An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors

Kohji Okamura, Yoichi Yamada, Yoshiyuki Sakaki, Takashi Ito

Research output: Contribution to journalArticle

9 Citations (Scopus)

Abstract

Mouse Impact is the sole imprinted gene mapped to chromosome 18 to date. Despite its remarkable evolutionary conservation, human IMPACT was shown to escape genomic imprinting. Here we identified Hrh4 and Osbpl1 as the distal and proximal nearest neighbors of Impact, respectively, and found that both genes are expressed biallelically. Thus, in contrast with most imprinted genes, Impact fails to show apparent physical clustering with other imprinted genes. Since Impact not only lies in an intergenic region but also consists of 11 exons, it does not seem to be an imprinted gene generated by a retrotransposition. Hazardous effects of overexpressed Impact, a genomic segment containing paralogues of Hrh4 and Osbpl1 but not of Impact, and enhanced promoter activity in the mouse led us to propose an alternative model. This model assumes that segmental duplication followed by enhancement of the promoter activity in the lineage to mouse is responsible for the species-specific imprinting of Impact.

Original languageEnglish
Pages (from-to)381-390
Number of pages10
JournalDNA Research
Volume11
Issue number6
DOIs
Publication statusPublished - Dec 1 2004
Externally publishedYes

Fingerprint

Genomic Imprinting
Genes
Genomic Segmental Duplications
Chromosomes, Human, Pair 18
Intergenic DNA
Cluster Analysis
Exons

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Genetics

Cite this

An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors. / Okamura, Kohji; Yamada, Yoichi; Sakaki, Yoshiyuki; Ito, Takashi.

In: DNA Research, Vol. 11, No. 6, 01.12.2004, p. 381-390.

Research output: Contribution to journalArticle

Okamura, Kohji ; Yamada, Yoichi ; Sakaki, Yoshiyuki ; Ito, Takashi. / An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors. In: DNA Research. 2004 ; Vol. 11, No. 6. pp. 381-390.
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