Research Output 1984 2019

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2019

Are microtubules tension sensors?

Hamant, O., Inoue, D., Bouchez, D., Dumais, J. & Mjolsness, E., Dec 1 2019, In : Nature communications. 10, 1, 2360.

Research output: Contribution to journalArticle

Open Access
Mechanical Stress
Microtubules
Developmental Biology
sensors
Sensors

C. elegans collectively forms dynamical networks

Sugi, T., Ito, H., Nishimura, M. & Nagai, K. H., Dec 1 2019, In : Nature communications. 10, 1, 683.

Research output: Contribution to journalArticle

Open Access
Caenorhabditis elegans
Animals
Optogenetics
Animal Behavior
Physics
1 Citation (Scopus)

Search acceleration of evolutionary multi-objective optimization using an estimated convergence point

Pei, Y., Yu, J. & Takagi, H., Jan 28 2019, In : Mathematics. 7, 2, 129.

Research output: Contribution to journalArticle

Open Access
Evolutionary multiobjective Optimization
Pareto
Pareto Solutions
Parameter Space
Unimodal Distribution
2018

Construction of artificial cilia from microtubules and kinesins through a well-designed bottom-up approach

Sasaki, R., Kabir, A. M. R., Inoue, D., Anan, S., Kimura, A. P., Konagaya, A., Sada, K. & Kakugo, A., Apr 14 2018, In : Nanoscale. 10, 14, p. 6323-6332 10 p.

Research output: Contribution to journalArticle

Kinesin
Hydrolysis
Actuators
Tuning
Adenosine Triphosphate

Determining the minimum number of protein-protein interactions required to support known protein complexes

Nakajima, N., Hayashida, M., Jansson, J., Maruyama, O. & Akutsu, T., Apr 2018, In : PloS one. 13, 4, e0195545.

Research output: Contribution to journalArticle

protein-protein interactions
Proteins
proteins
prediction
social networks
1 Citation (Scopus)

Research progress survey on interactive evolutionary computation

Pei, Y. & Takagi, H., May 23 2018, (Accepted/In press) In : Journal of Ambient Intelligence and Humanized Computing. p. 1-14 14 p.

Research output: Contribution to journalArticle

Evolutionary algorithms
Fatigue of materials
Multiobjective optimization
2017
13 Citations (Scopus)

Adjustment of the Arabidopsis circadian oscillator by sugar signalling dictates the regulation of starch metabolism

Seki, M., Ohara, T., Hearn, T. J., Frank, A., Da Silva, V. C. H., Caldana, C., Webb, A. A. R. & Satake, A., Dec 1 2017, In : Scientific reports. 7, 1, 8305.

Research output: Contribution to journalArticle

Arabidopsis
starch
sugars
metabolism
sucrose
2 Citations (Scopus)

Administration of gonadotropin-releasing hormone agonist on day 5 increases luteal blood flow and improves pregnancy prediction accuracy on day 14 in recipient holstein cows

Kanazawa, T., Seki, M., Ishiyama, K., Araseki, M., Izaike, Y. & Takahashi, T., Jan 1 2017, In : Journal of Reproduction and Development. 63, 4, p. 389-399 11 p.

Research output: Contribution to journalArticle

hormone agonists
gonadotropin-releasing hormone
corpus luteum
blood flow
Holstein
3 Citations (Scopus)

Evolving fuzzy logic rule-based game player model for game development

Vorachart, V. & Takagi, H., Dec 1 2017, In : International Journal of Innovative Computing, Information and Control. 13, 6, p. 1941-1951 11 p.

Research output: Contribution to journalArticle

Fuzzy Logic
Fuzzy logic
Game
Fuzzy Logic System
Model
8 Citations (Scopus)

Low temperature nullifies the circadian clock in cyanobacteria through Hopf bifurcation

Murayama, Y., Kori, H., Oshima, C., Kondo, T., Iwasaki, H. & Ito, H., May 30 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 22, p. 5641-5646 6 p.

Research output: Contribution to journalArticle

Circadian Clocks
Cyanobacteria
Temperature
Circadian Rhythm
Phosphorylation

Motility of Microtubules on the Inner Surface of Water-in-Oil Emulsion Droplets

Tsuji, M., Rashedul Kabir, A. M., Ito, M., Inoue, D., Kokado, K., Sada, K. & Kakugo, A., Oct 31 2017, In : Langmuir. 33, 43, p. 12108-12113 6 p.

Research output: Contribution to journalArticle

locomotion
Emulsions
emulsions
Oils
oils

Understanding the emergence of collective motion of microtubules driven by kinesins: role of concentration of microtubules and depletion force

Saito, A., Farhana, T. I., Kabir, A. M. R., Inoue, D., Konagaya, A., Sada, K. & Kakugo, A., Jan 1 2017, In : RSC Advances. 7, 22, p. 13191-13197 7 p.

Research output: Contribution to journalArticle

Open Access
Kinesin
Kinetics
2016
8 Citations (Scopus)
Altruism
Gossip
altruism
Model
Game
10 Citations (Scopus)

Effect of Multiple Clock Gene Ablations on the Circadian Period Length and Temperature Compensation in Mammalian Cells

Tsuchiya, Y., Umemura, Y., Minami, Y., Koike, N., Hosokawa, T., Hara, M., Ito, H., Inokawa, H. & Yagita, K., Feb 1 2016, In : Journal of Biological Rhythms. 31, 1, p. 48-56 9 p.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
Circadian Clocks
Temperature
Embryonic Stem Cells
Circadian Rhythm

Enhanced dynamic instability of microtubules in a ROS free inert environment

Islam, M. S., Kabir, A. M. R., Inoue, D., Sada, K. & Kakugo, A., Apr 2016, In : Biophysical Chemistry. 211, p. 1-8 8 p.

Research output: Contribution to journalArticle

Microtubules
Reactive Oxygen Species
Biological Phenomena
Growth
In Vitro Techniques
2 Citations (Scopus)

Florigen distribution determined by a source-sink balance explains the diversity of inflorescence structures in Arabidopsis

Satake, A., Seki, M., Iima, M., Teramoto, T. & Nishiura, Y., Apr 21 2016, In : Journal of Theoretical Biology. 395, p. 227-237 11 p.

Research output: Contribution to journalArticle

Florigen
florigen
Arabidopsis
Inflorescence
Sugar (sucrose)
plant breeding
ecophysiology
crop plant
phloem
hypothesis testing
12 Citations (Scopus)

Pregnancy prediction on the day of embryo transfer (Day 7) and Day 14 by measuring luteal blood flow in dairy cows

Kanazawa, T., Seki, M., Ishiyama, K., Kubo, T., Kaneda, Y., Sakaguchi, M., Izaike, Y. & Takahashi, T., Feb 28 2016, In : Theriogenology. 86, 6, p. 1436-1444 9 p.

Research output: Contribution to journalArticle

Embryo Transfer
Corpus Luteum
embryo transfer
corpus luteum
blood flow

Visualizing similarity of appearance by arrangement of cards

Nakatsuji, N., Ihara, H., Seno, T. & Ito, H., Jan 1 2016, In : Frontiers in Psychology. 7, MAY, 698.

Research output: Contribution to journalArticle

Psychology
Posters
2015

Buckling of Microtubules on a 2D Elastic Medium

Kabir, A. M. R., Inoue, D., Afrin, T., Mayama, H., Sada, K. & Kakugo, A., Nov 24 2015, In : Scientific reports. 5, 17222.

Research output: Contribution to journalArticle

Open Access
Microtubules
Microtubule-Associated Proteins
Kinesin
Mechanical Stress

Discrete and ultradiscrete models for biological rhythms comprising a simple negative feedback loop

Gibo, S. & Ito, H., Aug 7 2015, In : Journal of Theoretical Biology. 378, p. 89-95 7 p.

Research output: Contribution to journalArticle

biological rhythms
Negative Feedback
Feedback Loop
Periodicity
Feedback
5 Citations (Scopus)

Effectiveness of approximation strategy in surrogate-assisted fireworks algorithm

Pei, Y., Zheng, S., Tan, Y. & Takagi, H., Oct 21 2015, In : International Journal of Machine Learning and Cybernetics. 6, 5, p. 795-810 16 p.

Research output: Contribution to journalArticle

Sampling
Interpolation
Least squares approximations
Statistical tests
Extrapolation

Effect of length and rigidity of microtubules on the size of ring-shaped assemblies obtained through active self-organization

Wada, S., Rashedul Kabir, A. M., Ito, M., Inoue, D., Sada, K. & Kakugo, A., Feb 14 2015, In : Soft Matter. 11, 6, p. 1151-1157 7 p.

Research output: Contribution to journalArticle

rigidity
Rigidity
assemblies
filaments
rings
5 Citations (Scopus)

Interactive evolutionary computation for analyzing human characteristics

Takagi, H., Jan 1 2015, In : Advances in Intelligent Systems and Computing. 316, p. 189-195 7 p.

Research output: Contribution to journalArticle

Evolutionary algorithms
Cochlear implants
Hearing aids

Vection is unaffected by circadian rhythm

Ogawa, M., Ito, H. & Senoo, T., 2015, In : Psychology.

Research output: Contribution to journalArticle

2014
1 Citation (Scopus)

Equilibrium frequency of endosymbionts in multiple infections based on the balance between vertical transmission and cytoplasmic incompatibility

Kawasaki, Y., Ito, H. & Kajimura, H., Apr 18 2014, In : PloS one. 9, 4, e94900.

Research output: Contribution to journalArticle

cytoplasmic incompatibility
endosymbionts
Difference equations
Infection
infection
17 Citations (Scopus)

Regulation of the cyanobacterial circadian clock by electrochemically controlled extracellular electron transfer

Lu, Y., Nishio, K., Matsuda, S., Toshima, Y., Ito, H., Konno, T., Ishihara, K., Kato, S., Hashimoto, K. & Nakanishi, S., Feb 17 2014, In : Angewandte Chemie - International Edition. 53, 8, p. 2208-2211 4 p.

Research output: Contribution to journalArticle

Circadian Clocks
Clocks
Oxidation-Reduction
Electrons
Electrodes
2013
14 Citations (Scopus)

Accelerating IEC and EC searches with elite obtained by dimensionality reduction in regression spaces

Pei, Y. & Takagi, H., Jun 1 2013, In : Evolutionary Intelligence. 6, 1, p. 27-40 14 p.

Research output: Contribution to journalArticle

Interactive Evolutionary Computation
Dimensionality Reduction
Evolutionary Computation
Evolutionary algorithms
Regression
2009
12 Citations (Scopus)

Analysis and modeling of naturalness in handwritten characters

Dolinský, J. & Takagi, H., Aug 31 2009, In : IEEE Transactions on Neural Networks. 20, 10, p. 1540-1553 14 p.

Research output: Contribution to journalArticle

Linear Models
Recurrent neural networks
Stroke
Nonlinear Dynamics
Feedforward neural networks
2 Citations (Scopus)
Multiobjective optimization
Planning
Evolutionary algorithms
Visualization
Concretes
34 Citations (Scopus)

Nonparametric entrainment of the in vitro circadian phosphorylation rhythm of cyanobacterial KaiC by temperature cycle

Yoshida, T., Murayama, Y., Ito, H., Kageyama, H. & Kondo, T., Feb 3 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 5, p. 1648-1653 6 p.

Research output: Contribution to journalArticle

Circadian Rhythm
Phosphorylation
Temperature
In Vitro Techniques
Proteins
2008
68 Citations (Scopus)

Ergonomic chair design by fusing qualitative and quantitative criteria using interactive genetic algorithms

Brintrup, A. M., Ramsden, J., Takagi, H. & Tiwari, A., Dec 1 2008, In : IEEE Transactions on Evolutionary Computation. 12, 3, p. 343-354 12 p.

Research output: Contribution to journalArticle

Interactive Genetic Algorithm
Ergonomics
Genetic algorithms
User Evaluation
User Satisfaction
2007
58 Citations (Scopus)

Interactive evolutionary computation-based hearing aid fitting

Takagi, H. & Ohsaki, M., Jun 1 2007, In : IEEE Transactions on Evolutionary Computation. 11, 3, p. 414-427 14 p.

Research output: Contribution to journalArticle

Interactive Evolutionary Computation
Hearing aids
Audition
Evolutionary algorithms
Speech intelligibility

Measurement of bone conduction characteristics for transmitted vibration sounds of tooth drilling

Ozaki, M., Baba, A., Ishii, K., Takagi, H. & Motokawa, W., Jan 1 2007, In : pediatric dental journal. 17, 2, p. 148-155 8 p.

Research output: Contribution to journalArticle

Bone Conduction
Vibration
Tooth
Air
Head
2005
16 Citations (Scopus)
fatigue
Evolutionary algorithms
Fatigue
Fatigue of materials
Benchmarking
10 Citations (Scopus)

Proposal for a framework for optimizing artificial environments based on physiological feedback

Takagi, H., Wang, S. & Nakano, S., Jan 1 2005, In : Journal of physiological anthropology and applied human science. 24, 1, p. 77-80 4 p.

Research output: Contribution to journalArticle

Physiological Feedback
Inverse problems
Feedback
Evolutionary algorithms
Vibration
2004
56 Citations (Scopus)
Interactive Evolutionary Computation
Micro-Electrical-Mechanical Systems
Evolutionary multiobjective Optimization
Multiobjective optimization
Micro-electro-mechanical Systems
19 Citations (Scopus)
Environment Design
virtual reality
Virtual reality
illness
Angular velocity
2003
12 Citations (Scopus)

Tuning of image parameters by interactive evolutionary computation

Jakša, R. & Takagi, H., 2003, In : Unknown Journal. 1, p. 492-497 6 p.

Research output: Contribution to journalArticle

Image enhancement
Evolutionary algorithms
Tuning
filter
parameter
2002
18 Citations (Scopus)

Acceleration of EC convergence with landscape visualization and human intervention

Hayashida, N. & Takagi, H., Jul 2 2002, In : Applied Soft Computing. 1, 4, p. 245-256 12 p.

Research output: Contribution to journalArticle

Evolutionary algorithms
Visualization
Self organizing maps
2001
2 Citations (Scopus)

Implementation and evaluation of an IEC-based 3D modeling system

Nishino, H., Takagi, H. & Utsumiya, K., Jan 1 2001, In : Proceedings of the IEEE International Conference on Systems, Man and Cybernetics. 2, p. 1047-1052 6 p.

Research output: Contribution to journalArticle

Evolutionary algorithms
modeling
test
evaluation
method
958 Citations (Scopus)

Interactive evolutionary computation: fusion of the capabilities of EC optimization and human evaluation

Takagi, H., Dec 1 2001, In : Proceedings of the IEEE. 89, 9, p. 1275-1296 22 p.

Research output: Contribution to journalArticle

Evolutionary algorithms
Fusion reactions
Hearing aids
Speech processing
Geophysics
4 Citations (Scopus)

Inversion in geology by interactive evolutionary computation

Wijns, C., Moresi, L., Boschetti, F. & Takagi, H., Jan 1 2001, In : Proceedings of the IEEE International Conference on Systems, Man and Cybernetics. 2, p. 1053-1057 5 p.

Research output: Contribution to journalArticle

Geology
Evolutionary algorithms
Faulting
2000
4 Citations (Scopus)

Design aspects of discovery systems

Maruyama, O. & Miyanq, S., Jan 1 2000, In : IEICE Transactions on Information and Systems. E83-D, 1, p. 61-70 10 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Evolving color recipes

Mizutani, E., Takagi, H., Auslander, D. M. & Jang, J. S. R., Nov 2000, In : IEEE Transactions on Systems, Man and Cybernetics Part C: Applications and Reviews. 30, 4, p. 537-550 14 p.

Research output: Contribution to journalArticle

Color
Paint
Neural networks
Soft computing
Fuzzy systems
1999
22 Citations (Scopus)

IEC-based hearing aid fitting

Takagi, H. & Ohsaki, M., 1999, In : Unknown Journal. 3

Research output: Contribution to journalArticle

Hearing aids
hearing
Evolutionary algorithms
aid
Design of experiments
Computer graphics
Angular velocity
Trajectories
27 Citations (Scopus)

On-line knowledge embedding for an interactive EC-based montage system

Takagi, H. & Kishi, K., 1999, In : Unknown Journal. p. 280-283 4 p.

Research output: Contribution to journalArticle

Evolutionary algorithms
fatigue
Embedded systems
method
Fatigue of materials

Significant differences in the frequency of transcriptional units, types and numbers of repetitive elements, GC content, and the number of CpG islands between a 1010-kb G-band genomic segment on chromosome 9q31.3 and a 1200-kb R-band genomic segment on chromosome 3p21.3

Daigo, Y., Isomura, M., Nishiwaki, T., Suzuki, K., Maruyama, O., Takeuchi, K., Yamane, Y., Hayashi, R., Minami, M., Hojo, Y., Uchiyama, I., Takagi, T. & Nakamura, Y., Jan 1 1999, In : DNA Research. 6, 4, p. 227-233 7 p.

Research output: Contribution to journalArticle

CpG Islands
Base Composition
Chromosomes
Alu Elements
Genes