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Research Output 1995 2019

  • 515 Citations
  • 11 h-Index
  • 63 Article
  • 3 Comment/debate
  • 2 Review article
2019

Spatiotemporal analysis of pine wilt disease: Relationship between pinewood nematode distribution and defence response in Pinus thunbergii seedlings

Yamaguchi, R., Matsunaga, K., Hirao, T., Tamura, M. & Watanabe, A., Aug 1 2019, In : Forest Pathology. 49, 4, e12518.

Research output: Contribution to journalArticle

spatiotemporal analysis
Pinus thunbergii
Bursaphelenchus xylophilus
wilt
nematode
2018
7 Citations (Scopus)
tracheary elements
lignification
cell suspension culture
transporters
Arabidopsis thaliana

Genetic variation of root traits of cuttings and their relation to early shoot growth in Cryptomeria japonica

Fukuda, Y., Hiraoka, Y., Ohira, M., Takahashi, M., Iki, T., Miura, M., Kurita, M. & Watanabe, A., Jan 1 2018, In : Nihon Ringakkai Shi/Journal of the Japanese Forestry Society. 100, 6, p. 218-223 6 p.

Research output: Contribution to journalArticle

Open Access
Cryptomeria japonica
shoot growth
genetic variation
shoots
surface area

Historical seed use and transfer affects geographic specificity in genetic diversity and structure of old planted Pinus thunbergii populations

Iwaizumi, M. G., Miyata, S., Hirao, T., Tamura, M. & Watanabe, A., Jan 15 2018, In : Forest Ecology and Management. 408, p. 211-219 9 p.

Research output: Contribution to journalArticle

Pinus thunbergii
genetic structure
genetic variation
seed
seeds
6 Citations (Scopus)

Identification of novel putative causative genes and genetic marker for male sterility in Japanese cedar (Cryptomeria japonica D.Don)

Mishima, K., Hirao, T., Tsubomura, M., Tamura, M., Kurita, M., Nose, M., Hanaoka, S., Takahashi, M. & Watanabe, A., Apr 23 2018, In : BMC Genomics. 19, 1, 277.

Research output: Contribution to journalArticle

Cryptomeria
Male Infertility
Genetic Markers
Genes
Single Nucleotide Polymorphism
1 Citation (Scopus)

Potential of genome-wide studies in unrelated plus trees of a coniferous species, cryptomeria japonica (japanese cedar)

Hiraoka, Y., Fukatsu, E., Mishima, K., Hirao, T., Teshima, K., Tamura, M., Tsubomura, M., Iki, T., Kurita, M., Takahashi, M. & Watanabe, A., Sep 10 2018, In : Frontiers in Plant Science. 9, 1322.

Research output: Contribution to journalArticle

plus trees
Cryptomeria japonica
single nucleotide polymorphism
genome
prediction
2 Citations (Scopus)

The gene expression analysis of Arabidopsis thaliana ABC transporters by real-time PCR for screening monolignol-transporter candidates

Takeuchi, M., Watanabe, A., Tamura, M. & Tsutsumi, Y., Oct 1 2018, In : Journal of Wood Science. 64, 5, p. 477-484 8 p.

Research output: Contribution to journalArticle

ATP-Binding Cassette Transporters
Adenosinetriphosphate
Gene expression
Screening
Genes

The origin of wild populations of Toxicodendron succedaneum on mainland Japan revealed by genetic variation in chloroplast and nuclear DNA

Hiraoka, Y., Tamaki, I. & Watanabe, A., Mar 1 2018, In : Journal of Plant Research. 131, 2, p. 225-238 14 p.

Research output: Contribution to journalArticle

Toxicodendron
chloroplast DNA
nuclear genome
Japan
genetic variation

Transcriptome dynamics of rooting zone and aboveground parts of cuttings during adventitious root formation in Cryptomeria japonica D. Don

Fukuda, Y., Hirao, T., Mishima, K., Ohira, M., Hiraoka, Y., Takahashi, M. & Watanabe, A., Sep 19 2018, In : BMC plant biology. 18, 1, 201.

Research output: Contribution to journalArticle

Cryptomeria japonica
adventitious roots
transcriptome
aerial parts
rooting
2017
4 Citations (Scopus)

Species characteristics and intraspecific variation in growth and photosynthesis of Cryptomeria japonica under elevated O 3 and CO 2

Hiraoka, Y., Iki, T., Nose, M., Tobita, H., Yazaki, K., Watanabe, A., Fujisawa, Y. & Kitao, M., Jun 1 2017, In : Tree physiology. 37, 6, p. 733-743 11 p.

Research output: Contribution to journalArticle

Cryptomeria
Cryptomeria japonica
Photosynthesis
Carbon Monoxide
photosynthesis
2016
5 Citations (Scopus)

Biological activities of extracts from different parts of cryptomeria japonica

Horiba, H., Nakagawa, T., Zhu, Q., Ashour, A., Watanabe, A. & Shimizu, K., Jan 1 2016, In : Natural product communications. 11, 9, p. 1337-1342 6 p.

Research output: Contribution to journalArticle

Cryptomeria
Cryptomeria japonica
Methanol
bioactive properties
Pollen
6 Citations (Scopus)

Determination of male strobilus developmental stages by cytological and gene expression analyses in Japanese cedar (Cryptomeria japonica)

Tsubomura, M., Kurita, M. & Watanabe, A., May 15 2016, In : Tree physiology. 36, 5, p. 653-666 14 p.

Research output: Contribution to journalArticle

Cryptomeria
Cryptomeria japonica
developmental stages
Gene Expression
gene expression

Effects of physical characteristics of rooting media on the rooting of Cryptomeria japonica cuttings

Ohira, M., Hanaoka, S., Hiraoka, Y., Kurita, M., Iki, T., Miura, M. & Watanabe, A., Jan 1 2016, In : Nihon Ringakkai Shi/Journal of the Japanese Forestry Society. 98, 6, p. 265-272 8 p.

Research output: Contribution to journalArticle

Cryptomeria japonica
rooting
mist irrigation
water content
air

Erratum to: Transcriptome sequencing and profiling of expressed genes in cambial zone and differentiating xylem of Japanese cedar (Cryptomeria japonica)[BMC Genomics, 15, (2014) (219)], DOI: 10.1186/1471-2164-15-219

Mishima, K., Fujiwara, T., Iki, T., Kuroda, K., Yamashita, K., Tamura, M., Fujisawa, Y. & Watanabe, A., Oct 17 2016, In : BMC Genomics. 17, 1, 803.

Research output: Contribution to journalComment/debate

Cryptomeria
Xylem
Gene Expression Profiling
Genomics
Publications

The effect of genotype and planting density on the growth patterns and selection of local varieties of Sugi (Cryptomeria japonica)

Sato, Y., Fukatsu, E., Hiraoka, Y., Watanabe, A. & Takahashi, M., Jan 1 2016, In : Nihon Ringakkai Shi/Journal of the Japanese Forestry Society. 98, 2, p. 45-52 8 p.

Research output: Contribution to journalArticle

Cryptomeria japonica
genotype
planting
plantation
plantations
2015
3 Citations (Scopus)

Analyses of random BAC clone sequences of Japanese cedar, Cryptomeria japonica

Tamura, M., Hisataka, Y., Moritsuka, E., Watanabe, A., Uchiyama, K., Futamura, N., Shinohara, K., Tsumura, Y. & Tachida, H., Jun 1 2015, In : Tree Genetics and Genomes. 11, 3

Research output: Contribution to journalArticle

Cryptomeria
Bacterial Artificial Chromosomes
bacterial artificial chromosomes
Cryptomeria japonica
Pinaceae
1 Citation (Scopus)
plus trees
tree breeding
Cryptomeria japonica
forest trees
breeding
4 Citations (Scopus)
chloroplast
genetic structure
polymorphism
seed
genetic resource
genetic variation
Picea
microsatellite repeats
Japan
marker
1 Citation (Scopus)

Highly polymorphic nuclear microsatellite markers reveal detailed patterns of genetic variation in natural populations of Yezo spruce in Hokkaido

Iwazumi, M. G., Aizawa, M., Watanabe, A. & Goto, S., Jan 1 2015, In : Journal of Forest Research. 20, 2, p. 301-307 7 p.

Research output: Contribution to journalArticle

genetic variation
Picea
Picea jezoensis
microsatellite repeats
Japan
2014
9 Citations (Scopus)
Cryptomeria japonica
transcriptome
circadian rhythm
winter
summer
9 Citations (Scopus)

Comparison of histological responses and tissue damage expansion between resistant and susceptible Pinus thunbergii infected with pine wood nematode Bursaphelenchus xylophilus

Kusumoto, D., Yonemichi, T., Inoue, H., Hirao, T., Watanabe, A. & Yamada, T., Jan 1 2014, In : Journal of Forest Research. 19, 2, p. 285-294 10 p.

Research output: Contribution to journalArticle

Pinus thunbergii
Bursaphelenchus xylophilus
nematode
damage
cambium
6 Citations (Scopus)

Construction of a core collection and evaluation of genetic resources for Cryptomeria japonica (Japanese cedar)

Miyamoto, N., Ono, M. & Watanabe, A., Jan 1 2014, In : Journal of Forest Research. 20, 1, p. 186-196 11 p.

Research output: Contribution to journalArticle

plus trees
Cryptomeria japonica
genetic resource
genetic resources
genetic marker

Evaluation of the growth traits of Toxicodendron vernicifluum progeny based on their genetic groups assigned using new microsatellite markers

Hiraoka, Y., Hanaoka, S., Watanabe, A., Kawahara, T. & Tabata, M., Jan 1 2014, In : Silvae Genetica. 63, 6, p. 267-274 8 p.

Research output: Contribution to journalArticle

Toxicodendron
Toxicodendron vernicifluum
growth traits
Microsatellite Repeats
microsatellite repeats
2 Citations (Scopus)

Genetic structures of Calophyllum inophyllum L., a tree employing sea-drift seed dispersal in the northern extreme of its distribution

Hanaoka, S., Chien, C. T., Chen, S. Y., Watanabe, A., Setsuko, S. & Kato, K., Jan 1 2014, In : Annals of Forest Science. 71, 5, p. 575-584 10 p.

Research output: Contribution to journalArticle

Calophyllum inophyllum
seed dispersal
genetic structure
gene flow
genetic differentiation
6 Citations (Scopus)

Population genetic structure and the effect of historical human activity on the genetic variability of cryptomeria Japonica core collection, in Japan

Uchiyama, K., Miyamoto, N., Takahashi, M., Watanabe, A. & Tsumura, Y., Jan 1 2014, In : Tree Genetics and Genomes. 10, 5, p. 1257-1270 14 p.

Research output: Contribution to journalArticle

Cryptomeria
Cryptomeria japonica
Genetic Structures
Population Genetics
Human Activities
20 Citations (Scopus)

Transcriptome sequencing and profiling of expressed genes in cambial zone and differentiating xylem of Japanese cedar (Cryptomeria japonica)

Mishima, K., Fujiwara, T., Iki, T., Kuroda, K., Yamashita, K., Tamura, M., Fujisawa, Y. & Watanabe, A., Mar 20 2014, In : BMC Genomics. 15, 1, 219.

Research output: Contribution to journalArticle

Cryptomeria
Xylem
Gene Expression Profiling
Genes
Expressed Sequence Tags
2013
24 Citations (Scopus)

Demonstration of genome-wide association studies for identifying markers for wood property and male strobili traits in Cryptomeria japonica

Uchiyama, K., Iwata, H., Moriguchi, Y., Ujino-Ihara, T., Ueno, S., Taguchi, Y., Tsubomura, M., Mishima, K., Iki, T., Watanabe, A., Futamura, N., Shinohara, K. & Tsumura, Y., Nov 19 2013, In : PloS one. 8, 11, e79866.

Research output: Contribution to journalArticle

Cryptomeria
Cryptomeria japonica
wood properties
Genome-Wide Association Study
single nucleotide polymorphism

Development of tetranucleotide microsatellite markers in Pinus kesiya Royle ex Gordon

Thao, D. V., Yamashita, M., Watanabe, A. & Shiraishi, S., May 3 2013, In : Conservation Genetics Resources. 5, 2, p. 405-407 3 p.

Research output: Contribution to journalArticle

Pinus kesiya
Pinus
Vietnam
Microsatellite Repeats
Alleles
3 Citations (Scopus)
plus trees
Cryptomeria japonica
male flowers
clone
flower
5 Citations (Scopus)

Influence of long-distance seed dispersal on the genetic diversity of seed rain in fragmented Pinus densiflora populations relative to Pollen-Mediated gene flow

Ozawa, H., Watanabe, A., Uchiyama, K., Saito, Y. & Ide, Y., Jul 1 2013, In : Journal of Heredity. 104, 4, p. 465-475 11 p.

Research output: Contribution to journalArticle

Seed Dispersal
Pinus
Gene Flow
Rain
Pollen
1 Citation (Scopus)

Isolation and characterization of tetranucleotide microsatellite markers for Pinus merkusii

Thao, D. V., Widyatmoko, A. Y. P. B. C., Guan, L., Gotoh, E., Watanabe, A. & Shiraishi, S., May 3 2013, In : Conservation Genetics Resources. 5, 2, p. 433-436 4 p.

Research output: Contribution to journalArticle

Pinus merkusii
Pinus
Microsatellite Repeats
microsatellite repeats
Southeastern Asia
4 Citations (Scopus)

The promoter of an A9 homolog from the conifer Cryptomeria japonica imparts male strobilus-dominant expression in transgenic trees

Kurita, M., Konagaya, K. I., Watanabe, A., Kondo, T., Ishii, K. & Taniguchi, T., 2013, In : Plant Cell Reports. 32, 2, p. 319-328 10 p.

Research output: Contribution to journalArticle

Cryptomeria japonica
conifers
promoter regions
gene expression
microsporocytes
2012
43 Citations (Scopus)

Characterization of resistance to pine wood nematode infection in Pinus thunbergii using suppression subtractive hybridization

Hirao, T., Fukatsu, E. & Watanabe, A., Jan 24 2012, In : BMC plant biology. 12, 13.

Research output: Contribution to journalArticle

Pinus thunbergii
Bursaphelenchus xylophilus
suppression subtractive hybridization
nematode infections
genes
24 Citations (Scopus)

Extended linkage disequilibrium in noncoding regions in a conifer, Cryptomeria Japonica

Moritsuka, E., Hisataka, Y., Tamura, M., Uchiyama, K., Watanabe, A., Tsumura, Y. & Tachida, H., Mar 1 2012, In : Genetics. 190, 3, p. 1145-1148 4 p.

Research output: Contribution to journalComment/debate

Cryptomeria
Coniferophyta
Linkage Disequilibrium
Genetic Recombination
Cupressaceae
1 Citation (Scopus)

Genetic diversity and structure using microsatellite markers in natural and breeding populations of thujopsis dolabrata var. Hondae

Higuchi, Y., Matsumoto, A., Moriguchi, Y., Mishima, K., Tanaka, K., Yada, Y., Takata, K., Watanabe, A., Hirao, T. & Tsumura, Y., Dec 10 2012, In : Nihon Ringakkai Shi/Journal of the Japanese Forestry Society. 94, 5, p. 247-251 5 p.

Research output: Contribution to journalArticle

Thujopsis dolabrata
breeding population
genetic structure
microsatellite repeats
genetic variation
2 Citations (Scopus)

Genetic diversity of Pinus densiflora pollen flowing over fragmented populations during a mating season

Ozawa, H., Watanabe, A., Uchiyama, K., Saito, Y. & Ide, Y., Jan 1 2012, In : Journal of Forest Research. 17, 6, p. 488-498 11 p.

Research output: Contribution to journalArticle

Pinus densiflora
breeding season
pollen
genetic variation
clone
4 Citations (Scopus)

Isolation and characterization of microsatellite markers for Thujopsis dolabrata var. hondai (Cupressaceae)

Mishima, K., Hirao, T., Watanabe, A. & Takata, K., Aug 1 2012, In : American Journal of Botany. 99, 8

Research output: Contribution to journalArticle

Thujopsis dolabrata
Cupressaceae
Microsatellite Repeats
tree breeding
breeding
6 Citations (Scopus)

Isolation and characterization of microsatellite markers in Melia volkensii Gurke

Hanaoka, S., Muturi, G. M. & Watanabe, A., Dec 1 2012, In : Conservation Genetics Resources. 4, 2, p. 395-398 4 p.

Research output: Contribution to journalArticle

Melia
Kenya
Microsatellite Repeats
microsatellite repeats
heterozygosity
1 Citation (Scopus)

Japanese beech (Fagus crenata) plantations established from seedlings of non-native genetic lineages

Koyama, Y., Takahashi, M., Murauchi, Y., Fukatsu, E., Watanabe, A. & Tomaru, N., Feb 1 2012, In : Journal of Forest Research. 17, 1, p. 116-120 5 p.

Research output: Contribution to journalArticle

Fagus crenata
haplotypes
plantation
plantations
seedling
4 Citations (Scopus)

Phylogeographical structure in Zelkova serrata in Japan and phylogeny in the genus Zelkova using the polymorphisms of chloroplast DNA

Fukatsu, E., Watanabe, A., Nakada, R., Isoda, K., Hirao, T., Ubukata, M., Koyama, Y., Kodani, J., Saito, M., Miyamoto, N. & Takahashi, M., Aug 1 2012, In : Conservation Genetics. 13, 4, p. 1109-1118 10 p.

Research output: Contribution to journalArticle

Ulmaceae
Zelkova serrata
Zelkova
Chloroplast DNA
Phylogeny
2011
1 Citation (Scopus)
Toxicodendron
plus trees
Ryukyu Archipelago
chloroplast
cultivar
1 Citation (Scopus)

Primer note: Development of highly polymorphic nuclear microsatellite markers for hinoki (Chamaecyparis obtusa)

Iwaizumi, M. G., Watanabe, A. & Isoda, K., Dec 1 2011, In : Silvae Genetica. 60, 2, p. 62-65 4 p.

Research output: Contribution to journalArticle

Chamaecyparis
Chamaecyparis obtusa
Microsatellite Repeats
Breeding
elite trees
8 Citations (Scopus)

Spatiotemporal gene expression profiles associated with male strobilus development in Cryptomeria japonica by suppression subtractive hybridization

Kurita, M., Taniguchi, T., Nakada, R., Kondo, T. & Watanabe, A., Jul 1 2011, In : Breeding Science. 61, 2, p. 174-182 9 p.

Research output: Contribution to journalArticle

Cryptomeria
suppression subtractive hybridization
Cryptomeria japonica
Transcriptome
Libraries
5 Citations (Scopus)

The Evaluation of Wood Properties of Standing Trees in Sugi (Cryptomeria japonica) Plus Tree Clones Selected in Kanto Breeding Region

Mishima, K., Iki, T., Hiraoka, Y., Miyamoto, N. & Watanabe, A., Jan 1 2011, In : Mokuzai Gakkaishi/Journal of the Japan Wood Research Society. 57, 5, p. 256-264 9 p.

Research output: Contribution to journalArticle

Wood
2010
4 Citations (Scopus)
Rhus
genetic relationships
microsatellite repeats
clones
Ryukyu Archipelago
15 Citations (Scopus)

Simultaneous evaluation of paternal and maternal immigrant gene flow and the implications for the overall genetic composition of pinus densiflora dispersed seeds

Iwaizumi, M. G., Takahashi, M., Watanabe, A. & Ubukata, M., Mar 1 2010, In : Journal of Heredity. 101, 2, p. 144-153 10 p.

Research output: Contribution to journalArticle

Pinus
Gene Flow
Germ Cells
Seeds
Mothers
2009
11 Citations (Scopus)

A frameshift mutation of the chloroplast mat K coding region is associated with chlorophyll deficiency in the Cryptomeria japonica virescent mutant Wogon-Sugi

Hirao, T., Watanabe, A., Kurita, M., Kondo, T. & Takata, K., May 18 2009, In : Current Genetics. 55, 3, p. 311-321 11 p.

Research output: Contribution to journalReview article

Cryptomeria
Frameshift Mutation
Chloroplasts
Chlorophyll
Chloroplast DNA
2 Citations (Scopus)

Development and characterization of chloroplast microsatellite markers for Cryptomeria japonica D. Don

Hirao, T., Watanabe, A., Miyamoto, N. & Takata, K., Jan 1 2009, In : Molecular Ecology Resources. 9, 1, p. 122-124 3 p.

Research output: Contribution to journalArticle

Cryptomeria
Cryptomeria japonica
Chloroplasts
chloroplast
Microsatellite Repeats
9 Citations (Scopus)

Isolation and characterization of microsatellite markers from Robinia pseudoacacia L.

Mishima, K., Hirao, T., Urano, S., Watanabe, A. & Takata, K., May 1 2009, In : Molecular Ecology Resources. 9, 3, p. 850-852 3 p.

Research output: Contribution to journalArticle

Robinia
Robinia pseudoacacia
Microsatellite Repeats
microsatellite repeats
heterozygosity