Research output: Contribution to journalComment/debate

Open Access
citrulline
mash
watermelons
powders
chicks

Forefront studies on the life history of Conger myriaster and management of its fisheries resource

Mochioka, N., Katayama, S., Kurogi, H. & Tokai, T., Jan 1 2019, In : Nippon Suisan Gakkaishi (Japanese Edition). 85, 1, 1 p.

Research output: Contribution to journalComment/debate

Conger myriaster
fishery resources
life history
fishery resource

I-3. Biology of leptocephalus larvae

Mochioka, N., Jan 1 2019, In : Nippon Suisan Gakkaishi (Japanese Edition). 85, 1, 1 p.

Research output: Contribution to journalComment/debate

larva
Biological Sciences
leptocephalus larvae

Oral administration of a medium containing L-citrulline-producing live bacteria reduces body temperature in chicks

Tran, P. V., Do, P. H., Han, G., Bahry, M. A., Yang, H., Chowdhury, V. S. & Furuse, M., Jan 1 2019, In : Journal of Poultry Science. 56, 4, p. 285-289 5 p.

Research output: Contribution to journalComment/debate

Open Access
2018
9 Citations (Scopus)

Are Peptides Absorbable Compounds?

Matsui, T., Jan 17 2018, In : Journal of Agricultural and Food Chemistry. 66, 2, p. 393-394 2 p.

Research output: Contribution to journalComment/debate

Biological Availability
Intestines
Mass Spectrometry
intestines
cell lines

Correction: Novel lysophospholipid acyltransferase plat1 of aurantiochytrium limacinum f26-b responsible for generation of palmitate-docosahexaenoate-phosphatidylcholine and phosphatidylethanolamine (PLoS ONE (2014) 9: 8 (e102377) DOI: 10.1371/journal.pone.0102377)

Abe, E., Ikeda, K., Nutahara, E., Hayashi, M., Yamashita, A., Taguchi, R., Doi, K., Honda, D., Okino, N. & Ito, M., Aug 1 2018, In : PloS one. 13, 8, e0203016.

Research output: Contribution to journalComment/debate

1-Acylglycerophosphocholine O-Acyltransferase
acyltransferases
Docosahexaenoic Acids
Palmitates
palmitates
fishery science
peroxides
lipid
cell lines
fisheries

Substrate specificity of Nudix hydrolases from Myxococcus xanthus

Kimura, Y., Yamamoto, Y., Kajimoto, S., Sakai, A. & Takegawa, K., Jan 1 2018, In : Journal of General and Applied Microbiology. 64, 2, p. 94-98 5 p.

Research output: Contribution to journalComment/debate

Myxococcus xanthus
Substrate Specificity
nudix hydrolases
2017
5' Untranslated Regions
5' untranslated regions
luciferase
Luciferases
Sulfur
2 Citations (Scopus)

Asian gut microbiome

Nakayama, J., Zhang, H. & Lee, Y. K., Jun 30 2017, In : Science Bulletin. 62, 12, p. 816-817 2 p.

Research output: Contribution to journalComment/debate

Cellulose gels unlike common gels - From the viewpoint of structures and properties of networks

Tatsumi, D., 2017, In : Sen'i Gakkaishi. 73, 5, p. 206 1 p.

Research output: Contribution to journalComment/debate

Cellulose
Gels
2 Citations (Scopus)

Corrigendum: Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.)

Mori, K., Shirasawa, K., Nogata, H., Hirata, C., Tashiro, K., Habu, T., Kim, S., Himeno, S., Kuhara, S. & Ikegami, H., May 10 2017, In : Scientific reports. 7, 1 p.

Research output: Contribution to journalComment/debate

Open Access

Erratum to: Biodegradation of Aldrin and Dieldrin by the White-Rot Fungus Pleurotus ostreatus (Current Microbiology, (2017), 74, 3, (320-324), 10.1007/s00284-016-1184-8)

Purnomo, A. S., Nawfa, R., Martak, F., Shimizu, K. & Kamei, I., Jul 1 2017, In : Current Microbiology. 74, 7, 1 p.

Research output: Contribution to journalComment/debate

Aldrin
Dieldrin
Pleurotus
Microbiology
Fungi
Fallopia japonica
Biological Control Agents
Biotechnology
Publications
Assays

Fed-batch fermentation for enhanced lactic acid production from glucose/xylose mixture without carbon catabolite repression

Abdel-Rahman, M. A., Xiao, Y. & Wang, Y., 2017, In : Seibutsu-kogaku Kaishi. 95, 2, p. 73 1 p.

Research output: Contribution to journalComment/debate

Catabolite Repression
batch fermentation
xylose
lactic acid
Fermentation
fructokinase
Fructose
Rats
Glycolysis

Surface design of amphiphilic cellulose nano-materials

Yokota, S., Jan 1 2017, In : Journal of Fiber Science and Technology. 73, 5, 1 p.

Research output: Contribution to journalComment/debate

Cellulose
2016

Erratum to: Japanese traditional dietary fungus koji Aspergillus oryzae functions as a prebiotic for Blautia coccoides through glycosylceramide: Japanese dietary fungus koji is a new prebiotic (SpringerPlus, (2016), 5, (1321), 10.1186/s40064-016-2950-6)

Hamajima, H., Matsunaga, H., Fujikawa, A., Sato, T., Mitsutake, S., Yanagita, T., Nagao, K., Nakayama, J. & Kitagaki, H., Dec 1 2016, In : SpringerPlus. 5, 1, 1869.

Research output: Contribution to journalComment/debate

Aspergillus oryzae
Prebiotics
Chloroform
Acetone
Publications
Cellulose
Crystal lattices
Wood
Fibers
Direction compound

Erratum to: Transcriptome sequencing and profiling of expressed genes in cambial zone and differentiating xylem of Japanese cedar (Cryptomeria japonica)[BMC Genomics, 15, (2014) (219)], DOI: 10.1186/1471-2164-15-219

Mishima, K., Fujiwara, T., Iki, T., Kuroda, K., Yamashita, K., Tamura, M., Fujisawa, Y. & Watanabe, A., Oct 17 2016, In : BMC Genomics. 17, 1, 803.

Research output: Contribution to journalComment/debate

Cryptomeria
Xylem
Gene Expression Profiling
Genomics
Publications
5 Citations (Scopus)

Induction of tetraploid hardy rubber tree, Eucommia ulmoides, and phenotypic differences from diploid

Tokumoto, Y., Kajiura, H., Takeno, S., Harada, Y., Suzuki, N., Hosaka, T., Gyokusen, K. & Nakazawa, Y., Apr 22 2016, In : Plant Biotechnology. 33, 1, p. 51-57 7 p.

Research output: Contribution to journalComment/debate

Eucommiaceae
Hevea
Eucommia ulmoides
Tetraploidy
Hevea brasiliensis
1 Citation (Scopus)

In vitro culture and low temperature incubation tolerance of staged embryos of the silkworm, Bombyx mori

Fukumori, H., Fujii, T. & Banno, Y., Jan 1 2016, In : Journal of Insect Biotechnology and Sericology. 85, 2, p. 49-53 5 p.

Research output: Contribution to journalComment/debate

Bombyx
embryo culture
Cryopreservation
Bombyx mori
silkworms
Glycosphingolipids
Biosynthesis
Viruses
Infection
Glycosphingolipids
Biosynthesis
Viruses
Infection
2015
genetic variation
Picea
microsatellite repeats
Japan
marker

Erratum to: De novo sequencing and comparative analysis of expressed sequence tags from gynodioecious fig (Ficus carica L.) fruits: caprifig and common fig [Tree Genetics & Genomes, 9, (2013), 1075-1088, DOI:10.1007/s11295-013-0622-z]

Ikegami, H., Habu, T., Mori, K., Nogata, H., Hirata, C., Hirashima, K., Tashiro, K. & Kuhara, S., Dec 1 2015, In : Tree Genetics and Genomes. 11, 6, 1 p., 132.

Research output: Contribution to journalComment/debate

2 Citations (Scopus)
Shiga-Toxigenic Escherichia coli
Cytotoxins
Escherichia coli
Genes
DNA Sequence Analysis
2014
Arches
Crystal structure
carbonyl reductase (NADPH)

Erratum: Catalyser-21™, a mineral water derived from leaf soil, inhibits tumor cell invasion and angiogenesis (Cytotechnology (2007) 55 (61-70) (DOI 10.1007/s10616-007-9073-4))

Ye, J., Li, Y., Hamasaki, T., Nakamichi, N., Kawahara, T., Osada, K., Teruya, K., Kato, Y., Toh, K., Abe, M., Katakura, Y., Noguchi, K. & Shirahata, S., Mar 1 2014, In : Cytotechnology. 66, 2, p. 355-356 2 p.

Research output: Contribution to journalComment/debate

Mineral Waters
Tumors
Soil
Minerals
Cells

Remote sensing of vegetation

Kume, A., Jan 1 2014, In : Japanese Journal of Ecology. 64, 3, p. 201-204 4 p.

Research output: Contribution to journalComment/debate

remote sensing
vegetation
2013
6 Citations (Scopus)

Construction of a ligD disruptant for efficient gene targeting in white koji mold, aspergillus kawachii

Tashiro, S., Futagami, T., Wada, S., Kajiwara, Y., Takashita, H., Omori, T., Takahashi, T., Yamada, O., Takegawa, K. & Goto, M., Jul 30 2013, In : Journal of General and Applied Microbiology. 59, 3, p. 257-260 4 p.

Research output: Contribution to journalComment/debate

Microbial Genetics
Gene Knockout Techniques
Fungal Proteins
Gene Targeting
Homologous Recombination
Cell Aging
Biotechnology
Transforming Growth Factor beta
Biochemistry
Neoplasms
Cupressus lusitanica
Cupressus
Monoterpenes
Biological Products
epoxides
Biochemistry
Bombyx
Biotechnology
Pseudomonas aeruginosa
Virulence

Erratum: Green tea and coffee consumption is inversely associated with depressive symptoms in a Japanese working population (Public Health Nutrition (2013) DOI: 10.1017/S1368980013000360)

Pham, N. M., Nanri, A., Kurotani, K., Kuwahara, K., Kume, A., Sato, M., Hayabuchi, H. & Mizoue, T., Jan 1 2013, In : Public Health Nutrition. 17, 3, 1 p.

Research output: Contribution to journalComment/debate

Erratum to: Video observation of an eel in the Anguilla japonica spawning area along the West Mariana Ridge (Fish Sci, (2013), 79, (407-416), 10.1007/s12562-013-0611-z)

Tsukamoto, K., Mochioka, N., Miller, M. J., Koyama, S., Watanabe, S. & Aoyama, J., Jul 1 2013, In : Fisheries science. 79, 4, 1 p.

Research output: Contribution to journalComment/debate

Anguilla japonica
eel
spawning
fish
video
2012
36 Citations (Scopus)

Complete genome sequence of Lactococcus lactis IO-1, a lactic acid bacterium that utilizes xylose and produces high levels of l-lactic acid

Kato, H., Shiwa, Y., Oshima, K., Machii, M., Araya-Kojima, T., Zendo, T., Shimizu-Kadota, M., Hattori, M., Sonomoto, K. & Yoshikawa, H., Apr 1 2012, In : Journal of bacteriology. 194, 8, p. 2102-2103 2 p.

Research output: Contribution to journalComment/debate

Lactococcus lactis
Xylose
Lactic Acid
Genome
Bacteria

Erratum: Suppression of UVC-induced cell damage and enhancement of DNA repair by the fermented milk, Kefir (Cytotechnology (2002) 40 (125-137) DOI:10.1023/A:1023984304610)

Nagira, T., Narisawa, J., Teruya, K., Katakura, Y., Shim, S. Y., Kusumoto, K. I., Tokumaru, S., Tokumaru, K., Barnes, D. W. & Shirahata, S., Jan 1 2012, In : Cytotechnology. 64, 1, 1 p.

Research output: Contribution to journalComment/debate

Fermented milk
Repair
Cells
DNA
Corbicula
Sphingomyelins
Bivalvia
Molecular Cloning
Carrier Proteins
Pinus pumila
fog
interception
Arctic region
canopy
1 Citation (Scopus)
diaminopimelate dehydrogenase
Site-Directed Mutagenesis
NADP
Oxidoreductases
Amino Acids
24 Citations (Scopus)

Extended linkage disequilibrium in noncoding regions in a conifer, Cryptomeria Japonica

Moritsuka, E., Hisataka, Y., Tamura, M., Uchiyama, K., Watanabe, A., Tsumura, Y. & Tachida, H., Mar 1 2012, In : Genetics. 190, 3, p. 1145-1148 4 p.

Research output: Contribution to journalComment/debate

Cryptomeria
Coniferophyta
Linkage Disequilibrium
Genetic Recombination
Cupressaceae
10 Citations (Scopus)

Genome sequence of Pantoea agglomerans strain IG1

Matsuzawa, T., Mori, K., Kadowaki, T., Shimada, M., Tashiro, K., Kuhara, S., Inagawa, H., Soma, G. I. & Takegawa, K., Mar 1 2012, In : Journal of bacteriology. 194, 5, p. 1258-1259 2 p.

Research output: Contribution to journalComment/debate

Pantoea
Genome
Lipopolysaccharides
Virus Diseases
Gram-Negative Bacteria