Research Output 1979 2019

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Review article
2019

The rice storage protein mRNAs as a model system for RNA localization in higher plants

Chou, H. L., Tian, L., Washida, H., Fukuda, M., Kumamaru, T. & Okita, T. W., Jul 1 2019, In : Plant Science. 284, p. 203-211 9 p.

Research output: Contribution to journalReview article

rice protein
storage proteins
multiprotein complexes
RNA
endoplasmic reticulum
2018
3 Citations (Scopus)

Circular and leaderless bacteriocins: Biosynthesis, mode of action, applications, and prospects

Perez, R. H., Zendo, T. & Sonomoto, K., Sep 4 2018, In : Frontiers in Microbiology. 9, SEP, 2085.

Research output: Contribution to journalReview article

Bacteriocins
Peptides
Protein Sorting Signals
Bioengineering
5 Citations (Scopus)

Diversified transporters and pathways for bacteriocin secretion in gram-positive bacteria

Zheng, S. & Sonomoto, K., May 1 2018, In : Applied Microbiology and Biotechnology. 102, 10, p. 4243-4253 11 p.

Research output: Contribution to journalReview article

Bacteriocins
Secretory Pathway
Gram-Positive Bacteria
Bacteria
Peptides
2017
43 Citations (Scopus)

Development of the gut microbiota in infancy and its impact on health in later life

Tanaka, M. & Nakayama, J., Oct 2017, In : Allergology International. 66, 4, p. 515-522 8 p.

Research output: Contribution to journalReview article

Immune System
Health
Immune System Diseases
Ecology
Gastrointestinal Tract
2016
8 Citations (Scopus)

Mathematical modeling and dynamic simulation of metabolic reaction systems using metabolome time series data

Sriyudthsak, K., Shiraishi, F. & Hirai, M. Y., May 3 2016, In : Frontiers in Molecular Biosciences. 3, MAY, 15.

Research output: Contribution to journalReview article

Metabolome
Metabolites
Metabolic Networks and Pathways
Time series
Computer simulation
44 Citations (Scopus)

Opportunities to overcome the current limitations and challenges for efficient microbial production of optically pure lactic acid

Abdelrahman, M. A. S. M. & Sonomoto, K., Oct 20 2016, In : Journal of Biotechnology. 236, p. 176-192 17 p.

Research output: Contribution to journalReview article

Lactic acid
Lactic Acid
Costs and Cost Analysis
Sugars
Fermentation
2015
4 Citations (Scopus)

Early endosomes motility in filamentous fungi: How and why they move

Higuchi, Y. & Steinberg, G., May 1 2015, In : Fungal Biology Reviews. 29, 1, p. 1-6 6 p.

Research output: Contribution to journalReview article

endosomes
Endosomes
Fungi
fungi
Ustilago zeae
104 Citations (Scopus)

Fermentative production of lactic acid from renewable materials: Recent achievements, prospects, and limits

Wang, Y., Tashiro, Y. & Sonomoto, K., Jan 1 2015, In : Journal of Bioscience and Bioengineering. 119, 1, p. 10-18 9 p.

Research output: Contribution to journalReview article

Lactic acid
Lactic Acid
Biodegradable Plastics
Industrial Waste
Cosmetics
73 Citations (Scopus)

Recent advances to improve fermentative butanol production: Genetic engineering and fermentation technology

Zheng, J., Tashiro, Y., Wang, Q. & Sonomoto, K., Jan 1 2015, In : Journal of Bioscience and Bioengineering. 119, 1, p. 1-9 9 p.

Research output: Contribution to journalReview article

Genetic engineering
Butanols
Genetic Engineering
Butenes
Fermentation
2014
8 Citations (Scopus)

Bacterial community structure and biochemical changes associated with composting of lignocellulosic oil palm empty fruit bunch

Zainudin, M. H. M., Hassan, M. A., Md Shah, U. K., Abdullah, N., Tokura, M., Yasueda, H., Shirai, Y., Sakai, K. & Baharuddin, A. S., Jan 23 2014, In : BioResources. 9, 1, p. 316-335 20 p.

Research output: Contribution to journalReview article

Composting
Palm oil
Fruits
composting
community structure

Essentiality of de novo L-serine synthesis for embryonic development and higher functions

Furuya, S., Sayano, T. & Esaki, K., 2014, In : Seikagaku. 86, 3, p. 372-381 10 p.

Research output: Contribution to journalReview article

Inborn Errors Carbohydrate Metabolism
Phosphoglycerate Dehydrogenase
Psychomotor Disorders
Mammalian Embryo
Microcephaly
1 Citation (Scopus)

Systems biology of amino acids

Okamoto, M., Jan 1 2014, In : Seikagaku. 86, 3, p. 307-317 11 p.

Research output: Contribution to journalReview article

Animals
Amino Acids
Systems Biology
2013
351 Citations (Scopus)

Recent advances in lactic acid production by microbial fermentation processes

Abdelrahman, M. A. S. M., Tashiro, Y. & Sonomoto, K., Nov 1 2013, In : Biotechnology Advances. 31, 6, p. 877-902 26 p.

Research output: Contribution to journalReview article

Lactic acid
Fermentation
Lactic Acid
Productivity
Dairy products
27 Citations (Scopus)

Screening and characterization of novel bacteriocins from lactic acid bacteria

Zendo, T., Jun 12 2013, In : Bioscience, Biotechnology and Biochemistry. 77, 5, p. 893-899 7 p.

Research output: Contribution to journalReview article

Bacteriocins
Lactic Acid
Bacteria
Screening
Nisin
2012
81 Citations (Scopus)

Antibacterial peptides "bacteriocins": An overview of their diverse characteristics and applications

Nishie, M., Nagao, J. I. & Sonomoto, K., Mar 29 2012, In : Biocontrol Science. 17, 1, p. 1-16 16 p.

Research output: Contribution to journalReview article

Bacteriocins
Peptides
Bacteria
Food Industry
Drug Industry

Galactose-Specific Recognition System in the Fission Yeast Schizosaccharomyces pombe

Matsuzawa, T., Ohashi, T., Nakase, M., Yoritsune, K. I. & Takegawa, K., Jan 1 2012, In : Trends in Glycoscience and Glycotechnology. 24, 135, p. 24-42 19 p.

Research output: Contribution to journalReview article

Schizosaccharomyces
Galactose
Yeast
Flocculation
Schizosaccharomyces pombe Proteins
2360 Citations (Scopus)

Guidelines for the use and interpretation of assays for monitoring autophagy

Klionsky, D. J., Abdalla, F. C., Abeliovich, H., Abraham, R. T., Acevedo-Arozena, A., Adeli, K., Agholme, L., Agnello, M., Agostinis, P., Aguirre-Ghiso, J. A., Ahn, H. J., Ait-Mohamed, O., Ait-Si-Ali, S., Akematsu, T., Akira, S., Al-Younes, H. M., Al-Zeer, M. A., Albert, M. L., Albin, R. L., Alegre-Abarrategui, J. & 1,249 others, Aleo, M. F., Alirezaei, M., Almasan, A., Almonte-Becerril, M., Amano, A., Amaravadi, R., Amarnath, S., Amer, A. O., Andrieu-Abadie, N., Anantharam, V., Ann, D. K., Anoopkumar-Dukie, S., Aoki, H., Apostolova, N., Arancia, G., Aris, J. P., Asanuma, K., Asare, N. Y. O., Ashida, H., Askanas, V., Askew, D. S., Auberger, P., Baba, M., Backues, S. K., Baehrecke, E. H., Bahr, B. A., Bai, X. Y., Bailly, Y., Baiocchi, R., Baldini, G., Balduini, W., Ballabio, A., Bamber, B. A., Bampton, E. T. W., Bánhegyi, G., Bartholomew, C. R., Bassham, D. C., Bast, R. C., Batoko, H., Bay, B. H., Beau, I., Béchet, D. M., Begley, T. J., Behl, C., Behrends, C., Bekri, S., Bellaire, B., Bendall, L. J., Benetti, L., Berliocchi, L., Bernardi, H., Bernassola, F., Besteiro, S., Bhatia-Kissova, I., Bi, X., Biard-Piechaczyk, M., Blum, J. S., Boise, L. H., Bonaldo, P., Boone, D. L., Bornhauser, B. C., Bortoluci, K. R., Bossis, I., Bost, F., Bourquin, J. P., Boya, P., Boyer-Guittaut, M., Bozhkov, P. V., Brady, N. R., Brancolini, C., Brech, A., Brenman, J. E., Brennand, A., Bresnick, E. H., Brest, P., Bridges, D., Bristol, M. L., Brookes, P. S., Brown, E. J., Brumell, J. H., Brunetti-Pierri, N., Brunk, U. T., Bulman, D. E., Bultman, S. J., Bultynck, G., Burbulla, L. F., Bursch, W., Butchar, J. P., Buzgariu, W., Bydlowski, S. P., Cadwell, K., Cahová, M., Cai, D., Cai, J., Cai, Q., Calabretta, B., Calvo-Garrido, J., Camougrand, N., Campanella, M., Campos-Salinas, J., Candi, E., Cao, L., Caplan, A. B., Carding, S. R., Cardoso, S. M., Carew, J. S., Carlin, C. R., Carmignac, V., Carneiro, L. A. M., Carra, S., Caruso, R. A., Casari, G., Casas, C., Castino, R., Cebollero, E., Cecconi, F., Celli, J., Chaachouay, H., Chae, H. J., Chai, C. Y., Chan, D. C., Chan, E. Y., Chang, R. C. C., Che, C. M., Chen, C. C., Chen, G. C., Chen, G. Q., Chen, M., Chen, Q., Chen, S. S. L., Chen, W. L., Chen, X., Chen, X., Chen, X., Chen, Y. G., Chen, Y., Chen, Y., Chen, Y. J., Chen, Z., Cheng, A., Cheng, C. H. K., Cheng, Y., Cheong, H., Cheong, J. H., Cherry, S., Chess-Williams, R., Cheung, Z. H., Chevet, E., Chiang, H. L., Chiarelli, R., Chiba, T., Chin, L. S., Chiou, S. H., Chisari, F. V., Cho, C. H., Cho, D. H., Choi, A. M. K., Choi, D. S., Choi, K. S., Choi, M. E., Chouaib, S., Choubey, D., Choubey, V., Chu, C. T., Chuang, T. H., Chueh, S. H., Chun, T., Chwae, Y. J., Chye, M. L., Ciarcia, R., Ciriolo, M. R., Clague, M. J., Clark, R. S. B., Clarke, P. G. H., Clarke, R., Codogno, P., Coller, H. A., Colombo, M. I., Comincini, S., Condello, M., Condorelli, F., Cookson, M. R., Coombs, G. H., Coppens, I., Corbalan, R., Cossart, P., Costelli, P., Costes, S., Coto-Montes, A., Couve, E., Coxon, F. P., Cregg, J. M., Crespo, J. L., Cronjé, M. J., Cuervo, A. M., Cullen, J. J., Czaja, M. J., D'Amelio, M., Darfeuille-Michaud, A., Davids, L. M., Davies, F. E., De Felici, M., De Groot, J. F., De Haan, C. A. M., De Martino, L., De Milito, A., De Tata, V., Debnath, J., Degterev, A., Dehay, B., Delbridge, L. M. D., Demarchi, F., Deng, Y. Z., Dengjel, J., Dent, P., Denton, D., Deretic, V., Desai, S. D., Devenish, R. J., Di Gioacchino, M., Di Paolo, G., Di Pietro, C., Díaz-Araya, G., Díaz-Laviada, I., Diaz-Meco, M. T., Diaz-Nido, J., Dikic, I., Dinesh-Kumar, S. P., Ding, W. X., Distelhorst, C. W., Diwan, A., Djavaheri-Mergny, M., Dokudovskaya, S., Dong, Z., Dorsey, F. C., Dosenko, V., Dowling, J. J., Doxsey, S., Dreux, M., Drew, M. E., Duan, Q., Duchosal, M. A., Duff, K., Dugail, I., Durbeej, M., Duszenko, M., Edelstein, C. L., Edinger, A. L., Egea, G., Eichinger, L., Eissa, N. T., Ekmekcioglu, S., El-Deiry, W. S., Elazar, Z., Elgendy, M., Ellerby, L. M., Er Eng, K., Engelbrecht, A. M., Engelender, S., Erenpreisa, J., Escalante, R., Esclatine, A., Eskelinen, E. L., Espert, L., Espina, V., Fan, H., Fan, J., Fan, Q. W., Fan, Z., Fang, S., Fang, Y., Fanto, M., Fanzani, A., Farkas, T., Farré, J. C., Faure, M., Fechheimer, M., Feng, C. G., Feng, J., Feng, Q., Feng, Y., Fésüs, L., Feuer, R., Figueiredo-Pereira, M. E., Fimia, G. M., Fingar, D. C., Finkbeiner, S., Finkel, T., Finley, K. D., Fiorito, F., Fisher, E. A., Fisher, P. B., Flajolet, M., Florez-McClure, M. L., Florio, S., Fon, E. A., Fornai, F., Fortunato, F., Fotedar, R., Fowler, D. H., Fox, H. S., Franco, R., Frankel, L. B., Fransen, M., Fuentes, J. M., Fueyo, J., Fujii, J., Fujisaki, K., Fujita, E., Fukuda, M., Furukawa, R. H., Gaestel, M., Gailly, P., Gajewska, M., Galliot, B., Galy, V., Ganesh, S., Ganetzky, B., Ganley, I. G., Gao, F. B., Gao, G. F., Gao, J., Garcia, L., Garcia-Manero, G., Garcia-Marcos, M., Garmyn, M., Gartel, A. L., Gatti, E., Gautel, M., Gawriluk, T. R., Gegg, M. E., Geng, J., Germain, M., Gestwicki, J. E., Gewirtz, D. A., Ghavami, S., Ghosh, P., Giammarioli, A. M., Giatromanolaki, A. N., Gibson, S. B., Gilkerson, R. W., Ginger, M. L., Ginsberg, H. N., Golab, J., Goligorsky, M. S., Golstein, P., Gomez-Manzano, C., Goncu, E., Gongora, C., Gonzalez, C. D., Gonzalez, R., González-Estévez, C., González-Polo, R. A., Gonzalez-Rey, E., Gorbunov, N. V., Gorski, S., Goruppi, S., Gottlieb, R. A., Gozuacik, D., Granato, G. E., Grant, G. D., Green, K. N., Gregorc, A., Gros, F., Grose, C., Grunt, T. W., Gual, P., Guan, J. L., Guan, K. L., Guichard, S. M., Gukovskaya, A. S., Gukovsky, I., Gunst, J., Gustafsson, A. B., Halayko, A. J., Hale, A. N., Halonen, S. K., Hamasaki, M., Han, F., Han, T., Hancock, M. K., Hansen, M., Harada, H., Harada, M., Hardt, S. E., Harper, J. W., Harris, A. L., Harris, J., Harris, S. D., Hashimoto, M., Haspel, J. A., Hayashi, S. I., Hazelhurst, L. A., He, C., He, Y. W., Hébert, M. J., Heidenreich, K. A., Helfrich, M. H., Helgason, G. V., Henske, E. P., Herman, B., Herman, P. K., Hetz, C., Hilfiker, S., Hill, J. A., Hocking, L. J., Hofman, P., Hofmann, T. G., Höhfeld, J., Holyoake, T. L., Hong, M. H., Hood, D. A., Hotamisligil, G. S., Houwerzijl, E. J., Høyer-Hansen, M., Hu, B., Hu, C. A. A., Hu, H. M., Hua, Y., Huang, C., Huang, J., Huang, S., Huang, W. P., Huber, T. B., Huh, W. K., Hung, T. H., Hupp, T. R., Hur, G. M., Hurley, J. B., Hussain, S. N. A., Hussey, P. J., Hwang, J. J., Hwang, S., Ichihara, A., Ilkhanizadeh, S., Inoki, K., Into, T., Iovane, V., Iovanna, J. L., Ip, N. Y., Isaka, Y., Ishida, H., Isidoro, C., Isobe, K. I., Iwasaki, A., Izquierdo, M., Izumi, Y., Jaakkola, P. M., Jäättelä, M., Jackson, G. R., Jackson, W. T., Janji, B., Jendrach, M., Jeon, J. H., Jeung, E. B., Jiang, H., Jiang, H., Jiang, J. X., Jiang, M., Jiang, Q., Jiang, X., Jiménez, A., Jin, M., Jin, S., Joe, C. O., Johansen, T., Johnson, D. E., Johnson, G. V. W., Jones, N. L., Joseph, B., Joseph, S. K., Joubert, A. M., Juhász, G., Juillerat-Jeanneret, L., Jung, C. H., Jung, Y. K., Kaarniranta, K., Kaasik, A., Kabuta, T., Kadowaki, M., Kagedal, K., Kamada, Y., Kaminskyy, V. O., Kampinga, H. H., Kanamori, H., Kang, C., Kang, K. B., Il Kang, K., Kang, R., Kang, Y. A., Kanki, T., Kanneganti, T. D., Kanno, H., Kanthasamy, A. G., Kanthasamy, A., Karantza, V., Kaushal, G. P., Kaushik, S., Kawazoe, Y., Ke, P. Y., Kehrl, J. H., Kelekar, A., Kerkhoff, C., Kessel, D. H., Khalil, H., Kiel, J. A. K. W., Kiger, A. A., Kihara, A., Kim, D. R., Kim, D. H., Kim, D. H., Kim, E. K., Kim, H. R., Kim, J. S., Kim, J. H., Kim, J. C., Kim, J. K., Kim, P. K., Kim, S. W., Kim, Y. S., Kim, Y., Kimchi, A., Kimmelman, A. C., King, J. S., Kinsella, T. J., Kirkin, V., Kirshenbaum, L. A., Kitamoto, K., Kitazato, K., Klein, L., Klimecki, W. T., Klucken, J., Knecht, E., Ko, B. C. B., Koch, J. C., Koga, H., Koh, J. Y., Koh, Y. H., Koike, M., Komatsu, M., Kominami, E., Kong, H. J., Kong, W. J., Korolchuk, V. I., Kotake, Y., Koukourakis, M. I., Kouri Flores, J. B., Kovács, A. L., Kraft, C., Krainc, D., Krämer, H., Kretz-Remy, C., Krichevsky, A. M., Kroemer, G., Krüger, R., Krut, O., Ktistakis, N. T., Kuan, C. Y., Kucharczyk, R., Kumar, A., Kumar, R., Kumar, S., Kundu, M., Kung, H. J., Kurz, T., Kwon, H. J., La Spada, A. R., Lafont, F., Lamark, T., Landry, J., Lane, J. D., Lapaquette, P., Laporte, J. F., László, L., Lavandero, S., Lavoie, J. N., Layfield, R., Lazo, P. A., Le, W., Le Cam, L., Ledbetter, D. J., Lee, A. J. X., Lee, B. W., Lee, G. M., Lee, J., Lee, J. H., Lee, M., Lee, M. S., Lee, S. H., Leeuwenburgh, C., Legembre, P., Legouis, R., Lehmann, M., Lei, H. Y., Lei, Q. Y., Leib, D. A., Leiro, J., Lemasters, J. J., Lemoine, A., Lesniak, M. S., Lev, D., Levenson, V. V., Levine, B., Levy, E., Li, F., Li, J. L., Li, L., Li, S., Li, W., Li, X. J., Li, Y. B., Li, Y. P., Liang, C., Liang, Q., Liao, Y. F., Liberski, P. P., Lieberman, A., Lim, H. J., Lim, K. L., Lim, K., Lin, C. F., Lin, F. C., Lin, J., Lin, J. D., Lin, K., Lin, W. W., Lin, W. C., Lin, Y. L., Linden, R., Lingor, P., Lippincott-Schwartz, J., Lisanti, M. P., Liton, P. B., Liu, B., Liu, C. F., Liu, K., Liu, L., Liu, Q. A., Liu, W., Liu, Y. C., Liu, Y., Lockshin, R. A., Lok, C. N., Lonial, S., Loos, B., Lopez-Berestein, G., López-Otín, C., Lossi, L., Lotze, M. T., Lõw, P., Lu, B., Lu, B., Lu, B., Lu, Z., Luciano, F., Lukacs, N. W., Lund, A. H., Lynch-Day, M. A., Ma, Y., Macian, F., MacKeigan, J. P., Macleod, K. F., Madeo, F., Maiuri, L., Maiuri, M. C., Malagoli, D., Malicdan, M. C. V., Malorni, W., Man, N., Mandelkow, E. M., Manon, S., Manov, I., Mao, K., Mao, X., Mao, Z., Marambaud, P., Marazziti, D., Marcel, Y. L., Marchbank, K., Marchetti, P., Marciniak, S. J., Marcondes, M., Mardi, M., Marfe, G., Mariño, G., Markaki, M., Marten, M. R., Martin, S. J., Martinand-Mari, C., Martinet, W., Martinez-Vicente, M., Masini, M., Matarrese, P., Matsuo, S., Matteoni, R., Mayer, A., Mazure, N. M., McConkey, D. J., McConnell, M. J., McDermott, C., McDonald, C., McInerney, G. M., McKenna, S. L., McLaughlin, B. A., McLean, P. J., McMaster, C. R., McQuibban, G. A., Meijer, A. J., Meisler, M. H., Meléndez, A., Melia, T. J., Melino, G., Mena, M. A., Menendez, J. A., Menna-Barreto, R. F. S., Menon, M. B., Menzies, F. M., Mercer, C. A., Merighi, A., Merry, D. E., Meschini, S., Meyer, C. G., Meyer, T. F., Miao, C. Y., Miao, J. Y., Michels, P. A. M., Michiels, C., Mijaljica, D., Milojkovic, A., Minucci, S., Miracco, C., Miranti, C. K., Mitroulis, I., Miyazawa, K., Mizushima, N., Mograbi, B., Mohseni, S., Molero, X., Mollereau, B., Mollinedo, F., Momoi, T., Monastyrska, I., Monick, M. M., Monteiro, M. J., Moore, M. N., Mora, R., Moreau, K., Moreira, P. I., Moriyasu, Y., Moscat, J., Mostowy, S., Mottram, J. C., Motyl, T., Moussa, C. E. H., Müller, S., Muller, S., Münger, K., Münz, C., Murphy, L. O., Murphy, M. E., Musarò, A., Mysorekar, I., Nagata, E., Nagata, K., Nahimana, A., Nair, U., Nakagawa, T., Nakahira, K., Nakano, H., Nakatogawa, H., Nanjundan, M., Naqvi, N. I., Narendra, D. P., Narita, M., Navarro, M., Nawrocki, S. T., Nazarko, T. Y., Nemchenko, A., Netea, M. G., Neufeld, T. P., Ney, P. A., Nezis, I. P., Nguyen, H. P., Nie, D., Nishino, I., Nislow, C., Nixon, R. A., Noda, T., Noegel, A. A., Nogalska, A., Noguchi, S., Notterpek, L., Novak, I., Nozaki, T., Nukina, N., Nürnberger, T., Nyfeler, B., Obara, K., Oberley, T. D., Oddo, S., Ogawa, M., Ohashi, T., Okamoto, K., Oleinick, N. L., Oliver, F. J., Olsen, L. J., Olsson, S., Opota, O., Osborne, T. F., Ostrander, G. K., Otsu, K., Ou, J. H. J., Ouimet, M., Overholtzer, M., Ozpolat, B., Paganetti, P., Pagnini, U., Pallet, N., Palmer, G. E., Palumbo, C., Pan, T., Panaretakis, T., Pandey, U. B., Papackova, Z., Papassideri, I., Paris, I., Park, J., Park, O. K., Parys, J. B., Parzych, K. R., Patschan, S., Patterson, C., Pattingre, S., Pawelek, J. M., Peng, J., Perlmutter, D. H., Perrotta, I., Perry, G., Pervaiz, S., Peter, M., Peters, G. J., Petersen, M., Petrovski, G., Phang, J. M., Piacentini, M., Pierre, P., Pierrefite-Carle, V., Pierron, G., Pinkas-Kramarski, R., Piras, A., Piri, N., Platanias, L. C., Pöggeler, S., Poirot, M., Poletti, A., Poüs, C., Pozuelo-Rubio, M., Prætorius-Ibba, M., Prasad, A., Prescott, M., Priault, M., Produit-Zengaffinen, N., Progulske-Fox, A., Proikas-Cezanne, T., Przedborski, S., Przyklenk, K., Puertollano, R., Puyal, J., Qian, S. B., Qin, L., Qin, Z. H., Quaggin, S. E., Raben, N., Rabinowich, H., Rabkin, S. W., Rahman, I., Rami, A., Ramm, G., Randall, G., Randow, F., Rao, V. A., Rathmell, J. C., Ravikumar, B., Ray, S. K., Reed, B. H., Reed, J. C., Reggiori, F., Régnier-Vigouroux, A., Reichert, A. S., Reiners, J. J., Reiter, R. J., Ren, J., Revuelta, J. L., Rhodes, C. J., Ritis, K., Rizzo, E., Robbins, J., Roberge, M., Roca, H., Roccheri, M. C., Rocchi, S., Rodemann, H. P., De Córdoba, S. R., Rohrer, B., Roninson, I. B., Rosen, K., Rost-Roszkowska, M. M., Rouis, M., Rouschop, K. M. A., Rovetta, F., Rubin, B. P., Rubinsztein, D. C., Ruckdeschel, K., Rucker, E. B., Rudich, A., Rudolf, E., Ruiz-Opazo, N., Russo, R., Rusten, T. E., Ryan, K. M., Ryter, S. W., Sabatini, D. M., Sadoshima, J., Saha, T., Saitoh, T., Sakagami, H., Sakai, Y., Salekdeh, G. H., Salomoni, P., Salvaterra, P. M., Salvesen, G., Salvioli, R., Sanchez, A. M. J., Sánchez-Alcázar, J. A., Sánchez-Prieto, R., Sandri, M., Sankar, U., Sansanwal, P., Santambrogio, L., Saran, S., Sarkar, S., Sarwal, M., Sasakawa, C., Sasnauskiene, A., Sass, M., Sato, K., Sato, M., Schapira, A. H. V., Scharl, M., Schätzl, H. M., Scheper, W., Schiaffino, S., Schneider, C., Schneider, M. E., Schneider-Stock, R., Schoenlein, P. V., Schorderet, D. F., Schüller, C., Schwartz, G. K., Scorrano, L., Sealy, L., Seglen, P. O., Segura-Aguilar, J., Seiliez, I., Seleverstov, O., Sell, C., Seo, J. B., Separovic, D., Setaluri, V., Setoguchi, T., Settembre, C., Shacka, J. J., Shanmugam, M., Shapiro, I. M., Shaulian, E., Shaw, R. J., Shelhamer, J. H., Shen, H. M., Shen, W. C., Sheng, Z. H., Shi, Y., Shibuya, K., Shidoji, Y., Shieh, J. J., Shih, C. M., Shimada, Y., Shimizu, S., Shintani, T., Shirihai, O. S., Shore, G. C., Sibirny, A. A., Sidhu, S. B., Sikorska, B., Silva-Zacarin, E. C. M., Simmons, A., Simon, A. K., Simon, H. U., Simone, C., Simonsen, A., Sinclair, D. A., Singh, R., Sinha, D., Sinicrope, F. A., Sirko, A., Siu, P. M., Sivridis, E., Skop, V., Skulachev, V. P., Slack, R. S., Smaili, S. S., Smith, D. R., Soengas, M. S., Soldati, T., Song, X., Sood, A. K., Soong, T. W., Sotgia, F., Spector, S. A., Spies, C. D., Springer, W., Srinivasula, S. M., Stefanis, L., Steffan, J. 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X., Zorzano, A., Zschocke, J. & Zuckerbraun, B., Apr 1 2012, In : Autophagy. 8, 4, p. 445-544 100 p.

Research output: Contribution to journalReview article

Autophagy
Guidelines
Lysosomes
Eukaryota
Research Personnel
2011
228 Citations (Scopus)

Lactic acid production from lignocellulose-derived sugars using lactic acid bacteria: Overview and limits

Abdelrahman, M. A. S. M., Tashiro, Y. & Sonomoto, K., Dec 20 2011, In : Journal of Biotechnology. 156, 4, p. 286-301 16 p.

Research output: Contribution to journalReview article

Lactic acid
Sugars
Lactic Acid
Bacteria
Biomass
5 Citations (Scopus)

Structural and functional diversity of lantibiotic immunity proteins

Okuda, K. I. & Sonomoto, K., Aug 1 2011, In : Current Pharmaceutical Biotechnology. 12, 8, p. 1231-1239 9 p.

Research output: Contribution to journalReview article

Bacteriocins
Immunity
Proteins
ATP-Binding Cassette Transporters
Lipoproteins
2010
19 Citations (Scopus)

Autophagy in the fission yeast Schizosaccharomyces pombe

Mukaiyama, H., Nakase, M., Nakamura, T., Kakinuma, Y. & Takegawa, K., Apr 1 2010, In : FEBS Letters. 584, 7, p. 1327-1334 8 p.

Research output: Contribution to journalReview article

Schizosaccharomyces
Autophagy
Yeast
Nitrogen
Starvation
78 Citations (Scopus)

Importance of the methanogenic archaea populations in anaerobic wastewater treatments

Tabatabaei, M., Rahim, R. A., Abdullah, N., Wright, A. D. G., Shirai, Y., Sakai, K., Sulaiman, A. & Hassan, M. A., Aug 1 2010, In : Process Biochemistry. 45, 8, p. 1214-1225 12 p.

Research output: Contribution to journalReview article

Archaea
Waste Water
Wastewater treatment
Wastewater
Dairies
23 Citations (Scopus)

The silkworm-an attractive bioresource supplied by Japan

Banno, Y., Shimada, T., Kajiura, Z. & Sezutsu, H., Jul 20 2010, In : Experimental Animals. 59, 2, p. 139-146 8 p.

Research output: Contribution to journalReview article

Bombyx
Modernization
silkworms
Japan
Experiments
13 Citations (Scopus)

The wild Oryza collection in National BioResource Project (NBRP) of Japan: History, biodiversity and utility

Nonomura, K. I., Morishima, H., Miyabayashi, T., Yamaki, S., Eiguchi, M., Kubo, T. & Kurata, N., Dec 1 2010, In : Breeding Science. 60, 5, p. 502-508 7 p.

Research output: Contribution to journalReview article

Oryza
Biodiversity
Japan
History
biodiversity
23 Citations (Scopus)

Use of N-methyl-N-nitrosourea treatment of fertilized egg cells for saturation mutagenesis of rice

Satoh, H., Matsusaka, H. & Kumamaru, T., Dec 1 2010, In : Breeding Science. 60, 5, p. 475-485 11 p.

Research output: Contribution to journalReview article

N-methyl-N-nitrosourea
Methylnitrosourea
Zygote
ova
mutagenesis
2009
105 Citations (Scopus)

Lantibiotics: Diverse activities and unique modes of action

Asaduzzaman, S. M. & Sonomoto, K., May 1 2009, In : Journal of Bioscience and Bioengineering. 107, 5, p. 475-487 13 p.

Research output: Contribution to journalReview article

Bacteriocins
Antibiotics
Anti-Bacterial Agents
Molecules
Peptides
2008
22 Citations (Scopus)

An essential role for de novo biosynthesis of L-serine in CNS development

Furuya, S., Jan 1 2008, In : Asia Pacific Journal of Clinical Nutrition. 17, SUPPL. 1, p. 312-315 4 p.

Research output: Contribution to journalReview article

Phosphoglycerate Dehydrogenase
Serine
Knockout Mice
Astrocytes
Microcephaly
49 Citations (Scopus)

Roles of L-serine and sphingolipid synthesis in brain development and neuronal survival

Hirabayashi, Y. & Furuya, S., May 1 2008, In : Progress in Lipid Research. 47, 3, p. 188-203 16 p.

Research output: Contribution to journalReview article

Sphingolipids
Serine
Brain
Neurons
Phosphatidylserines
2007
17 Citations (Scopus)

Recent advances in the generation of human monoclonal antibody

Yamashita, M., Katakura, Y. & Shirahata, S., Dec 1 2007, In : Cytotechnology. 55, 2-3, p. 55-60 6 p.

Research output: Contribution to journalReview article

Monoclonal antibodies
Monoclonal Antibodies
Antibodies
Bacteriophages
Antigens
2006
17 Citations (Scopus)

Molecular basis for the cellular senescence program and its application to anticancer therapy

Katakura, Y., May 29 2006, In : Bioscience, Biotechnology and Biochemistry. 70, 5, p. 1076-1081 6 p.

Research output: Contribution to journalReview article

Cell Aging
Cells
Oxidative stress
Transforming Growth Factors
Therapeutics
2004
8 Citations (Scopus)
Biochemical engineering
Biomedical Engineering
Fuzzy neural networks
Bioinformatics
Microarrays
53 Citations (Scopus)

Targeting of proteins to endoplasmic reticulum-derived compartments in plants. The importance of RNA localization

Crofts, A. J., Washida, H., Okita, T. W., Ogawa, M., Kumamaru, T. & Satoh, H., Nov 1 2004, In : Plant physiology. 136, 3, p. 3414-3419 6 p.

Research output: Contribution to journalReview article

Plant RNA
Plant Proteins
protein transport
Protein Biosynthesis
Protein Transport
2003
8 Citations (Scopus)

Heterologous expression and characterization of Schizosaccharomyces pombe vacuolar carboxypeptidase Y in Saccharamyces cerevisiae

Takegawa, K., Tokudomi, S., Bhuiyan, M. S. A., Tabuchi, M., Fujita, Y., Iwaki, T., Utsumi, S. & Tanaka, N., Feb 1 2003, In : Current Genetics. 42, 5, p. 252-259 8 p.

Research output: Contribution to journalReview article

Cathepsin A
Schizosaccharomyces
Saccharomyces cerevisiae
beta-Fructofuranosidase
Carboxypeptidases
47 Citations (Scopus)

Novel neuroglial and glioglial relationships mediated by L-serine metabolism

Furuya, S. & Watanabe, M., May 1 2003, In : Archives of Histology and Cytology. 66, 2, p. 109-121 13 p.

Research output: Contribution to journalReview article

Neuroglia
Serine
Neurons
Astrocytes
Phosphoglycerate Dehydrogenase
20 Citations (Scopus)

Role of phosphatidylinositol 3-phosphate in formation of forespore membrane in Schizosaccharomyces pombe

Onishi, M., Koga, T., Morita, R., Nakamura, Y., Nakamura, T., Shimoda, C., Takegawa, K., Hirata, A. & Fukui, Y., Feb 1 2003, In : Yeast. 20, 3, p. 193-206 14 p.

Research output: Contribution to journalReview article

Schizosaccharomyces
Phosphates
Membranes
Spores
Phosphatidylinositols

The modeling of gene regulatory networks

Tashiro, K. & Kuhara, S., Jan 1 2003, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 48, 11 Suppl, p. 1450-1456 7 p.

Research output: Contribution to journalReview article

Genetic Transcription
Gene Regulatory Networks
Genetic Models
Gene Expression Regulation
Gene Expression Profiling
2002
1 Citation (Scopus)

Glia-derived L-Ser regulating survival development and lipid synthesis of developing central neurons

Furuya, S., Mitoma, J. & Hirabayashi, Y., Jan 1 2002, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 47, 4 Suppl, p. 409-416 8 p.

Research output: Contribution to journalReview article

Carbohydrate Dehydrogenases
Phosphoglycerate Dehydrogenase
Membrane Microdomains
Infantile Spasms
Sphingolipids
1 Citation (Scopus)

Studies on dynamics of protein folding/unfolding by using the laser-induced temperature jump technique

Mizutani, Y., Yamamoto, K. & Kitagawa, T., Jan 1 2002, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 47, 6, p. 670-676 7 p.

Research output: Contribution to journalReview article

Phosphoric Acids
Physical Chemistry
Protein Unfolding
Pancreatic Ribonuclease
Protein Conformation
2001
71 Citations (Scopus)

Angiogenesis factors

Kuwano, M., Fukushi, J-I., Okamoto, M., Nishie, A., Goto, H., Ishibashi, T. & Ono, M., Jan 1 2001, In : Internal Medicine. 40, 7, p. 565-572 8 p.

Research output: Contribution to journalReview article

Angiogenesis Inducing Agents
Ephrin-B2
Hemangioblasts
Angiopoietin-1
Gene Knockout Techniques
8 Citations (Scopus)
Schizosaccharomyces
Biosynthetic Pathways
Oligosaccharides
Galactose
Yeast
1 Citation (Scopus)

Structure and mode of action of bacteriocins produced by lactic acid bacteria

Sonomoto, K. & Sashihara, T., Jan 1 2001, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 46, 4 Suppl, p. 323-332 10 p.

Research output: Contribution to journalReview article

Molecular Sequence Data
Antibiosis
Bacteriocins
Lactobacillus
Microbial Drug Resistance
2000
432 Citations (Scopus)

Class IIa bacteriocins: Biosynthesis, structure and activity

Ennahar, S., Sashihara, T., Sonomoto, K. & Ishizaki, A., Jan 1 2000, In : FEMS Microbiology Reviews. 24, 1, p. 85-106 22 p.

Research output: Contribution to journalReview article

Bacteriocins
Lactic Acid
Bacteria
Peptides
Biochemistry
1999
96 Citations (Scopus)

Class IIa bacteriocins from lactic acid bacteria: Antibacterial activity and food preservation

Ennahar, S., Sonomoto, K. & Ishizaki, A., Jan 1 1999, In : Journal of Bioscience and Bioengineering. 87, 6, p. 705-716 12 p.

Research output: Contribution to journalReview article

Food preservation
Food Preservation
Bacteriocins
Lactic acid
Lactic Acid
1998

Strategy for diversification of industrial application of lactic acid microorganism

Ishizaki, A., Sonomoto, K., Okada, S., Amachi, S., Ishikawa, K., Yokota, A., Tomita, F., Doi, K., Eguchi, S., Akiyoshi, N., Inagaki, F., Fujio, Y., Tanaka, O., Ohmomo, S., Ogata, S., Kobayashi, O., Hiyama, K., Etoh, S., Kato, T., Shioya, S. & 11 others, Shimizu, H., Uchiyama, K., Morita, M., Shimizu, K., Suzuki, T., Ohashi, R., Yamamoto, T., Yin, P., Park, Y., Okabe, M. & Ohara, H., Dec 1 1998, In : Seibutsu-kogaku Kaishi. 76, 11, p. 451-468 18 p.

Research output: Contribution to journalReview article

1985

Regulation of rDNA transcription in Xenopus embryogenesis

Shiokawa, K., Tashiro, K., Furuno, N., Misumi, Y. & Takeichi, T., Dec 1 1985, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 30, 14 Suppl, p. 1534-1549 16 p.

Research output: Contribution to journalReview article