• 8436 Citations
  • 42 h-Index
1987 …2019

Research output per year

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Research Output

Article

Software updates in the illumina hiseq platform affect whole-genome bisulfite sequencing

Toh, H., Shirane, K., Miura, F., Kubo, N., Ichiyanagi, K., Hayashi, K., Saitou, M., Suyama, M., Ito, T. & Sasaki, H., Jan 5 2017, In : BMC genomics. 18, 1, 31.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Solution structure of the PX domain, a target of the SH3 domain

Hiroaki, H., Ago, T., Ito, T., Sumimoto, H. & Kohda, D., 2001, In : Nature Structural Biology. 8, 6, p. 526-530 5 p.

Research output: Contribution to journalArticle

141 Citations (Scopus)

Spatiotemporal, allelic, and enforced expression of Ximpact, the Xenopus homolog of mouse imprinted gene Impact

Yamada, Y., Hagiwara, Y., Shiokawa, K., Sakaki, Y. & Ito, T., Mar 5 1999, In : Biochemical and Biophysical Research Communications. 256, 1, p. 162-169 8 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Structure and ligand recognition of the PB1 domain: A novel protein module binding to the PC motif

Terasawa, H., Noda, Y., Ito, T., Hatanaka, H., Ichikawa, S., Ogura, K., Sumimoto, H. & Inagaki, F., Aug 1 2001, In : EMBO Journal. 20, 15, p. 3947-3956 10 p.

Research output: Contribution to journalArticle

58 Citations (Scopus)

Structure of the rat α2-macroglobulin-coding gene

Hattori, M., Kusakabe, S., Ohgusu, H., Tsuchiya, Y., Ito, T. & Sakaki, Y., Apr 30 1989, In : Gene. 77, 2, p. 333-340 8 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)
19 Citations (Scopus)

The adaptor protein p40 phox as a positive regulator of the superoxide-producing phagocyte oxidase

Kuribayashi, F., Nunoi, H., Wakamatsu, K., Tsunawaki, S., Sato, K., Ito, T. & Sumimoto, H., Dec 2 2002, In : EMBO Journal. 21, 23, p. 6312-6320 9 p.

Research output: Contribution to journalArticle

118 Citations (Scopus)

The AP-1 transcription factor JunB is required for Th17 cell differentiation

Yamazaki, S., Tanaka, Y., Araki, H., Kohda, A., Sanematsu, F., Arasaki, T., Duan, X., Miura, F., Katagiri, T., Shindo, R., Nakano, H., Ito, T., Fukui, Y., Endo, S. & Sumimoto, H., Dec 1 2017, In : Scientific reports. 7, 1, 17402.

Research output: Contribution to journalArticle

13 Citations (Scopus)

The PB1 domain and the PC motif-containing region are structurally similar protein binding modules

Yoshinaga, S., Kohjima, M., Ogura, K., Yokochi, M., Takeya, R., Ito, T., Sumimoto, H. & Inagaki, F., Oct 1 2003, In : EMBO Journal. 22, 19, p. 4888-4897 10 p.

Research output: Contribution to journalArticle

30 Citations (Scopus)

The PC motif: A novel and evolutionarily conserved sequence involved in interaction between p40(phox) and p67(phox), SH3 domain-containing cytosolic factors of the phagocyte NADPH oxidase

Nakamura, R., Sumimoto, H., Mizuki, K., Hata, K., Ago, T., Kitajima, S., Takeshige, K., Sakaki, Y. & Ito, T., Feb 1 1998, In : European Journal of Biochemistry. 251, 3, p. 583-589 7 p.

Research output: Contribution to journalArticle

70 Citations (Scopus)

The PX domain as a novel phosphoinositide-binding module

Ago, T., Takeya, R., Hiroaki, H., Kuribayashi, F., Ito, T., Kohda, D. & Sumimoto, H., Sep 28 2001, In : Biochemical and Biophysical Research Communications. 287, 3, p. 733-738 6 p.

Research output: Contribution to journalArticle

88 Citations (Scopus)

The WD40 protein Morg1 facilitates Par6-aPKC binding to Crb3 for apical identity in epithelial cells

Hayase, J., Kamakura, S., Iwakiri, Y., Yamaguchi, Y., Izaki, T., Ito, T. & Sumimoto, H., Mar 1 2013, In : Journal of Cell Biology. 200, 5, p. 635-650 16 p.

Research output: Contribution to journalArticle

23 Citations (Scopus)

The yeast eIF4E-associated protein Eap1p attenuates GCN4 translation upon TOR-inactivation

Matsuo, R., Kubota, H., Obata, T., Kito, K., Ota, K., Kitazono, T., Ibayashi, S., Sasaki, T., Iida, M. & Ito, T., Apr 25 2005, In : FEBS Letters. 579, 11, p. 2433-2438 6 p.

Research output: Contribution to journalArticle

17 Citations (Scopus)
641 Citations (Scopus)

Toward genome-wide scanning of gene expression: A functional aspect of the Genome Project

Ito, T. & Sakaki, Y., 1996, In : Essays in Biochemistry. 31, p. 11-21 11 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Transcriptional activators in yeast

Titz, B., Thomas, S., Rajagopala, S. V., Chiba, T., Ito, T. & Uetz, P., Mar 20 2006, In : Nucleic acids research. 34, 3, p. 955-967 13 p.

Research output: Contribution to journalArticle

69 Citations (Scopus)

Transcriptomic and proteomic analysis of a 14-3-3 gene-deficient yeast

Ichimura, T., Kubota, H., Goma, T., Mizushima, N., Ohsumi, Y., Iwago, M., Kakiuchi, K., Shekhar, H. U., Shinkawa, T., Taoka, M., Ito, T. & Isobe, T., May 25 2004, In : Biochemistry. 43, 20, p. 6149-6158 10 p.

Research output: Contribution to journalArticle

32 Citations (Scopus)

Translation initiation: A regulatory role for poly(A) tracts in front of the AUG codon in saccharomyces cerevisiae

Xia, X., Mackay, V., Yao, X., Wu, J., Miura, F., Ito, T. & Morris, D. R., Oct 1 2011, In : Genetics. 189, 2, p. 469-478 10 p.

Research output: Contribution to journalArticle

22 Citations (Scopus)

Triazole linking for preparation of a next-generation sequencing library from single-stranded DNA

Miura, F., Fujino, T., Kogashi, K., Shibata, Y., Miura, M., Isobe, H. & Ito, T., Sep 19 2018, In : Nucleic acids research. 46, 16, p. e95

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

Triplex affinity capture of a single copy clone from a yeast genomic library.

Ito, T., Smith, C. L. & Cantor, C. R., Jul 1992, In : Nucleic Acids Research. 20, 13, p. 3524

Research output: Contribution to journalArticle

14 Citations (Scopus)
Chapter

Methods for protein-protein interaction analysis

Kito, K. & Ito, T., Dec 1 2007, Introduction to Systems Biology. Humana Press, p. 160-182 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citation (Scopus)

Post-bisulfite adaptor tagging for PCR-free whole-genome bisulfite sequencing

Miura, F. & Ito, T., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 123-136 14 p. (Methods in Molecular Biology; vol. 1708).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)
Comment/debate

Erratum: Extraction of knowledge on protein-protein interaction by association rule discovery (Bioinformatics (2002) vol. 18 (705-714))

Oyama, T., Kitano, K., Satou, K. & Ito, T., Aug 1 2002, In : Bioinformatics. 18, 8, 1 p.

Research output: Contribution to journalComment/debate

Erratum: The adaptor protein p40phox as a positive regulator of the superoxide-producing phagocyte oxidase (EMBO Journal (2002) 21 (6312-6320) DOI 10.1093/emboj/cdf642)

Kuribayashi, F., Nunoi, H., Wakamatsu, K., Tsunawaki, S., Sato, K., Ito, T. & Sumimoto, H., Feb 1 2016, In : EMBO Journal. 35, 3, p. 369-370 2 p.

Research output: Contribution to journalComment/debate

1 Citation (Scopus)
Letter

OPR, PC and AID: All in the PB1 family

Ponting, C. P., Ito, T., Moscat, J., Diaz-Meco, M. T., Inagaki, F. & Sumimoto, H., Jan 1 2002, In : Trends in Biochemical Sciences. 27, 1, 1 p.

Research output: Contribution to journalLetter

52 Citations (Scopus)
Review article

Analysis of chromosome 21--construction of STS map and its application for contig map construction

Sakaki, Y., Hattori, M., Tanahashi, H., Ito, T. & Tashiro, K., Jan 1 1993, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 38, 3, p. 260-267 8 p.

Research output: Contribution to journalReview article

Exploring the protein interactome using comprehensive two-hybrid projects.

Ito, T., Chiba, T. & Yoshida, M., Jan 1 2001, In : Trends in biotechnology. 19, 10 Suppl

Research output: Contribution to journalReview article

62 Citations (Scopus)

Mass spectrometry-based approaches toward absolute quantitative proteomics

Kito, K. & Ito, T., Jun 1 2008, In : Current Genomics. 9, 4, p. 263-274 12 p.

Research output: Contribution to journalReview article

69 Citations (Scopus)

Mass spectrometry-based proteomics for quantitative description of cellular events

Kito, K. & Ito, T., Dec 1 2004, In : Current Genomics. 5, 8, p. 629-635 7 p.

Research output: Contribution to journalReview article

3 Citations (Scopus)

Methods for systematic scanning of gene expression

Ito, T., Jan 1 1997, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 42, 17 Suppl, p. 2981-2986 6 p.

Research output: Contribution to journalReview article

Roles for the two-hybrid system in exploration of the yeast protein interactome.

Ito, T., Ota, K., Kubota, H., Yamaguchi, Y., Chiba, T., Sakuraba, K. & Yoshida, M., Aug 2002, In : Molecular & cellular proteomics : MCP. 1, 8, p. 561-566 6 p.

Research output: Contribution to journalReview article

96 Citations (Scopus)

Screening for imprinted genes by allelic message display

Hagiwara, Y. & Ito, T., Jan 1 1997, In : Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme. 42, 17 Suppl, p. 2864-2868 5 p.

Research output: Contribution to journalReview article

98 Citations (Scopus)

Unexpected complexity of the budding yeast transcriptome

Ito, T., Miura, F. & Onda, M., Dec 1 2008, In : IUBMB Life. 60, 12, p. 775-781 7 p.

Research output: Contribution to journalReview article

5 Citations (Scopus)