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Research Output 2008 2017

  • 103 Citations
  • 6 h-Index
  • 17 Article
  • 1 Chapter
2017

Complete genome sequence of Thermus thermophilus TMY, isolated from a geothermal power plant

Fujino, Y., Nagayoshi, Y., Ohshima, T., Ogata, S. & Doi, K., Jan 1 2017, In : Genome Announcements. 5, 5, e01596-16.

Research output: Contribution to journalArticle

Thermus thermophilus
Power Plants
Genome
Silicon Dioxide
Genes
2016

A tightly regulated expression system for E. coli using supersaturated silicic acid

Fujino, Y., Tanoue, R., Yokoyama, T. & Doi, K., Aug 1 2016, In : Biotechnology letters. 38, 8, p. 1381-1387 7 p.

Research output: Contribution to journalArticle

Silicic Acid
Escherichia coli
Acids
Silicon Dioxide
Genes
1 Citation (Scopus)

Complete genome sequence of thiostrepton-producing Streptomyces laurentii ATCC 31255D

Doi, K., Fujino, Y., Nagayoshi, Y., Ohshima, T. & Ogata, S., Jan 1 2016, In : Genome Announcements. 4, 3, e00360-16.

Research output: Contribution to journalArticle

Thiostrepton
Base Composition
Streptomyces
Genome
Anti-Bacterial Agents
6 Citations (Scopus)

Physiological properties and genome structure of the hyperthermophilic filamentous phage φOH3 which infects Thermus thermophilus HB8

Nagayoshi, Y., Kumagae, K., Mori, K., Tashiro, K., Nakamura, A., Fujino, Y., Hiromasa, Y., Iwamoto, T., Kuhara, S., Ohshima, T. & Doi, K., Feb 23 2016, In : Frontiers in Microbiology. 7, FEB, 50.

Research output: Contribution to journalArticle

Thermus thermophilus
Bacteriophages
Genome
Open Reading Frames
Thermus
2 Citations (Scopus)

Silica-induced protein (Sip) in thermophilic bacterium Thermus thermophilus responds to low iron availability

Fujino, Y., Nagayoshi, Y., Iwase, M., Yokoyama, T., Ohshima, T. & Doi, K., Jun 1 2016, In : Applied and Environmental Microbiology. 82, 11, p. 3198-3207 10 p.

Research output: Contribution to journalArticle

Thermus thermophilus
thermophilic bacterium
thermophilic bacteria
Silicon Dioxide
silica
2015
1 Citation (Scopus)

Draft genome sequence of thiostrepton-producing Streptomyces azureus ATCC 14921

Sakihara, K., Maeda, J., Tashiro, K., Fujino, Y., Kuhara, S., Ohshima, T., Ogata, S. & Doi, K., Jan 1 2015, In : Genome Announcements. 3, 5, e01183-15.

Research output: Contribution to journalArticle

Thiostrepton
Streptomyces
Genome
Base Composition
2013

Biomineralization in geothermal environments

Doi, K. & Fujino, Y., Jan 1 2013, Thermophilic Microbes in Environmental and Industrial Biotechnology: Biotechnology of Thermophiles. Springer Netherlands, p. 233-247 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Silicon Dioxide
Thermus
Bacteria
Geological Phenomena
Inorganic Chemicals
1 Citation (Scopus)

Draft genome sequence of D-branched-chain amino acid producer Lactobacillus otakiensis JCM 15040T, isolated from a traditional Japanese pickle

Doi, K., Mori, K., Mutaguchi, Y., Tashiro, K., Fujino, Y., Ohmori, T., Kuhara, S. & Ohshima, T., Jan 1 2013, In : Genome Announcements. 1, 4, e00546-13.

Research output: Contribution to journalArticle

Branched Chain Amino Acids
Base Composition
Lactobacillus
Genome
9 Citations (Scopus)

Draft genome sequence of Geobacillus kaustophilus GBlys, a lysogenic strain with bacteriophage φOH2

Doi, K., Mori, K., Martono, H., Nagayoshi, Y., Fujino, Y., Tashiro, K., Kuhara, S. & Ohshima, T., Jan 1 2013, In : Genome Announcements. 1, 4, e00634-13.

Research output: Contribution to journalArticle

Geobacillus
Base Composition
Bacteriophages
Genome
3 Citations (Scopus)

Draft genome sequence of Pediococcus lolii NGRI 0510QT isolated from ryegrass silage

Doi, K., Mori, K., Tashiro, K., Fujino, Y., Nagayoshi, Y., Hayashi, Y., Kuhara, S. & Ohshima, T., Jan 1 2013, In : Genome Announcements. 1, 1, e00156-12.

Research output: Contribution to journalArticle

Pediococcus
Lolium
Silage
Base Composition
Islands
6 Citations (Scopus)

Identification of thermo tolerant lactic acid bacteria isolated from silage prepared in the hot and humid climate of Southwestern Japan

Doi, K., Nishizaki, Y., Kimura, H., Kitahara, M., Fujino, Y., Ohmomo, S., Ohshima, T. & Ogata, S., Nov 14 2013, In : SpringerPlus. 2, 1, p. 1-12 12 p.

Research output: Contribution to journalArticle

Silage
Climate
Random Amplified Polymorphic DNA Technique
Lactic Acid
Japan
2012
2 Citations (Scopus)

Expression analysis of the spi gene in the pock-forming plasmid pSA1.1 from Streptomyces azureus and localization of its product during differentiation

Doi, K., Ohyama, Y., Yokoyama, E., Nishiyama, T., Fujino, Y., Nagayoshi, Y., Ohshima, T. & Ogata, S., Aug 1 2012, In : Applied Microbiology and Biotechnology. 95, 3, p. 707-716 10 p.

Research output: Contribution to journalArticle

Streptomyces
Hyphae
Mycelium
Plasmids
Gene Dosage
5 Citations (Scopus)

Silica deposition induced by isolated aluminum ions bound on chelate resin as a model compound of the surface of microbes

Bai, S., Naren, G., Noma, H., Etou, M., Ohashi, H., Fujino, Y., Doi, K., Okaue, Y. & Yokoyama, T., Jun 15 2012, In : Colloids and Surfaces B: Biointerfaces. 95, p. 208-213 6 p.

Research output: Contribution to journalArticle

microorganisms
Aluminum
chelates
Silicon Dioxide
Silicic Acid
2011
15 Citations (Scopus)
diaminopimelate dehydrogenase
Soil
Enzymes
Complex Mixtures
NADP
2010
13 Citations (Scopus)

Silica deposition and phenotypic changes to Thermus thermophilus cultivated in the presence of supersaturated silicia

Iwai, S., Doi, K., Fujino, Y., Nakazono, T., Fukuda, K., Motomura, Y. & Ogata, S., Jun 1 2010, In : ISME Journal. 4, 6, p. 809-816 8 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Silicon Dioxide
silica
peptide antibiotics
Silicic Acid
2009
16 Citations (Scopus)

Pediococcus lolii sp. nov., isolated from ryegrass silage

Doi, K., Nishizaki, Y., Fujino, Y., Ohshima, T., Ohmomo, S. & Ogata, S., Nov 10 2009, In : International Journal of Systematic and Evolutionary Microbiology. 59, 5, p. 1007-1010 4 p.

Research output: Contribution to journalArticle

Pediococcus
Lolium
Silage
silage
grass silage
12 Citations (Scopus)

Stimulation of expression of a silica-induced protein (Sip) in Thermus thermophilus by supersaturated silicic acid

Doi, K., Fujino, Y., Inagaki, F., Kawatsu, R., Tahara, M., Ohshima, T., Okaue, Y., Yokoyama, T., Iwai, S. & Ogata, S., Apr 2009, In : Applied and Environmental Microbiology. 75, 8, p. 2406-2413 8 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Silicic Acid
silicic acid
Silicon Dioxide
silica
2008
11 Citations (Scopus)

Thermus thermophilus TMY isolated from silica scale taken from a geothermal power plant

Fujino, Y., Kawatsu, R., Inagaki, F., Umeda, A., Yokoyama, T., Okaue, Y., Iwai, S., Ogata, S., Ohshima, T. & Doi, K., Jan 2008, In : Journal of Applied Microbiology. 104, 1, p. 70-78 9 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Thermus
Power Plants
power plants
Silicon Dioxide