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Research Output 1993 2019

1993
14 Citations (Scopus)

Sporulation-Inhibitory Gene in Pock-forming Plasmid pSA1.1 of Streptomyces Azureus

Tomura, T., Kishino, H., Doi, K., Hara, T., Ogata, S. & Kuhara, S., Jan 1 1993, In : Bioscience, Biotechnology, and Biochemistry. 57, 3, p. 438-443 6 p.

Research output: Contribution to journalArticle

Streptomyces
Plasmids
Genes
Kanamycin Resistance
Mycelium
1994
4 Citations (Scopus)

Relationship between the Quality of Italian Ryegrass Silage and the Presence of Phages for Silage-Making Lactobacilli

Kaneshige, N., Tanaka, S., Zong, Y., Ohmomo, S., Nlshiyama, K., Doi, K. & Ogata, S., Jan 1 1994, In : Nippon Nogeikagaku Kaishi. 68, 8, p. 1219-1221 3 p.

Research output: Contribution to journalArticle

Lolium
Bacteriophages
Silage
silage making
Lolium multiflorum
1995
9 Citations (Scopus)

Plasmid formation and its relation to the formation of spontaneously developing pocks in Streptomyces azureus ATCC 14921

Doi, K., Saeki, M. C., Ono, Y. & Ogata, S., Jan 1 1995, In : Journal of Applied Bacteriology. 79, 3, p. 237-243 7 p.

Research output: Contribution to journalArticle

Mycelium
Streptomyces
Plasmids
5 Citations (Scopus)

Two Plasmids Related to Spontaneously Developing Pocks in Streptomyces Laurentii

Kinoshita-iramina, C., Kitahara, M., Harada, Y., Doi, K. & Ogata, S., Jan 1 1995, In : Bioscience, biotechnology, and biochemistry. 59, 6, p. 1040-1043 4 p.

Research output: Contribution to journalArticle

Streptomyces
Plasmids
Chromosomes
1996
7 Citations (Scopus)

Detection of the single-stranded DNA of Streptomyces plasmid pSA1.1 and a binding histone-like protein

Yokoyama, E., Doi, K., Kimura, M. & Ogata, S., May 1 1996, In : FEMS microbiology letters. 138, 2-3, p. 197-200 4 p.

Research output: Contribution to journalArticle

Single-Stranded DNA
Streptomyces
Histones
Plasmids
Proteins

Gene targeting in antibiotics-producing actinomycetes

Doi, K., Yokoyama, E. & Ogata, S., Jan 1 1996, In : Nippon Nogeikagaku Kaishi. 70, 8, p. 889-892 4 p.

Research output: Contribution to journalArticle

Genes
Anti-Bacterial Agents
1997
6 Citations (Scopus)

A Conjugative Linear Plasmid in Streptomyces laurentii ATCC31255

Kinoshita-Iramina, C., Ahara, M. K., Doi, K. & Ogata, S., Jan 1 1997, In : Bioscience, Biotechnology and Biochemistry. 61, 9, p. 1469-1473 5 p.

Research output: Contribution to journalArticle

Streptomyces
Plasmids
Thiostrepton
Mycelium
DNA
4 Citations (Scopus)

Cloning and sequencing of the hup gene encoding the histone-like protein HS1 of Streptomyces lividans

Yokoyama, E., Doi, K. & Ogata, S., Aug 7 1997, In : Biochimica et Biophysica Acta - Gene Structure and Expression. 1353, 2, p. 103-106 4 p.

Research output: Contribution to journalArticle

Streptomyces lividans
Gene encoding
Cloning
Organism Cloning
Molecular mass
23 Citations (Scopus)

Microbial participation in the formation of siliceous deposits from geothermal water and analysis of the extremely thermophilic bacterial community

Inagaki, F., Hayashi, S., Doi, K., Motomura, Y., Izawa, E. & Ogata, S., Sep 1 1997, In : FEMS microbiology ecology. 24, 1, p. 41-48 8 p.

Research output: Contribution to journalArticle

siliceous deposit
thermophilic bacterium
clone
Clone Cells
DNA
1998
25 Citations (Scopus)

Bio-deposition of amorphous silica by an extremely thermophilic bacterium, thermus spp

Inagaki, F., Yokoyama, T., Doi, K., Izawa, E. & Ogata, S., Jan 1 1998, In : Bioscience, Biotechnology and Biochemistry. 62, 6, p. 1271-1272 2 p.

Research output: Contribution to journalArticle

Thermus
Silicon Dioxide
Bacteria
Solubility
Minerals
14 Citations (Scopus)

Effects of bacitracin and excess Mg2+ on submerged mycelial growth of Streptomyces azureus

Okba, A. K., Ogata, T., Matsubara, H., Matsuo, S., Doi, K. & Ogata, S., Jan 1 1998, In : Journal of Fermentation and Bioengineering. 86, 1, p. 28-33 6 p.

Research output: Contribution to journalArticle

Bacitracin
Streptomyces
Growth
Ethylenediaminetetraacetic acid
Edetic Acid
7 Citations (Scopus)

Gene encoding a replication initiator protein and replication origin of conjugative plasmid pSA1.1 of Streptomyces cyaneus ATCC 14921

Yokoyama, E., Matsuzaki, Y., Doi, K. & Ogata, S., Dec 1 1998, In : FEMS microbiology letters. 169, 1, p. 103-109 7 p.

Research output: Contribution to journalArticle

Replication Origin
Streptomyces
Plasmids
Bacteriophages
Genes

Histone-like protein of Streptomyces lividans

Yokoyama, E., Doi, K., Kimura, M., Kuhara, S. & Ogata, S., Mar 1 1998, In : Journal of the Faculty of Agriculture, Kyushu University. 42, 3-4, p. 473-482 10 p.

Research output: Contribution to journalArticle

Streptomyces lividans
histones
Histones
Protein S
Proteins

Strategy for diversification of industrial application of lactic acid microorganism

Ishizaki, A., Sonomoto, K., Okada, S., Amachi, S., Ishikawa, K., Yokota, A., Tomita, F., Doi, K., Eguchi, S., Akiyoshi, N., Inagaki, F., Fujio, Y., Tanaka, O., Ohmomo, S., Ogata, S., Kobayashi, O., Hiyama, K., Etoh, S., Kato, T., Shioya, S. & 11 others, Shimizu, H., Uchiyama, K., Morita, M., Shimizu, K., Suzuki, T., Ohashi, R., Yamamoto, T., Yin, P., Park, Y., Okabe, M. & Ohara, H., Dec 1 1998, In : Seibutsu-kogaku Kaishi. 76, 11, p. 451-468 18 p.

Research output: Contribution to journalReview article

2 Citations (Scopus)

Transformation of silage-making Lactobacillus strains by electroporation with plasmid vectors

Fan, G., Takahashi, E., Doi, K., Matsuo, S., Tanaka, O., Ohmomo, S. & Ogata, S., Nov 1 1998, In : Journal of the Faculty of Agriculture, Kyushu University. 43, 1-2, p. 217-225 9 p.

Research output: Contribution to journalArticle

plasmid vectors
Silage
Electroporation
electroporation
silage making
10 Citations (Scopus)
Gene transfer
Actinobacteria
Streptomyces
Chromosomes
Plasmids
1999

A Giant Phage Taillike Particle of Clostridium Saccharoperbutylacetonicum ATCC13564

Ogata, S., Nishiyama, T., Doi, K., Yoshino, S., Kato, F. & Ackermann, H. W., Nov 1999, In : Journal of the Faculty of Agriculture, Kyushu University. 44, 1-2, p. 127-135 9 p.

Research output: Contribution to journalArticle

Clostridium saccharoperbutylacetonicum
Clostridium
bacteriophages
Bacteriophages
mitomycin

Stimulatory effects of bacitracin on sporulation and mycelial growth in thiostrepton-producing Streptomyces cyaneus ATCC 14921 and Streptomyces laurentii ATCC 31255

Okba, A. K., Ogata, T., Matsubara, H., Tawara, Y., Abou-Shousha, A., Matsuo, S., Doi, K. & Ogata, S., Feb 1 1999, In : Journal of the Faculty of Agriculture, Kyushu University. 43, 3-4, p. 461-472 12 p.

Research output: Contribution to journalArticle

Streptomyces laurentii
Streptomyces cyaneus
thiostrepton
Thiostrepton
Bacitracin
2000
3 Citations (Scopus)

A chromosomal locus encoding a phosphoserine phosphatase- and a truncated MinD-like protein affects differentiation in Streptomyces azureus ATCC14921

Nishiyama, T., Sakemi, H., Sumi, H., Tokunaga, S., Doi, K. & Ogata, S., Sep 1 2000, In : FEMS Microbiology Letters. 190, 1, p. 133-139 7 p.

Research output: Contribution to journalArticle

Thiostrepton
Streptomyces
Contagious Ecthyma
Streptomyces coelicolor
Hyphae

Characterization of a cloned chromosomal fragment affecting differentiation in Streptomyces azureus ATCC14921

Nishiyama, T., Kamachi, Y., Yokoyama, E., Doi, K. & Ogata, S., Nov 2000, In : Journal of the Faculty of Agriculture, Kyushu University. 45, 1, p. 225-236 12 p.

Research output: Contribution to journalArticle

Streptomyces azureus
Thiostrepton
Contagious Ecthyma
Streptomyces
Hyphae
20 Citations (Scopus)

Characterization of a phage resistance plasmid, plks, of silage-making lactobacillus plantarum NGRI0101

Eguchi, T., Doi, K., Nishiyama, K., Ohmomo, S. & Ogata, S., Jan 1 2000, In : Bioscience, Biotechnology and Biochemistry. 64, 4, p. 751-756 6 p.

Research output: Contribution to journalArticle

Lactobacillus plantarum
Bacteriophages
Silage
Plasmids
Genes

Effect of thermophilic bacteria on the siliceous deposition and phylogenetic analysis of the bacterial diversity in silica scale

Inagaki, F., Kawatsu, R., Motomura, Y., Doi, K., Izawa, E. & Ogata, S., Feb 1 2000, In : Journal of the Faculty of Agriculture, Kyushu University. 44, 3-4, p. 309-316 8 p.

Research output: Contribution to journalArticle

thermophilic bacteria
Silicon Dioxide
silica
Bacteria
phylogeny
2001
3 Citations (Scopus)

Disruption of the hup gene encoding a histone-like protein HSl and detection of HSl2 of Streptomyces lividans

Yokoyama, E., Doi, K., Kimura, M. & Ogata, S., Jan 1 2001, In : Research in Microbiology. 152, 8, p. 717-723 7 p.

Research output: Contribution to journalArticle

Streptomyces lividans
Histones
Genes
Proteins
Kanamycin Resistance
46 Citations (Scopus)

Isolation and characterization of enterocin SE-K4 produced by thermophilic enterococci, Enterococcus faecalis K-4

Eguchi, T., Kaminaka, K., Shima, J., Kawamoto, S., Mori, K., Choi, S. H., Doi, K., Ohmomo, S. & Ogata, S., Feb 1 2001, In : Bioscience, Biotechnology and Biochemistry. 65, 2, p. 247-253 7 p.

Research output: Contribution to journalArticle

Bacteriocins
Enterococcus faecalis
Enterococcus
Clostridium beijerinckii
Listeria
23 Citations (Scopus)

Silicified Microbial Community at Steep Cone Hot Spring, Yellowstone National Park

Inagaki, F., Motomura, Y., Doi, K., Taguchi, S., Izawa, E., Lowe, D. R. & Ogata, S., Jan 1 2001, In : Microbes and Environments. 16, 2, p. 125-130 6 p.

Research output: Contribution to journalArticle

sinter
hot springs
thermal spring
microbial communities
microbial community
12 Citations (Scopus)

Taxonomic position of new bacteriocin (nukacin ISK-1) producer isolated from long-aged Nukadoko

Ishizaki, A., Takese, E., Ikai, T., Kumai, S., Nagano, R., Sonomoto, K., Doi, K., Ogata, S., Kawamura, Y. & Ezaki, T., Jan 1 2001, In : Journal of General and Applied Microbiology. 47, 3, p. 143-147 5 p.

Research output: Contribution to journalArticle

Bacteriocins
nukacin ISK-1
2002
6 Citations (Scopus)

Isolation of enterocin SE-K4-encoding plasmid and a high enterocin SE-K4 producing strain of enterococcus faecalis K-4

Doi, K., Eguchi, T., Choi, S. H., Iwatake, A., Ohmomo, S. & Ogata, S., Jan 1 2002, In : Journal of Bioscience and Bioengineering. 93, 4, p. 434-436 3 p.

Research output: Contribution to journalArticle

Enterococcus faecalis
Plasmids
Bacteriocins
Immunity
Curing
2003
11 Citations (Scopus)

A comparative study and phage typing of silage-making Lactobacillus bacteriophages

Doi, K., Zhang, Y., Nishizaki, Y., Umeda, A., Ohmomo, S. & Ogata, S., Jan 1 2003, In : Journal of Bioscience and Bioengineering. 95, 5, p. 518-525 8 p.

Research output: Contribution to journalArticle

Bacteriophage Typing
Bacteriophages
Silage
Lactobacillus
Host Specificity
2 Citations (Scopus)

Effects of UV Dose on Formation of Spontaneously Developing Pocks in Streptomyces azureus ATCC14921

Yamada, S., Suenaga, H., Doi, K., Yoshino, S. & Ogata, S., Jan 1 2003, In : Bioscience, Biotechnology and Biochemistry. 67, 4, p. 797-802 6 p.

Research output: Contribution to journalArticle

Replicon
Streptomyces
Plasmids
Bacteriophages
Ultraviolet Rays
1 Citation (Scopus)

Nucleotide sequence of conjugative and integrating plasmid pSLS from streptomyces laurentii ATCC31255

Sakemi, H., Nishitake, S., Rodprapakorn, M., Shirakami, T., Takechi, S., Doi, K. & Ogata, S., Feb 1 2003, In : Journal of the Faculty of Agriculture, Kyushu University. 47, 2, p. 407-417 11 p.

Research output: Contribution to journalArticle

Streptomyces laurentii
Streptomyces
plasmids
Plasmids
nucleotide sequences
2006
4 Citations (Scopus)

Characterization of bacteriocin-producing lactic acid bacteria strain N1-33 isolated from edible fermented bamboo shoot

Alemu, M., Laemkom, P., Doi, K., Ohmomo, S., Yajima, M. & Nitisinprasert, S., Apr 1 2006, In : Kasetsart Journal - Natural Science. 40, 2, p. 486-498 13 p.

Research output: Contribution to journalArticle

bamboo shoots
Bacteriocins
bacteriocins
lactic acid bacteria
Lactic Acid
2008
32 Citations (Scopus)

Adsorption of SIP E. coli onto quartz and its applications in froth flotation

Farahat, M., Hirajima, T., Sasaki, K., Aiba, Y. & Doi, K., Apr 1 2008, In : Minerals Engineering. 21, 5, p. 389-395 7 p.

Research output: Contribution to journalArticle

Froth flotation
Quartz
Escherichia coli Proteins
Silicon Dioxide
Escherichia coli
4 Citations (Scopus)
Phosphoglycerate Dehydrogenase
Sulfolobus
Biosynthetic Pathways
Archaea
Serine
11 Citations (Scopus)

Thermus thermophilus TMY isolated from silica scale taken from a geothermal power plant

Fujino, Y., Kawatsu, R., Inagaki, F., Umeda, A., Yokoyama, T., Okaue, Y., Iwai, S., Ogata, S., Ohshima, T. & Doi, K., Jan 2008, In : Journal of Applied Microbiology. 104, 1, p. 70-78 9 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Thermus
Power Plants
power plants
Silicon Dioxide
2009
46 Citations (Scopus)

Adhesion of Escherichia coli onto quartz, hematite and corundum: Extended DLVO theory and flotation behavior

Farahat, M., Hirajima, T., Sasaki, K. & Doi, K., Nov 1 2009, In : Colloids and Surfaces B: Biointerfaces. 74, 1, p. 140-149 10 p.

Research output: Contribution to journalArticle

flotation
Quartz
Corundum
Aluminum Oxide
Hematite
18 Citations (Scopus)

Pediococcus lolii sp. nov., isolated from ryegrass silage

Doi, K., Nishizaki, Y., Fujino, Y., Ohshima, T., Ohmomo, S. & Ogata, S., Nov 10 2009, In : International Journal of Systematic and Evolutionary Microbiology. 59, 5, p. 1007-1010 4 p.

Research output: Contribution to journalArticle

Pediococcus
Lolium
Silage
silage
grass silage
12 Citations (Scopus)

Stimulation of expression of a silica-induced protein (Sip) in Thermus thermophilus by supersaturated silicic acid

Doi, K., Fujino, Y., Inagaki, F., Kawatsu, R., Tahara, M., Ohshima, T., Okaue, Y., Yokoyama, T., Iwai, S. & Ogata, S., Apr 1 2009, In : Applied and environmental microbiology. 75, 8, p. 2406-2413 8 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Silicic Acid
silicic acid
Silicon Dioxide
silica
10 Citations (Scopus)

Sulfolobus tokodaii ST0053 produces a novel thermostable, NAD-dependent medium-chain alcohol dehydrogenase

Yanai, H., Doi, K. & Ohshima, T., Mar 1 2009, In : Applied and environmental microbiology. 75, 6, p. 1758-1763 6 p.

Research output: Contribution to journalArticle

Sulfolobus
Alcohol Dehydrogenase
alcohol dehydrogenase
NAD
alcohol
2010

Adhesion of Escherichia coli onto oxide minerals - extended dlvo theory and Flotation behaviour

Farahat, M., Hirajima, T., Sasaki, K. & Doi, K., 2010, XXV International Mineral Processing Congress 2010, IMPC 2010. Vol. 3. p. 1841-1851 11 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Oxide minerals
Flotation
adhesion
Escherichia coli
Quartz
13 Citations (Scopus)

Silica deposition and phenotypic changes to Thermus thermophilus cultivated in the presence of supersaturated silicia

Iwai, S., Doi, K., Fujino, Y., Nakazono, T., Fukuda, K., Motomura, Y. & Ogata, S., Jun 1 2010, In : ISME Journal. 4, 6, p. 809-816 8 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Silicon Dioxide
silica
peptide antibiotics
Silicic Acid
2011
17 Citations (Scopus)

Amino acid components of lees in salmon fish sauce are tyrosine and phenylalanine

Ohmori, T., Mutaguchi, Y., Yoshikawa, S., Doi, K. & Ohshima, T., Sep 1 2011, In : Journal of Bioscience and Bioengineering. 112, 3, p. 256-258 3 p.

Research output: Contribution to journalArticle

Salmon
Phenylalanine
Fish
Tyrosine
Amino acids
12 Citations (Scopus)

Characterization of a novel dye-linked L-proline dehydrogenase from an aerobic hyperthermophilic archaeon, Pyrobaculum calidifontis

Satomura, T., Zhang, X. D., Hara, Y., Doi, K., Sakuraba, H. & Ohshima, T., Feb 1 2011, In : Applied Microbiology and Biotechnology. 89, 4, p. 1075-1082 8 p.

Research output: Contribution to journalArticle

Pyrobaculum
Proline Oxidase
Archaea
Proline
Coloring Agents
17 Citations (Scopus)
diaminopimelate dehydrogenase
Soil
Enzymes
Complex Mixtures
NADP
10 Citations (Scopus)

Visible wavelength spectrophotometric assays of l-aspartate and d-aspartate using hyperthermophilic enzyme systems

Mutaguchi, Y., Ohmori, T., Sakuraba, H., Yoneda, K., Doi, K. & Ohshima, T., Feb 1 2011, In : Analytical Biochemistry. 409, 1, p. 1-6 6 p.

Research output: Contribution to journalArticle

Aspartic Acid
Assays
Wavelength
Enzymes
aspartate racemase
2012
16 Citations (Scopus)

A psychrophilic leucine dehydrogenase from Sporosarcina psychrophila: Purification, characterization, gene sequencing and crystal structure analysis

Zhao, Y., Wakamatsu, T., Doi, K., Sakuraba, H. & Ohshima, T., Nov 1 2012, In : Journal of Molecular Catalysis B: Enzymatic. 83, p. 65-72 8 p.

Research output: Contribution to journalArticle

Sporosarcina
Leucine Dehydrogenase
Purification
Genes
Crystal structure
18 Citations (Scopus)

Creation of a thermostable NADP+-dependent d-amino acid dehydrogenase from Ureibacillus thermosphaericus strain A1 meso-diaminopimelate dehydrogenase by site-directed mutagenesis

Akita, H., Doi, K., Kawarabayasi, Y. & Ohshima, T., Jan 1 2012, In : Biotechnology letters. 34, 9, p. 1693-1699 7 p.

Research output: Contribution to journalArticle

diaminopimelate dehydrogenase
Mutagenesis
Site-Directed Mutagenesis
NADP
Amino acids
8 Citations (Scopus)

Effect of microorganisms on flocculation of quartz

Hirajima, T., Aiba, Y., Farahat, M., Okibe, N., Sasaki, K., Tsuruta, T. & Doi, K., Jan 25 2012, In : International Journal of Mineral Processing. 102-103, p. 107-111 5 p.

Research output: Contribution to journalArticle

Quartz
Flocculation
flocculation
Microorganisms
microorganism
4 Citations (Scopus)

Effects of alkali or acid treatment on the isomerization of amino acids

Ohmori, T., Mutaguchi, Y., Doi, K. & Ohshima, T., Oct 1 2012, In : Journal of Bioscience and Bioengineering. 114, 4, p. 457-459 3 p.

Research output: Contribution to journalArticle

Alkalies
Isomerization
Amino acids
Amino Acids
Acids
1 Citation (Scopus)
diaminopimelate dehydrogenase
Site-Directed Mutagenesis
NADP
Oxidoreductases
Amino Acids
2 Citations (Scopus)

Expression analysis of the spi gene in the pock-forming plasmid pSA1.1 from Streptomyces azureus and localization of its product during differentiation

Doi, K., Ohyama, Y., Yokoyama, E., Nishiyama, T., Fujino, Y., Nagayoshi, Y., Ohshima, T. & Ogata, S., Aug 1 2012, In : Applied Microbiology and Biotechnology. 95, 3, p. 707-716 10 p.

Research output: Contribution to journalArticle

Streptomyces
Hyphae
Mycelium
Plasmids
Gene Dosage