TY - JOUR
T1 - Coarse-grained molecular dynamics simulation of binary charged lipid membranes
T2 - Phase separation and morphological dynamics
AU - Ito, Hiroaki
AU - Higuchi, Yuji
AU - Shimokawa, Naofumi
N1 - Funding Information:
Most of the calculations were performed using the parallel computer SGI UV3000 provided by Research Center for Advanced Computing Infrastructure at JAIST. H.I. acknowledges support from Grants-in-Aid for the Japan Society for the Promotion of Science (JSPS) Research Fellowship for Young Scientists (JP13J01297) and Sasakawa Scientific Research Grant from The Japan Science Society (28-233). N.S. acknowledges support from a Grant-in-Aid for Scientific Reserch on Innovative Areas Molecular Robotics (JP15H00806) from the Ministry of Education, Culture, Sports, Science, and Technology of Japan (MEXT) and a Grant-in-Aid for Young Scientist (B) (JP26800222) from JSPS.
Publisher Copyright:
© 2016 American Physical Society.
PY - 2016/10/26
Y1 - 2016/10/26
N2 - Biomembranes, which are mainly composed of neutral and charged lipids, exhibit a large variety of functional structures and dynamics. Here, we report a coarse-grained molecular dynamics (MD) simulation of the phase separation and morphological dynamics in charged lipid bilayer vesicles. The screened long-range electrostatic repulsion among charged head groups delays or inhibits the lateral phase separation in charged vesicles compared with neutral vesicles, suggesting the transition of the phase-separation mechanism from spinodal decomposition to nucleation or homogeneous dispersion. Moreover, the electrostatic repulsion causes morphological changes, such as pore formation, and further transformations into disk, string, and bicelle structures, which are spatiotemporally coupled to the lateral segregation of charged lipids. Based on our coarse-grained MD simulation, we propose a plausible mechanism of pore formation at the molecular level. The pore formation in a charged-lipid-rich domain is initiated by the prior disturbance of the local molecular orientation in the domain.
AB - Biomembranes, which are mainly composed of neutral and charged lipids, exhibit a large variety of functional structures and dynamics. Here, we report a coarse-grained molecular dynamics (MD) simulation of the phase separation and morphological dynamics in charged lipid bilayer vesicles. The screened long-range electrostatic repulsion among charged head groups delays or inhibits the lateral phase separation in charged vesicles compared with neutral vesicles, suggesting the transition of the phase-separation mechanism from spinodal decomposition to nucleation or homogeneous dispersion. Moreover, the electrostatic repulsion causes morphological changes, such as pore formation, and further transformations into disk, string, and bicelle structures, which are spatiotemporally coupled to the lateral segregation of charged lipids. Based on our coarse-grained MD simulation, we propose a plausible mechanism of pore formation at the molecular level. The pore formation in a charged-lipid-rich domain is initiated by the prior disturbance of the local molecular orientation in the domain.
UR - http://www.scopus.com/inward/record.url?scp=84993927591&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84993927591&partnerID=8YFLogxK
U2 - 10.1103/PhysRevE.94.042611
DO - 10.1103/PhysRevE.94.042611
M3 - Article
C2 - 27841477
AN - SCOPUS:84993927591
VL - 94
JO - Physical Review E
JF - Physical Review E
SN - 2470-0045
IS - 4
M1 - 042611
ER -