Research Output

2003

Response of Genes Associated with Mitochondrial Function to Mild Heat Stress in Yeast Saccharomyces cerevisiae

Sakaki, K., Tashiro, K., Kuhara, S. & Mihara, K., Sep 2003, In : Journal of biochemistry. 134, 3, p. 373-384 12 p.

Research output: Contribution to journalArticle

45 Citations (Scopus)

Role of phosphatidylinositol 3-phosphate in formation of forespore membrane in Schizosaccharomyces pombe

Onishi, M., Koga, T., Morita, R., Nakamura, Y., Nakamura, T., Shimoda, C., Takegawa, K., Hirata, A. & Fukui, Y., Feb 1 2003, In : Yeast. 20, 3, p. 193-206 14 p.

Research output: Contribution to journalReview article

20 Citations (Scopus)

The modeling of gene regulatory networks

Tashiro, K. & Kuhara, S., Jan 1 2003, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 48, 11 Suppl, p. 1450-1456 7 p.

Research output: Contribution to journalReview article

Use of gene networks from full genome microarray libraries to identify functionally relevant drug-affected genes and gene regulation cascades

Savoie, C. J., Aburatani, S., Watanabe, S., Eguchi, Y., Muta, S., Imoto, S., Miyano, S., Kuhara, S. & Tashiro, K., Apr 21 2003, In : DNA Research. 10, 1, p. 19-25 7 p.

Research output: Contribution to journalArticle

47 Citations (Scopus)

Vesicle-mediated protein transport pathways to the vacuole in Schizosaccharomyces pombe

Takegawa, K., Iwaki, T., Fujita, Y., Morita, T., Hosomi, A. & Tanaka, N., Oct 1 2003, In : Cell structure and function. 28, 5, p. 399-417 19 p.

Research output: Contribution to journalReview article

38 Citations (Scopus)
2002

Analysis of expression profile using fuzzy adaptive resonance theory

Tomida, S., Hanai, T., Honda, H. & Kobayashi, T., Aug 2002, In : Bioinformatics. 18, 8, p. 1073-1083 11 p.

Research output: Contribution to journalArticle

53 Citations (Scopus)

A regulatable selective system facilitates isolation of heterologous protein hyper-producing mammalian cells without gene amplification

Teruya, K., Zhang, Y., Katakura, Y. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 13-22 10 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Bayesian network and nonparametric heteroscedastic regression for nonlinear modeling of genetic network

Imoto, S., Sunyong, K., Goto, T., Aburatani, S., Tashiro, K., Kuhara, S. & Miyano, S., Jan 1 2002, Proceedings - IEEE Computer Society Bioinformatics Conference, CSB 2002. Institute of Electrical and Electronics Engineers Inc., p. 219-227 9 p. 1039344

Research output: Chapter in Book/Report/Conference proceedingConference contribution

15 Citations (Scopus)

Biophysical recognition system of time-series analog signals by a hebbian learning network

Tanaka, K. & Okamoto, M., Jan 1 2002, In : Chem-Bio Informatics Journal. 2, 2, p. 38-57 20 p.

Research output: Contribution to journalArticle

Cell to cell communication by autoinducing peptides in gram-positive bacteria

Sturme, M. H. J., Kleerebezem, M., Nakayama, J., Akkermans, A. D. L., Vaughan, E. E. & De Vos, W. M., Nov 23 2002, In : Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology. 81, 1-4, p. 233-243 11 p.

Research output: Contribution to journalArticle

161 Citations (Scopus)

Cell-to-cell communication in lactic acid bacteria

Nakayama, J. & Sonomoto, K., Jan 1 2002, In : Nippon Nogeikagaku Kaishi. 76, 9, p. 837-839 3 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Cloning and regulatory analysis of groESL operon from halophilic lactic acid bacterium Tetragenococcus halophila

Fukuda, D., Watanabe, M., Aso, Y., Sonomoto, K. & Ishizaki, A., Oct 1 2002, In : Journal of the Faculty of Agriculture, Kyushu University. 46, 2, p. 353-365 13 p.

Research output: Contribution to journalArticle

Construction of an in vitro allergy reaction evaluation system using human leukemia cell lines

Shim, S. Y., Ichikawa, A., Yamashita, M., Katakura, Y., Teruya, K., Mochizuki, Y., Tobinaga, E. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 75-83 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
86 Citations (Scopus)

Different individual immune responses elicited by in vitro immunization

Yamashita, M., Katakura, Y., Shim, S. Y., Matsumoto, S. E., Tamura, T., Morihara, K., Aiba, Y., Teruya, K., Tsuchiya, T. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 161-165 5 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Drug discovery based on microarray

Kuhara, S., Tashiro, K. & Muta, S., Dec 17 2002, In : Folia Pharmacologica Japonica. 120, SUPPL. 1, p. 47P-50P

Research output: Contribution to journalArticle

1 Citation (Scopus)

Erratum: Modulation of Mycobacterium tuberculosis DnaA protein-adenine nucleotide interactions by acidic phospholipids (Biochemical Journal (2002) 363 (305-311))

Yamamoto, K., Muniruzzaman, S., Rajagopalan, M. & Madiraju, M. V. V. S., Jun 15 2002, In : Biochemical Journal. 364, 3, p. 887-888 2 p.

Research output: Contribution to journalComment/debate

Fermented milk, Kefram-Kefir enhances glucose uptake into insulin-responsive muscle cells

Teruya, K., Yamashita, M., Tominaga, R., Nagira, T., Shim, S. Y., Katakura, Y., Tokumaru, S., Tokumaru, K., Barnes, D. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 107-116 10 p.

Research output: Contribution to journalArticle

25 Citations (Scopus)

Fuzzy neural network applied to gene expression profiling for predicting the prognosis of diffuse large B-cell Lymphoma

Ando, T., Suguro, M., Hanai, T., Kobayashi, T., Honda, H. & Seto, M., Nov 1 2002, In : Japanese Journal of Cancer Research. 93, 11, p. 1207-1212 6 p.

Research output: Contribution to journalArticle

43 Citations (Scopus)

Genetic basis of hybrid breakdown in a Japonica/Indica cross of rice, Oryza sativa L.

Kubo, T. & Yoshimura, A., Dec 1 2002, In : Theoretical and Applied Genetics. 105, 6-7, p. 906-911 6 p.

Research output: Contribution to journalArticle

27 Citations (Scopus)

High performance liquid chromatography and photodiode array detection of ferulic acid in Rubus protoplasts elicited by O-glycans from Fusarium sp. M7-1

Nita-Lazar, M., Chevolot, L., Iwahara, S., Takegawa, K., Furmanek, A. & Lienart, Y., Dec 1 2002, In : Acta Biochimica Polonica. 49, 4, p. 1019-1027 9 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Inheritance of alleles for glutelin α-2 subunit genes in rice and identification of their corresponding cDNA clone

Qu, L. Q., Wei, X. L., Satoh, H., Kumamaru, T., Ogawa, M. & Takaiwa, F., Dec 1 2002, In : Theoretical and Applied Genetics. 105, 8, p. 1099-1108 10 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Isolation, characterization, and cDNA sequence of a carotenoid binding protein from the silk gland of Bombyx mori larvae

Tabunoki, H., Sugiyama, H., Tanaka, Y., Fujii, H., Banno, Y., Jouni, Z. E., Kobayashi, M., Sato, R., Maekawa, H. & Tsuchida, K., Aug 30 2002, In : Journal of Biological Chemistry. 277, 35, p. 32133-32140 8 p.

Research output: Contribution to journalArticle

68 Citations (Scopus)

Isolation of enterocin SE-K4-encoding plasmid and a high enterocin SE-K4 producing strain of enterococcus faecalis K-4

Doi, K., Eguchi, T., Choi, S. H., Iwatake, A., Ohmomo, S. & Ogata, S., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 4, p. 434-436 3 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Isolation of nisin-producing Lactococcus lactis WNC 20 strain from nham, a traditional Thai fermented sausage

Noonpakdee, W., Santivarangkna, C., Jumriangrit, P., Sonomoto, K. & Panyim, S., Mar 15 2002, In : International Journal of Food Microbiology. 81, 2, p. 137-145 9 p.

Research output: Contribution to journalArticle

121 Citations (Scopus)

Modeling of Consumers' Preferences for Regular Coffee Samples and Its Application to Product Design

Tominaga, O., Ito, F., Hanai, T., Honda, H. & Kobayashi, T., Aug 2002, In : Food Science and Technology Research. 8, 3, p. 281-285 5 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Molecular characterization and regulatory analysis of dnaK operon of halophilic lactic acid bacterium Tetragenococcus halophila

Fukuda, D., Watanabe, M., Sonezaki, S., Sugimoto, S., Sonomoto, K. & Ishizaki, A., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 4, p. 388-394 7 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Reciprocal chromosome segment substitution series derived from japonica and indica cross of rice (Oryza sativa L.)

Kubo, T., Aida, Y., Nakamura, K., Tsunematsu, H., Doi, K. & Yoshimura, A., Dec 1 2002, In : Breeding Science. 52, 4, p. 319-325 7 p.

Research output: Contribution to journalArticle

116 Citations (Scopus)

Role of the Rab GTP-binding protein Ypt3 in the fission yeast exocytic pathway and its connection to calcineurin function

Cheng, H., Sugiura, R., Wu, W., Fujita, M., Lu, Y., Sio, S. O., Kawai, R., Takegawa, K., Shuntoh, H. & Kuno, T., Aug 1 2002, In : Molecular biology of the cell. 13, 8, p. 2963-2976 14 p.

Research output: Contribution to journalArticle

75 Citations (Scopus)
172 Citations (Scopus)

Specific binding of silkworm bombyx mori 30-kDa lipoproteins to carbohydrates containing glucose

Ujita, M., Kimura, A., Nishino, D., Yokoyama, E., Banno, Y., Fujii, H. & Hara, A., Jan 1 2002, In : Bioscience, Biotechnology and Biochemistry. 66, 10, p. 2264-2266 3 p.

Research output: Contribution to journalArticle

25 Citations (Scopus)

Study on fibroin heavy chain of the silkworm Bombyx mori by fluorescence in situ hybridization (FISH)

Song, F., Zhang, P., Yi, F., Hong, X., Lu, C., Banno, Y., Fujii, H. & Koga, K., Dec 1 2002, In : Science in China, Series C: Life Sciences. 45, 6, p. 663-668 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Suppression of thymidine phosphorylase-mediated angiogenesis and tumor growth by 2-deoxy-L-ribose

Uchimiya, H., Furukawa, T., Okamoto, M., Nakajima, Y., Matsushita, S., Ikeda, R., Gotanda, T., Haraguchi, M., Sumizawa, T., Ono, M., Kuwano, M., Kanzaki, T. & Akiyama, S. I., May 15 2002, In : Cancer Research. 62, 10, p. 2834-2839 6 p.

Research output: Contribution to journalArticle

48 Citations (Scopus)

Suppression of UVC-induced cell damage and enhancement of DNA repair by the fermented milk, Kefir

Nagira, T., Narisawa, J., Teruya, K., Katakura, Y., Shim, S. Y., Kusumoto, K. I., Tokumaru, S., Tokumaru, K., Barnes, D. W. & Shirahata, S., Nov 2002, In : Cytotechnology. 40, 1-3, p. 125-137 13 p.

Research output: Contribution to journalArticle

18 Citations (Scopus)

Synchronized fresh cell bioreactor system for continuous L-(+)-lactic acid production using Lactococcus lactis IO-1 in hydrolysed sago starch

Nolasco-Hipolito, C., Matsunaka, T., Kobayashi, G., Sonomoto, K. & Ishizaki, A., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 3, p. 281-287 7 p.

Research output: Contribution to journalArticle

39 Citations (Scopus)

The groESL operon of the halophilic lactic acid bacterium tetragenococcus halophila

Fukuda, D., Watanabe, M., Aso, Y., Sonomoto, K. & Ishizaki, A., Jan 1 2002, In : Bioscience, Biotechnology and Biochemistry. 66, 5, p. 1176-1180 5 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

The rice mutant esp2 greatly accumulates the glutelin precursor and deletes the protein disulfide isomerase

Takemoto, Y., Coughlan, S. J., Okita, T. W., Satoh, H., Ogawa, M. & Kumamaru, T., Jan 1 2002, In : Plant physiology. 128, 4, p. 1212-1222 11 p.

Research output: Contribution to journalArticle

144 Citations (Scopus)

Two different pathways for D-xylose metabolism and the effect of xylose concentration on the yield coefficient of L-lactate in mixed-acid fermentation by the lactic acid bacterium Lactococcus lactis IO-1

Tanaka, K., Komiyama, A., Sonomoto, K., Ishizaki, A., Hall, S. & Stanbury, P., Oct 2002, In : Applied Microbiology and Biotechnology. 60, 1-2, p. 160-167 8 p.

Research output: Contribution to journalArticle

110 Citations (Scopus)
50 Citations (Scopus)

Web-based BEST-KIT• development of web-based Biochemical Engineering System analyzing Tool-KIT

Okamoto, M., Sakuraba, K., Yoshimura, J., Tanaka, K., Ueno, J. I., Mori, M., Shimonobou, T. & Sekiguchi, T., Jan 1 2002, In : Chem-Bio Informatics Journal. 2, 1, p. 1-17 17 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)
2001

Angiogenesis factors

Kuwano, M., Fukushi, J. I., Okamoto, M., Nishie, A., Goto, H., Ishibashi, T. & Ono, M., Jul 2001, In : Internal Medicine. 40, 7, p. 565-572 8 p.

Research output: Contribution to journalReview article

72 Citations (Scopus)

Availability of oncogene activated production system for mass production of light chain of human antibody in CHO cells

Miura, T., Katakura, Y., Seto, P., Zhang, Y., Teruya, K., Nishimura, E., Kato, M., Hashizume, S. & Shirahata, S., Apr 28 2001, In : Cytotechnology. 35, 1, p. 9-16 8 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Biochemical and genetic evidence for production of enterocins A and B by Enterococcus faecium WHE 81

Ennahar, S., Asou, Y., Zendo, T., Sonomoto, K. & Ishizaki, A., Nov 8 2001, In : International Journal of Food Microbiology. 70, 3, p. 291-301 11 p.

Research output: Contribution to journalArticle

94 Citations (Scopus)

Biodiesel production from crude palm oil and evaluation of butanol extraction and fuel properties

Crabbe, E., Nolasco-Hipolito, C., Kobayashi, G., Sonomoto, K. & Ishizaki, A., Sep 26 2001, In : Process Biochemistry. 37, 1, p. 65-71 7 p.

Research output: Contribution to journalArticle

298 Citations (Scopus)

Change in phenoloxidase and its precursor during silkworm (a80 strain) development

Yamamoto, K., Fujii, H., Kusakabe, T., Koga, K., Aso, Y. & Ishiguro, M., Feb 1 2001, In : Journal of the Faculty of Agriculture, Kyushu University. 45, 2, p. 487-493 7 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Chemical synthesis and biological activity of the gelatinase biosynthesis-activating pheromone of enterococcus faecalis and its analogs

Nakayama, J., Cao, Y., Horii, T., Sakuda, S. & Nagasawa, H., Oct 1 2001, In : Bioscience, Biotechnology and Biochemistry. 65, 10, p. 2322-2325 4 p.

Research output: Contribution to journalArticle

43 Citations (Scopus)

Cloning and characterization of dnaK operon of Tetragenococcus halophila

Fukuda, D., Watanabe, M., Sonezaki, S., Sonomoto, K. & Ishizaki, A., Jan 1 2001, In : Journal of the Faculty of Agriculture, Kyushu University. 46, 1, p. 229-241 13 p.

Research output: Contribution to journalArticle

Development of a system for the inference of large scale genetic networks.

Maki, Y., Tominaga, D., Okamoto, M., Watanabe, S. & Eguchi, Y., Jan 1 2001, In : Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 446-458 13 p.

Research output: Contribution to journalArticle

113 Citations (Scopus)

Disruption of the hup gene encoding a histone-like protein HSl and detection of HSl2 of Streptomyces lividans

Yokoyama, E., Doi, K., Kimura, M. & Ogata, S., Jan 1 2001, In : Research in Microbiology. 152, 8, p. 717-723 7 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Epitope analysis of human monoclonal antibody specific for rice allergenic protein generated by in vitro immunization

Shim, S. Y., Katakura, Y., Ichikawa, A., Teruya, K., Matsuda, T. & Shirahata, S., Dec 1 2001, In : Cytotechnology. 36, 1-3, p. 109-115 7 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)