A proposed common structure of substrates bound to mitochondrial processing peptidase

K. Kojima, S. Kitada, Tadashi Ogishima, A. Ito

Research output: Contribution to journalArticle

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Abstract

Mitochondrial processing peptidase (MPP), a metalloendopeptidase consisting of α- and β-subunits, specifically cleaves off the N-terminal presequence of the mitochondrial protein precursor. Structural information of the substrate bound to MPP was obtained using fluorescence resonance energy transfer (FRET) measurement. A series of the peptide substrates, which have distal arginine residues required for effective cleavage at positions -7, -10, -14, and -17 from the cleavage site, were synthesized and covalently labeled with 7-diethyl aminocoumarin-3-carboxylic acid at the N termini and N,N′-dimethyl-N-(iodoacetyl)-N′-(7-nitrobenz-2-oxa-1,3-diazol-4-y l)ethylenediamine (IANBD) at position +4, as fluorescent donor and acceptor, respectively. When the peptides were bound to MPP, substantially the same distances were obtained between the two probes, irrespective of the length of the intervening sequence between the two probes. When 7-diethylamino-3-(4′maleimidyl phenyl)-4-methyl coumarin was introduced into a single cysteine residue in β-MPP as a donor and IANBD was coupled either at the N terminus or the +4 position of the peptide substrate as an acceptor, intermolecular FRET measurements also demonstrated that distances of the donor-acceptor pair were essentially the same among the peptides with different lengths of intervening sequences. The results indicate that the N-terminal portion and the portion around the cleavage site of the presequence interact with specific sites in the MPP molecule, irrespective of the length of the intervening sequence between the two portions, suggesting the structure of the intervening sequence is flexible when bound to the MPP.

Original languageEnglish
Pages (from-to)2115-2121
Number of pages7
JournalJournal of Biological Chemistry
Volume276
Issue number3
DOIs
Publication statusPublished - Jan 19 2001

Fingerprint

Introns
Substrates
Fluorescence Resonance Energy Transfer
Peptides
ethylenediamine
Aminocoumarins
Metalloendopeptidases
Protein Precursors
Mitochondrial Proteins
Carboxylic Acids
Cysteine
Arginine
mitochondrial processing peptidase
Molecules
4-(N-(iodoacetoxy)ethyl-N-methyl)amino-7-nitrobenz-2-oxa-1,3-diazole

All Science Journal Classification (ASJC) codes

  • Biochemistry
  • Molecular Biology
  • Cell Biology

Cite this

A proposed common structure of substrates bound to mitochondrial processing peptidase. / Kojima, K.; Kitada, S.; Ogishima, Tadashi; Ito, A.

In: Journal of Biological Chemistry, Vol. 276, No. 3, 19.01.2001, p. 2115-2121.

Research output: Contribution to journalArticle

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