Research Output 1979 2020

2017
2 Citations (Scopus)

Corrigendum: Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.) (Scientific Reports, (2017), 7, 1, (41124), 10.1038/srep41124)

Mori, K., Shirasawa, K., Nogata, H., Hirata, C., Tashiro, K., Habu, T., Kim, S., Himeno, S., Kuhara, S. & Ikegami, H., Sep 25 2017, In : Scientific reports. 7, 1, 46784.

Research output: Contribution to journalComment/debate

Open Access
Sex Determination Processes
Carica
Ficus
Genome
Alleles
3 Citations (Scopus)

Development of a systematic feedback isolation approach for targeted strains from mixed culture systems

Poudel, P., Tashiro, Y., Miyamoto, H., Miyamoto, H., Okugawa, Y. & Sakai, K., Jan 1 2017, In : Journal of Bioscience and Bioengineering. 123, 1, p. 63-70 8 p.

Research output: Contribution to journalArticle

Bacillus
Bacilli
Feedback
Denaturing Gradient Gel Electrophoresis
Bacteria
60 Citations (Scopus)

Development of the gut microbiota in infancy and its impact on health in later life

Tanaka, M. & Nakayama, J., Oct 2017, In : Allergology International. 66, 4, p. 515-522 8 p.

Research output: Contribution to journalReview article

Immune System
Health
Immune System Diseases
Ecology
Gastrointestinal Tract

Draft genome sequence of Streptomyces sp. JHA26, a strain that harbors a PA14 domain containing β-D-galactofuranosidase

Matsunaga, E., Higuchi, Y., Mori, K., Tashiro, K. & Takegawa, K., Apr 1 2017, In : Genome Announcements. 5, 15, e0019017.

Research output: Contribution to journalArticle

Streptomyces
Genome
Firearms
Genes
11 Citations (Scopus)

Duplication and loss of function of genes encoding RNA polymerase III subunit C4 causes hybrid incompatibility in rice

Nguyen, G. N., Yamagata, Y., Shigematsu, Y., Watanabe, M., Miyazaki, Y., Doi, K., Tashiro, K., Kuhara, S., Kanamori, H., Wu, J., Matsumoto, T., Yasui, H. & Yoshimura, A., Jan 1 2017, In : G3: Genes, Genomes, Genetics. 7, 8, p. 2565-2575 11 p.

Research output: Contribution to journalArticle

RNA Polymerase III
Infertility
Alleles
Genes
Germ Cells
1 Citation (Scopus)
endosomes
Aspergillus oryzae
amylases
cell differentiation
organelles

Ecological distribution of extremely thermophilic bacteria belonging to the genus Calditerricola using the novel enrichment MPN-PCR method

Bienes, K. M., Ito, M., Shiotsuka, K., Yamaguchi, S., Fujioka, T., Tashiro, Y. & Sakai, K., Nov 2017, In : Journal of Bioscience and Bioengineering. 124, 5, p. 559-563 5 p.

Research output: Contribution to journalArticle

Composting
Sewage
Bacteria
Soil
Ashes
8 Citations (Scopus)

Electrochemically reduced water exerts superior reactive oxygen species scavenging activity in HT1080 cells than the equivalent level of hydrogen-dissolved water

Hamasaki, T., Harada, G., Nakamichi, N., Kabayama, S., Teruya, K., Fugetsu, B., Gong, W., Sakata, I. & Shirahata, S., Feb 2017, In : PloS one. 12, 2, e0171192.

Research output: Contribution to journalArticle

Open Access
Scavenging
hydrogen
Hydrogen
reactive oxygen species
Reactive Oxygen Species
3 Citations (Scopus)

Enhanced production of raw starch degrading enzyme using agro-industrial waste mixtures by thermotolerant Rhizopus microsporus for raw cassava chip saccharification in ethanol production

Trakarnpaiboon, S., Srisuk, N., Piyachomkwan, K., Sakai, K. & Kitpreechavanich, V., Sep 14 2017, In : Preparative Biochemistry and Biotechnology. 47, 8, p. 813-823 11 p.

Research output: Contribution to journalArticle

Industrial Waste
Rhizopus
Saccharification
Manihot
Starch
6 Citations (Scopus)

Enhancement of acetone-butanol-ethanol fermentation from eucalyptus hydrolysate with optimized nutrient supplementation through statistical experimental designs

Zheng, J., Tashiro, Y., Zhao, T., Wang, Q., Sakai, K. & Sonomoto, K., Jan 1 2017, In : Renewable Energy. 113, p. 580-586 7 p.

Research output: Contribution to journalArticle

Butenes
Acetone
Design of experiments
Fermentation
Nutrients
10 Citations (Scopus)

Enhancement of L-lactic acid production via synergism in open co-fermentation of Sophora flavescens residues and food waste

Zheng, J., Gao, M., Wang, Q., Wang, J., Sun, X., Chang, Q. & Tashiro, Y., Feb 1 2017, In : Bioresource Technology. 225, p. 159-164 6 p.

Research output: Contribution to journalArticle

synergism
Lactic acid
Fermentation
fermentation
Lactic Acid

Fed-batch fermentation for enhanced lactic acid production from glucose/xylose mixture without carbon catabolite repression

Abdel-Rahman, M. A., Xiao, Y. & Wang, Y., Jan 1 2017, In : Seibutsu-kogaku Kaishi. 95, 2, 1 p.

Research output: Contribution to journalComment/debate

Catabolite Repression
batch fermentation
xylose
lactic acid
Fermentation
5 Citations (Scopus)

Fermented papaya preparation restores age- related reductions in peripheral blood mononuclear cell cytolytic activity in tube- fed patients

Fujita, Y., Tsuno, H. & Nakayama, J., Jan 2017, In : PloS one. 12, 1, e0169240.

Research output: Contribution to journalArticle

Carica
tube feeding
papayas
Polyphenols
mononuclear leukocytes
5 Citations (Scopus)

Functional analysis of the biosynthetic gene cluster required for immunity and secretion of a novel Lactococcus-specific bacteriocin, lactococcin Z

Daba, G. M., Ishibashi, N., Zendo, T. & Sonomoto, K., Nov 2017, In : Journal of Applied Microbiology. 123, 5, p. 1124-1132 9 p.

Research output: Contribution to journalArticle

Lactococcus
Bacteriocins
Multigene Family
Immunity
lactococcin A
1 Citation (Scopus)

Genetic characterization and fine mapping of S25, a hybrid male sterility gene, on rice chromosome 12

Kubo, T., Yoshimura, A. & Kurata, N., Jan 1 2017, In : Genes and Genetic Systems. 92, 4, p. 205-212 8 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 12
Male Infertility
Genes
Genetic Epistasis
Reproductive Isolation

Genetic studies on two egg mutants, “small size egg” and “lethal non- diapausing egg” in the silkworm, Bombyx mori

Banno, Y., Fujii, T., Fukumori, H., Yamamoto, K. & Kobayashi, J., Jan 1 2017, In : Journal of Insect Biotechnology and Sericology. 86, 3, p. 123-126 4 p.

Research output: Contribution to journalArticle

Lethal Genes
Oogenesis
Bombyx
oogenesis
Bombyx mori
50 Citations (Scopus)

Genomic adaptation to polyphagy and insecticides in a major East Asian noctuid pest

Cheng, T., Wu, J., Wu, Y., Chilukuri, R. V., Huang, L., Yamamoto, K., Feng, L., Li, W., Chen, Z., Guo, H., Liu, J., Li, S., Wang, X., Peng, L., Liu, D., Guo, Y., Fu, B., Li, Z., Liu, C., Chen, Y. & 18 others, Tomar, A., Hilliou, F., Montagné, N., Jacquin-Joly, E., D'Alençon, E., Seth, R. K., Bhatnagar, R. K., Jouraku, A., Shiotsuki, T., Kadono-Okuda, K., Promboon, A., Smagghe, G., Arunkumar, K. P., Kishino, H., Goldsmith, M. R., Feng, Q., Xia, Q. & Mita, K., Nov 1 2017, In : Nature Ecology and Evolution. 1, 11, p. 1747-1756 10 p.

Research output: Contribution to journalArticle

Spodoptera litura
detoxification
insecticide
genomics
insecticides
6 Citations (Scopus)

Genotype by environment interactions (GEIs) for barley grain yield under salt stress condition

Elakhdar, A., Kumamaru, T., Smith, K. P., Brueggeman, R. S., Capo-chichi, L. J. A. & Solanki, S., Sep 1 2017, In : Journal of Crop Science and Biotechnology. 20, 3, p. 193-204 12 p.

Research output: Contribution to journalArticle

Hordeum
salt stress
Salts
grain yield
barley
11 Citations (Scopus)

GfsA is a β1,5-galactofuranosyltransferase involved in the biosynthesis of the galactofuran side chain of fungal-type galactomannan in Aspergillus fumigatus

Katafuchi, Y., Li, Q., Tanaka, Y., Shinozuka, S., Kawamitsu, Y., Izumi, M., Ekino, K., Mizuki, K., Takegawa, K., Shibata, N., Goto, M., Nomura, Y., Ohta, K. & Oka, T., Jun 1 2017, In : Glycobiology. 27, 6, p. 568-581 14 p.

Research output: Contribution to journalArticle

Aspergillus fumigatus
Uridine Diphosphate
Aspergillus
Biosynthesis
Aspergillus nidulans
8 Citations (Scopus)

Highly efficient transglycosylation of sialo-complex-type oligosaccharide using Coprinopsis cinerea endoglycosidase and sugar oxazoline

Higuchi, Y., Eshima, Y., Huang, Y., Kinoshita, T., Sumiyoshi, W., Nakakita, S. I. & Takegawa, K., Jan 1 2017, In : Biotechnology letters. 39, 1, p. 157-162 6 p.

Research output: Contribution to journalArticle

Oligosaccharides
Glycoside Hydrolases
Sugars
Glycoproteins
Acetylglucosaminidase

Identification and localization of a novel ecdysone oxidase in the silkworm, bombyx mori

Yamamoto, K. & Nagaoka, S., Jan 1 2017, In : Journal of Insect Biotechnology and Sericology. 86, 2, p. 49-53 5 p.

Research output: Contribution to journalArticle

Bombyx
ecdysone
ecdysteroids
Bombyx mori
silkworms
15 Citations (Scopus)

Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.)

Mori, K., Shirasawa, K., Nogata, H., Hirata, C., Tashiro, K., Habu, T., Kim, S., Himeno, S., Kuhara, S. & Ikegami, H., Jan 25 2017, In : Scientific reports. 7, 41124.

Research output: Contribution to journalArticle

Carica
Ficus
Genome
Genome-Wide Association Study
Missense Mutation

Identifying a sigma class glutathione S-transferase 2 from the silkworm Bombyx mori

Hirowatari, A., Nagaoka, S., Yamada, N. & Yamamoto, K., Jan 1 2017, In : Journal of Insect Biotechnology and Sericology. 86, 1, p. 1-7 7 p.

Research output: Contribution to journalArticle

Bombyx
Bombyx mori
silkworms
Glutathione Transferase
glutathione transferase
36 Citations (Scopus)

Impact of westernized diet on gut microbiota in children on Leyte island

Nakayama, J., Yamamoto, A., Palermo-Conde, L. A., Higashi, K., Sonomoto, K., Tan, J. & Lee, Y. K., Feb 14 2017, In : Frontiers in Microbiology. 8, FEB, 197.

Research output: Contribution to journalArticle

Islands
Microbiota
Diet
Succinic Acid
Prevotella
11 Citations (Scopus)
Synechococcus
Cyanobacteria
Metabolic Networks and Pathways
Glycerol
Gene expression

Investigation of kinetic-order sensitivities in metabolic reaction networks

Yamada, M., Iwanaga, M., Sriyudthsak, K., Hirai, M. Y. & Shiraishi, F., Feb 21 2017, In : Journal of Theoretical Biology. 415, p. 32-40 9 p.

Research output: Contribution to journalArticle

Reaction Network
Metabolic Network
Metabolic Networks and Pathways
Kinetics
kinetics
3 Citations (Scopus)

In vitro synergistic activities of cefazolin and nisin a against mastitis pathogens

Kitazaki, K., Koga, S., Nagatoshi, K., Kuwano, K., Zendo, T., Nakayama, J., Sonomoto, K., Ano, H. & Katamoto, H., Jan 1 2017, In : Journal of Veterinary Medical Science. 79, 9, p. 1472-1479 8 p.

Research output: Contribution to journalArticle

cefazolin
Nisin
Cefazolin
nisin
Mastitis
3 Citations (Scopus)

Isolation and characterization of Lactobacillus paracasei LPC and phage ΦT25 from fermented milk

Sunthornthummas, S., Doi, K., Rangsiruji, A., Sarawaneeyaruk, S. & Pringsulaka, O., Mar 1 2017, In : Food Control. 73, p. 1353-1361 9 p.

Research output: Contribution to journalArticle

Lactobacillus paracasei
fermented milk
bacteriophages
Bacteriophages
Milk
6 Citations (Scopus)

Isolation and selection of lactic acid bacteria from Thai indigenous fermented foods for use as probiotics in tilapia fish Oreochromis niloticus

Meidong, R., Doolgindachbaporn, S., Sakai, K. & Tongpim, S., Jan 1 2017, In : AACL Bioflux. 10, 2, p. 455-463 9 p.

Research output: Contribution to journalArticle

probiotics
fermented foods
tilapia (common name)
Lactobacillus plantarum
Oreochromis niloticus
3 Citations (Scopus)

LiaRS reporter assay: A simple tool to identify lipid II binding moieties in lantibiotic nukacin ISK-1

Elsayed, K. M., Islam, M. R., Abdullah-Al-Mahin, Nagao, J. I., Zendo, T. & Sonomoto, K., Mar 1 2017, In : Journal of Bioscience and Bioengineering. 123, 3, p. 398-401 4 p.

Research output: Contribution to journalArticle

Bacteriocins
Lipids
Assays
Antibiotics
Bacilli
1 Citation (Scopus)

Localization of an Aldo-Keto Reductase (AKR2E4) in the Silkworm Bombyx mori (Lepidoptera: Bombycidae)

Yamamoto, K., Ozakiya, Y. & Uno, T., Jan 1 2017, In : Journal of Insect Science. 17, 5, 94.

Research output: Contribution to journalArticle

Bombycidae
Bombyx mori
silkworms
testes
ecdysone
2 Citations (Scopus)

Long-term preservation of eri and ailanthus silkworms using frozen gonads

Fukumori, H., Lee, J., Fujii, T., Kajiura, Z. & Banno, Y., Aug 2017, In : Cryobiology. 77, p. 71-74 4 p.

Research output: Contribution to journalArticle

Ailanthus
Bombyx
Gonads
silkworms
gonads
14 Citations (Scopus)

Metabolic engineering for isopropanol production by an engineered cyanobacterium, Synechococcus elongatus PCC 7942, under photosynthetic conditions

Hirokawa, Y., Dempo, Y., Fukusaki, E. & Hanai, T., Jan 1 2017, In : Journal of Bioscience and Bioengineering. 123, 1, p. 39-45 7 p.

Research output: Contribution to journalArticle

Metabolic engineering
Synechococcus
Metabolic Engineering
2-Propanol
Cyanobacteria
9 Citations (Scopus)
Metabolic engineering
Synechococcus
Metabolic Engineering
Glycerol
Computer Simulation
5 Citations (Scopus)

Molecular structure of a prostaglandin D synthase requiring glutathione from the brown planthopper, Nilaparvata lugens

Yamamoto, K., Higashiura, A., Suzuki, M., Aritake, K., Urade, Y. & Nakagawa, A., Oct 14 2017, In : Biochemical and Biophysical Research Communications. 492, 2, p. 166-171 6 p.

Research output: Contribution to journalArticle

prostaglandin R2 D-isomerase
Molecular Structure
Molecular structure
Glutathione
Insects
8 Citations (Scopus)

Multifunctional rna binding protein ostudor-sn in storage protein mrna transport and localization

Chou, H. L., Tian, L., Kumamaru, T., Hamada, S. & Okita, T. W., Dec 2017, In : Plant physiology. 175, 4, p. 1608-1623 16 p.

Research output: Contribution to journalArticle

RNA-Binding Proteins
protein transport
nucleases
Protein Transport
storage proteins
3 Citations (Scopus)

Mutations near the cleavage site of enterocin NKR-5-3B prepeptide reveal new insights into its biosynthesis

Perez, R. H., Sugino, H., Ishibashi, N., Zendo, T., Wilaipun, P., Leelawatcharamas, V., Nakayama, J. & Sonomoto, K., Apr 2017, In : Microbiology (United Kingdom). 163, 4, p. 431-441 11 p., 000435.

Research output: Contribution to journalArticle

Bacteriocins
Mutation
Protein Sorting Signals
Peptides
Enzymes
7 Citations (Scopus)

Novel multifunctional plant growth–promoting bacteria in co-compost of palm oil industry waste

Chin, C. F. S., Furuya, Y., Zainudin, M. H. M., Ramli, N., Hassan, M. A., Tashiro, Y. & Sakai, K., Nov 2017, In : Journal of Bioscience and Bioengineering. 124, 5, p. 506-513 8 p.

Research output: Contribution to journalArticle

Composting
Palm oil
Bacteria
Industry
Soil
4 Citations (Scopus)

Preparation and biological activities of anti-HER2 monoclonal antibodies with fully core-fucosylated homogeneous bi-antennary complex-type glycans

Tsukimura, W., Kurogochi, M., Mori, M., Osumi, K., Matsuda, A., Takegawa, K., Furukawa, K. & Shirai, T., Jan 1 2017, In : Bioscience, Biotechnology and Biochemistry. 81, 12, p. 2353-2359 7 p.

Research output: Contribution to journalArticle

Bioactivity
Polysaccharides
Monoclonal Antibodies
Cytotoxicity
Fucose
4 Citations (Scopus)

Production of 3-hydroxypropionic acid via the malonyl-CoA pathway using recombinant fission yeast strains

Suyama, A., Higuchi, Y., Urushihara, M., Maeda, Y. & Takegawa, K., Oct 2017, In : Journal of Bioscience and Bioengineering. 124, 4, p. 392-399 8 p.

Research output: Contribution to journalArticle

Malonyl Coenzyme A
Schizosaccharomyces
Yeast
Acids
Escherichia coli
10 Citations (Scopus)
Cell growth
Metabolic Networks and Pathways
Fermentation
gamma-Aminobutyric Acid
Escherichia coli
3 Citations (Scopus)

Regulation of mating type switching by the mating type genes and RME1 in Ogataea polymorpha

Yamamoto, K., Tran, T. N. M., Takegawa, K., Kaneko, Y. & Maekawa, H., Dec 1 2017, In : Scientific reports. 7, 1, 16284.

Research output: Contribution to journalArticle

genes
loci
starvation
yeasts
ploidy
8 Citations (Scopus)

Regulation of matrix metalloproteinase-1 and alpha-smooth muscle actin expression by interleukin-1 alpha and tumour necrosis factor alpha in hepatic stellate cells

Inoue, A., Obayashi, K., Sonoda, Y., Nakamura, A., Ueno, T., Kuhara, S. & Tashiro, K., Jun 1 2017, In : Cytotechnology. 69, 3, p. 461-468 8 p.

Research output: Contribution to journalArticle

Hepatic Stellate Cells
Matrix Metalloproteinase 1
Interleukin-1alpha
Smooth Muscle
Muscle
8 Citations (Scopus)

Signatures in the gut microbiota of Japanese infants who developed food allergies in early childhood

Tanaka, M., Korenori, Y., Washio, M., Kobayashi, T., Momoda, R., Kiyohara, C., Kuroda, A., Saito, Y., Sonomoto, K. & Nakayama, J., Aug 1 2017, In : FEMS microbiology ecology. 93, 8

Research output: Contribution to journalArticle

allergy
Food Hypersensitivity
Clostridium
food
weaning
4 Citations (Scopus)

SMARCD1 regulates senescence-associated lipid accumulation in hepatocytes

Inoue, C., Zhao, C., Tsuduki, Y., Udono, M., Wang, L., Nomura, M. & Katakura, Y., Dec 1 2017, In : npj Aging and Mechanisms of Disease. 3, 1, 11.

Research output: Contribution to journalArticle

Cell Aging
Hepatocytes
Lipids
Genes
Chromatin Assembly and Disassembly
5 Citations (Scopus)

Soy peptide ingestion augments the synthesis and metabolism of noradrenaline in the mouse brain

Imai, H., Moriyasu, K., Nakahata, A., Maebuchi, M., Ichinose, T. & Furuya, S., Jan 1 2017, In : Bioscience, Biotechnology and Biochemistry. 81, 5, p. 1007-1013 7 p.

Research output: Contribution to journalArticle

Metabolism
Brain
Norepinephrine
Eating
Peptides
2 Citations (Scopus)
Lactobacillus
Lactic acid
L-Lactate Dehydrogenase
Lactic Acid
Phosphates
9 Citations (Scopus)
Acetyl Coenzyme A
2-Propanol
Pyruvic Acid
Escherichia coli
Switches
3 Citations (Scopus)
Restriction Fragment Length Polymorphisms
Hair
Crime
Microsatellite Repeats
Volunteers
11 Citations (Scopus)

The effects of administration of the Lactobacillus gasseri strain CP2305 on quality of life, clinical symptoms and changes in gene expression in patients with irritable bowel syndrome

Nobutani, K., Sawada, D., Fujiwara, S., Kuwano, Y., Nishida, K., Nakayama, J., Kutsumi, H., Azuma, T. & Rokutan, K., Jan 1 2017, In : Journal of Applied Microbiology. 122, 1, p. 212-224 13 p.

Research output: Contribution to journalArticle

Irritable Bowel Syndrome
Quality of Life
Gene Expression
Eukaryotic Initiation Factor-2
Gene Expression Profiling