Darwinian evolution of Trimeresurus flavoviridis venom gland phospholipase A2 isozymes

Kinichi Nakashima, Tomohisa Ogawa, Naoko Oda, Yasuyuki Shimohigashi, Masahira Hattorit, Yoshiyuki Sakakit, Hiroshi Kihara, Motonori Ohno

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

As a step toward understanding the structure and function relationships of phospholipases A2 (PLA2s), we isolated and sequenced five cDNAs encoding Trimeresurus flavoviridis (Habu snake) venom PLA2 isozymes. Comparison of the nucleotide sequences of these cDNAs revealed that the homologies of the 5′ and 3′ untranslated regions were much higher than that of the protein-coding regions and that the base substitution rates at the first, second, and third position of codons are similar in the coding region. To gain further insight into this novel findings, six T. flavoviridis venom gland PLA2 isozyme genes were isolated and sequenced. They were found to consist of four exons and three introns. The numbers of nucleotide substitutions per site (KN) for introns are approximately one-fourth of the numbers of nucleotide substituions per synonymous site (KS) for the protein-coding regions, indicating that the introns are unusually conserved. The fact that the numbers of nucleotide substitutions per nonsynonymous site (KA) are close to or larger than KS values for relevant pairs of genes revealed that Darwinian-type accelerated substitutions have occurred in the protein-coding regions of exons. This is compatible with the presence of PLA2 species with diverse physiological activities in the venom.

Original languageEnglish
Pages (from-to)715-720
Number of pages6
JournalPure and Applied Chemistry
Volume66
Issue number4
DOIs
Publication statusPublished - Jan 1 1994

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Phospholipases A2
Venoms
Nucleotides
Isoenzymes
Substitution reactions
Introns
Proteins
Exons
Complementary DNA
Genes
Snake Venoms
5' Untranslated Regions
3' Untranslated Regions

All Science Journal Classification (ASJC) codes

  • Chemistry(all)
  • Chemical Engineering(all)

Cite this

Darwinian evolution of Trimeresurus flavoviridis venom gland phospholipase A2 isozymes. / Nakashima, Kinichi; Ogawa, Tomohisa; Oda, Naoko; Shimohigashi, Yasuyuki; Hattorit, Masahira; Sakakit, Yoshiyuki; Kihara, Hiroshi; Ohno, Motonori.

In: Pure and Applied Chemistry, Vol. 66, No. 4, 01.01.1994, p. 715-720.

Research output: Contribution to journalArticle

Nakashima, K, Ogawa, T, Oda, N, Shimohigashi, Y, Hattorit, M, Sakakit, Y, Kihara, H & Ohno, M 1994, 'Darwinian evolution of Trimeresurus flavoviridis venom gland phospholipase A2 isozymes', Pure and Applied Chemistry, vol. 66, no. 4, pp. 715-720. https://doi.org/10.1351/pac199466040715
Nakashima, Kinichi ; Ogawa, Tomohisa ; Oda, Naoko ; Shimohigashi, Yasuyuki ; Hattorit, Masahira ; Sakakit, Yoshiyuki ; Kihara, Hiroshi ; Ohno, Motonori. / Darwinian evolution of Trimeresurus flavoviridis venom gland phospholipase A2 isozymes. In: Pure and Applied Chemistry. 1994 ; Vol. 66, No. 4. pp. 715-720.
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