Research Output

2001
8 Citations (Scopus)

Intercellular action of nitric oxide increases cGMP in cerebellar Purkinje cells

Hartell, N. A., Furuya, S., Jacoby, S. & Okada, D., Jan 22 2001, In : NeuroReport. 12, 1, p. 25-28 4 p.

Research output: Contribution to journalArticle

36 Citations (Scopus)

Isolation and characterization of enterocin SE-K4 produced by thermophilic enterococci, Enterococcus faecalis K-4

Eguchi, T., Kaminaka, K., Shima, J., Kawamoto, S., Mori, K., Choi, S. H., Doi, K., Ohmomo, S. & Ogata, S., Feb 1 2001, In : Bioscience, Biotechnology and Biochemistry. 65, 2, p. 247-253 7 p.

Research output: Contribution to journalArticle

47 Citations (Scopus)

Lactic acid recovery from model solutions and fermentation broth by electrodialysis

Nolasco-Hipolito, C., Thang, V. H., Kobayashi, G., Sonomoto, K. & Ishizaki, A., Feb 1 2001, In : Journal of the Faculty of Agriculture, Kyushu University. 45, 2, p. 531-540 10 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Molecular analysis of cross-reactive human monoclonal antibody AE6F4 generated by in vitro immunization: Epitope mapping of AE6F4 antibody on 14-3-3 family proteins and cytokeratin 8

Ichikawa, A., Shim, S. Y., Katakura, Y., Teruya, K., Hashizume, S. & Shirahata, S., Dec 1 2001, In : Cytotechnology. 36, 1-3, p. 101-107 7 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Neural stem cells lose telomerase activity upon differentiating into astrocytes

Miura, T., Katakura, Y., Yamamoto, K., Uehara, N., Tsuchiya, T., Kim, E. H. & Shirahata, S., Dec 1 2001, In : Cytotechnology. 36, 1-3, p. 137-144 8 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

New rice mutants lacking glutelin α-1 subunit

Qu, L. Q., Wei, X. L., Satoh, H., Kumamaru, T., Ogawa, M. & Jia, X., Dec 1 2001, In : Acta Genetica Sinica. 28, 3, p. 229-235 7 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Silicified Microbial Community at Steep Cone Hot Spring, Yellowstone National Park

Inagaki, F., Motomura, Y., Doi, K., Taguchi, S., Izawa, E., Lowe, D. R. & Ogata, S., Jan 1 2001, In : Microbes and Environments. 16, 2, p. 125-130 6 p.

Research output: Contribution to journalArticle

24 Citations (Scopus)

Structure and mode of action of bacteriocins produced by lactic acid bacteria

Sonomoto, K. & Sashihara, T., Jan 1 2001, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 46, 4 Suppl, p. 323-332 10 p.

Research output: Contribution to journalReview article

1 Citation (Scopus)

Subtractive screening of genes involved in cellular senescence

Uehara, N., Katakura, Y., Miura, T. & Shirahata, S., Jan 1 2001, In : Cytotechnology. 35, 1, p. 35-42 8 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Taxonomic position of new bacteriocin (nukacin ISK-1) producer isolated from long-aged Nukadoko

Ishizaki, A., Takese, E., Ikai, T., Kumai, S., Nagano, R., Sonomoto, K., Doi, K., Ogata, S., Kawamura, Y. & Ezaki, T., Jan 1 2001, In : Journal of General and Applied Microbiology. 47, 3, p. 143-147 5 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)
2002

Analysis of expression profile using fuzzy adaptive resonance theory

Tomida, S., Hanai, T., Honda, H. & Kobayashi, T., Aug 2002, In : Bioinformatics. 18, 8, p. 1073-1083 11 p.

Research output: Contribution to journalArticle

53 Citations (Scopus)

A regulatable selective system facilitates isolation of heterologous protein hyper-producing mammalian cells without gene amplification

Teruya, K., Zhang, Y., Katakura, Y. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 13-22 10 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Bayesian network and nonparametric heteroscedastic regression for nonlinear modeling of genetic network

Imoto, S., Sunyong, K., Goto, T., Aburatani, S., Tashiro, K., Kuhara, S. & Miyano, S., Jan 1 2002, Proceedings - IEEE Computer Society Bioinformatics Conference, CSB 2002. Institute of Electrical and Electronics Engineers Inc., p. 219-227 9 p. 1039344

Research output: Chapter in Book/Report/Conference proceedingConference contribution

15 Citations (Scopus)

Biophysical recognition system of time-series analog signals by a hebbian learning network

Tanaka, K. & Okamoto, M., Jan 1 2002, In : Chem-Bio Informatics Journal. 2, 2, p. 38-57 20 p.

Research output: Contribution to journalArticle

Cell to cell communication by autoinducing peptides in gram-positive bacteria

Sturme, M. H. J., Kleerebezem, M., Nakayama, J., Akkermans, A. D. L., Vaughan, E. E. & De Vos, W. M., Nov 23 2002, In : Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology. 81, 1-4, p. 233-243 11 p.

Research output: Contribution to journalArticle

161 Citations (Scopus)

Cell-to-cell communication in lactic acid bacteria

Nakayama, J. & Sonomoto, K., Jan 1 2002, In : Nippon Nogeikagaku Kaishi. 76, 9, p. 837-839 3 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Cloning and regulatory analysis of groESL operon from halophilic lactic acid bacterium Tetragenococcus halophila

Fukuda, D., Watanabe, M., Aso, Y., Sonomoto, K. & Ishizaki, A., Oct 1 2002, In : Journal of the Faculty of Agriculture, Kyushu University. 46, 2, p. 353-365 13 p.

Research output: Contribution to journalArticle

Construction of an in vitro allergy reaction evaluation system using human leukemia cell lines

Shim, S. Y., Ichikawa, A., Yamashita, M., Katakura, Y., Teruya, K., Mochizuki, Y., Tobinaga, E. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 75-83 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
86 Citations (Scopus)

Different individual immune responses elicited by in vitro immunization

Yamashita, M., Katakura, Y., Shim, S. Y., Matsumoto, S. E., Tamura, T., Morihara, K., Aiba, Y., Teruya, K., Tsuchiya, T. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 161-165 5 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Drug discovery based on microarray

Kuhara, S., Tashiro, K. & Muta, S., Dec 17 2002, In : Folia Pharmacologica Japonica. 120, SUPPL. 1, p. 47P-50P

Research output: Contribution to journalArticle

1 Citation (Scopus)

Erratum: Modulation of Mycobacterium tuberculosis DnaA protein-adenine nucleotide interactions by acidic phospholipids (Biochemical Journal (2002) 363 (305-311))

Yamamoto, K., Muniruzzaman, S., Rajagopalan, M. & Madiraju, M. V. V. S., Jun 15 2002, In : Biochemical Journal. 364, 3, p. 887-888 2 p.

Research output: Contribution to journalComment/debate

Fermented milk, Kefram-Kefir enhances glucose uptake into insulin-responsive muscle cells

Teruya, K., Yamashita, M., Tominaga, R., Nagira, T., Shim, S. Y., Katakura, Y., Tokumaru, S., Tokumaru, K., Barnes, D. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 107-116 10 p.

Research output: Contribution to journalArticle

25 Citations (Scopus)

Fuzzy neural network applied to gene expression profiling for predicting the prognosis of diffuse large B-cell Lymphoma

Ando, T., Suguro, M., Hanai, T., Kobayashi, T., Honda, H. & Seto, M., Nov 1 2002, In : Japanese Journal of Cancer Research. 93, 11, p. 1207-1212 6 p.

Research output: Contribution to journalArticle

43 Citations (Scopus)

Genetic basis of hybrid breakdown in a Japonica/Indica cross of rice, Oryza sativa L.

Kubo, T. & Yoshimura, A., Dec 1 2002, In : Theoretical and Applied Genetics. 105, 6-7, p. 906-911 6 p.

Research output: Contribution to journalArticle

27 Citations (Scopus)

High performance liquid chromatography and photodiode array detection of ferulic acid in Rubus protoplasts elicited by O-glycans from Fusarium sp. M7-1

Nita-Lazar, M., Chevolot, L., Iwahara, S., Takegawa, K., Furmanek, A. & Lienart, Y., Dec 1 2002, In : Acta Biochimica Polonica. 49, 4, p. 1019-1027 9 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Inheritance of alleles for glutelin α-2 subunit genes in rice and identification of their corresponding cDNA clone

Qu, L. Q., Wei, X. L., Satoh, H., Kumamaru, T., Ogawa, M. & Takaiwa, F., Dec 1 2002, In : Theoretical and Applied Genetics. 105, 8, p. 1099-1108 10 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Isolation, characterization, and cDNA sequence of a carotenoid binding protein from the silk gland of Bombyx mori larvae

Tabunoki, H., Sugiyama, H., Tanaka, Y., Fujii, H., Banno, Y., Jouni, Z. E., Kobayashi, M., Sato, R., Maekawa, H. & Tsuchida, K., Aug 30 2002, In : Journal of Biological Chemistry. 277, 35, p. 32133-32140 8 p.

Research output: Contribution to journalArticle

68 Citations (Scopus)

Isolation of enterocin SE-K4-encoding plasmid and a high enterocin SE-K4 producing strain of enterococcus faecalis K-4

Doi, K., Eguchi, T., Choi, S. H., Iwatake, A., Ohmomo, S. & Ogata, S., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 4, p. 434-436 3 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Isolation of nisin-producing Lactococcus lactis WNC 20 strain from nham, a traditional Thai fermented sausage

Noonpakdee, W., Santivarangkna, C., Jumriangrit, P., Sonomoto, K. & Panyim, S., Mar 15 2002, In : International Journal of Food Microbiology. 81, 2, p. 137-145 9 p.

Research output: Contribution to journalArticle

121 Citations (Scopus)

Modeling of Consumers' Preferences for Regular Coffee Samples and Its Application to Product Design

Tominaga, O., Ito, F., Hanai, T., Honda, H. & Kobayashi, T., Aug 2002, In : Food Science and Technology Research. 8, 3, p. 281-285 5 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Molecular characterization and regulatory analysis of dnaK operon of halophilic lactic acid bacterium Tetragenococcus halophila

Fukuda, D., Watanabe, M., Sonezaki, S., Sugimoto, S., Sonomoto, K. & Ishizaki, A., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 4, p. 388-394 7 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Reciprocal chromosome segment substitution series derived from japonica and indica cross of rice (Oryza sativa L.)

Kubo, T., Aida, Y., Nakamura, K., Tsunematsu, H., Doi, K. & Yoshimura, A., Dec 1 2002, In : Breeding Science. 52, 4, p. 319-325 7 p.

Research output: Contribution to journalArticle

116 Citations (Scopus)

Role of the Rab GTP-binding protein Ypt3 in the fission yeast exocytic pathway and its connection to calcineurin function

Cheng, H., Sugiura, R., Wu, W., Fujita, M., Lu, Y., Sio, S. O., Kawai, R., Takegawa, K., Shuntoh, H. & Kuno, T., Aug 1 2002, In : Molecular biology of the cell. 13, 8, p. 2963-2976 14 p.

Research output: Contribution to journalArticle

75 Citations (Scopus)
172 Citations (Scopus)

Specific binding of silkworm bombyx mori 30-kDa lipoproteins to carbohydrates containing glucose

Ujita, M., Kimura, A., Nishino, D., Yokoyama, E., Banno, Y., Fujii, H. & Hara, A., Jan 1 2002, In : Bioscience, Biotechnology and Biochemistry. 66, 10, p. 2264-2266 3 p.

Research output: Contribution to journalArticle

25 Citations (Scopus)

Study on fibroin heavy chain of the silkworm Bombyx mori by fluorescence in situ hybridization (FISH)

Song, F., Zhang, P., Yi, F., Hong, X., Lu, C., Banno, Y., Fujii, H. & Koga, K., Dec 1 2002, In : Science in China, Series C: Life Sciences. 45, 6, p. 663-668 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Suppression of thymidine phosphorylase-mediated angiogenesis and tumor growth by 2-deoxy-L-ribose

Uchimiya, H., Furukawa, T., Okamoto, M., Nakajima, Y., Matsushita, S., Ikeda, R., Gotanda, T., Haraguchi, M., Sumizawa, T., Ono, M., Kuwano, M., Kanzaki, T. & Akiyama, S. I., May 15 2002, In : Cancer Research. 62, 10, p. 2834-2839 6 p.

Research output: Contribution to journalArticle

48 Citations (Scopus)

Suppression of UVC-induced cell damage and enhancement of DNA repair by the fermented milk, Kefir

Nagira, T., Narisawa, J., Teruya, K., Katakura, Y., Shim, S. Y., Kusumoto, K. I., Tokumaru, S., Tokumaru, K., Barnes, D. W. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 125-137 13 p.

Research output: Contribution to journalArticle

18 Citations (Scopus)

Synchronized fresh cell bioreactor system for continuous L-(+)-lactic acid production using Lactococcus lactis IO-1 in hydrolysed sago starch

Nolasco-Hipolito, C., Matsunaka, T., Kobayashi, G., Sonomoto, K. & Ishizaki, A., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 3, p. 281-287 7 p.

Research output: Contribution to journalArticle

39 Citations (Scopus)

The groESL operon of the halophilic lactic acid bacterium tetragenococcus halophila

Fukuda, D., Watanabe, M., Aso, Y., Sonomoto, K. & Ishizaki, A., Jan 1 2002, In : Bioscience, Biotechnology and Biochemistry. 66, 5, p. 1176-1180 5 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

The rice mutant esp2 greatly accumulates the glutelin precursor and deletes the protein disulfide isomerase

Takemoto, Y., Coughlan, S. J., Okita, T. W., Satoh, H., Ogawa, M. & Kumamaru, T., Jan 1 2002, In : Plant physiology. 128, 4, p. 1212-1222 11 p.

Research output: Contribution to journalArticle

144 Citations (Scopus)

Transfer of high-mannose-type oligosaccharides to disaccharides by Endo-β-N-acetylglucosaminidase from Arthrobacter protophormiae

Fujita, K., Miyamura, T., Sano, M., Kato, I. & Takegawa, K., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 6, p. 614-617 4 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Two different pathways for D-xylose metabolism and the effect of xylose concentration on the yield coefficient of L-lactate in mixed-acid fermentation by the lactic acid bacterium Lactococcus lactis IO-1

Tanaka, K., Komiyama, A., Sonomoto, K., Ishizaki, A., Hall, S. & Stanbury, P., Oct 2002, In : Applied Microbiology and Biotechnology. 60, 1-2, p. 160-167 8 p.

Research output: Contribution to journalArticle

110 Citations (Scopus)
50 Citations (Scopus)

Web-based BEST-KIT• development of web-based Biochemical Engineering System analyzing Tool-KIT

Okamoto, M., Sakuraba, K., Yoshimura, J., Tanaka, K., Ueno, J. I., Mori, M., Shimonobou, T. & Sekiguchi, T., Jan 1 2002, In : Chem-Bio Informatics Journal. 2, 1, p. 1-17 17 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)
2003

A comparative study and phage typing of silage-making Lactobacillus bacteriophages

Doi, K., Zhang, Y., Nishizaki, Y., Umeda, A., Ohmomo, S. & Ogata, S., Jan 1 2003, In : Journal of Bioscience and Bioengineering. 95, 5, p. 518-525 8 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

A framework of grid-oriented genetic algorithms for large-scale optimization in bioinformatics

Imade, H., Morishita, R., Ono, I., Ono, N. & Okamoto, M., Jan 1 2003, p. 623-630. 8 p.

Research output: Contribution to conferencePaper

8 Citations (Scopus)

A hybrid system using both promoter activation and gene amplification for establishing exogenous protein hyper-producing cell lines

Dong, X. Y., Teruya, K., Katakura, Y., Zhang, Y., Miura, T., Daimon, Y., Mori, T., Ohashi, H. & Shirahata, S., Dec 1 2003, In : Cytotechnology. 43, 1-3, p. 11-17 7 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)