Abstract
The mechanism of Parkinson's disease can be investigated at the molecular level by using radio-tracers. The concentration of dopamine in the brain can be observed by using a radio-tracer, 6-[18F]fluorodopa (FDOPA), with positron emission tomography (PET), and the dopamine kinetics can be described as compartmental models for tissues of the brain. The models for FDOPA kinetics are solved explicitly, but the solution shows a complicated form including several convolutions over time domain. Owing to the complicated form of the solution, graphical analyses such as Logan or Patlak analysis have been utilized as conventional methods over past decades. Because some kinetic constants for Parkinson's disease are estimated in the graphical analyses with the slope or intercept of the line obtained under various assumptions, only a limited set of parameters have approximately been estimated. We have analysed the compartmental models by using the Laplace transformation of differential equations and by algebraic computation with the aid of Gröbner base constructions. We have obtained a rigorous solution with respect to the kinetic constants over the Laplace domain. Here, we first derive a rigorous solution for the parameters, together with a discussion about the merits of the derivation. Next, we describe a procedure to determine the kinetic constants with the observed time-radioactivity curves. Last, we discuss the feasibility of our method, especially as a criterion for diagnosing Parkinson's disease.
| Original language | English |
|---|---|
| Title of host publication | Algebraic Biology - Second International Conference, AB 2007, Proceedings |
| Pages | 110-124 |
| Number of pages | 15 |
| Publication status | Published - Dec 1 2007 |
| Event | 2nd International Conference on Algebraic Biology, AB 2007 - Castle of Hagenberg, Austria Duration: Jul 2 2007 → Jul 4 2007 |
Publication series
| Name | Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) |
|---|---|
| Volume | 4545 LNCS |
| ISSN (Print) | 0302-9743 |
| ISSN (Electronic) | 1611-3349 |
Other
| Other | 2nd International Conference on Algebraic Biology, AB 2007 |
|---|---|
| Country | Austria |
| City | Castle of Hagenberg |
| Period | 7/2/07 → 7/4/07 |
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All Science Journal Classification (ASJC) codes
- Theoretical Computer Science
- Computer Science(all)
Cite this
Exact parameter determination for Parkinson's disease diagnosis with PET using an algebraic approach. / Yoshida, Hiroshi; Nakagawa, Koji; Anai, Hirokazu; Horimoto, Katsuhisa.
Algebraic Biology - Second International Conference, AB 2007, Proceedings. 2007. p. 110-124 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 4545 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
}
TY - GEN
T1 - Exact parameter determination for Parkinson's disease diagnosis with PET using an algebraic approach
AU - Yoshida, Hiroshi
AU - Nakagawa, Koji
AU - Anai, Hirokazu
AU - Horimoto, Katsuhisa
PY - 2007/12/1
Y1 - 2007/12/1
N2 - The mechanism of Parkinson's disease can be investigated at the molecular level by using radio-tracers. The concentration of dopamine in the brain can be observed by using a radio-tracer, 6-[18F]fluorodopa (FDOPA), with positron emission tomography (PET), and the dopamine kinetics can be described as compartmental models for tissues of the brain. The models for FDOPA kinetics are solved explicitly, but the solution shows a complicated form including several convolutions over time domain. Owing to the complicated form of the solution, graphical analyses such as Logan or Patlak analysis have been utilized as conventional methods over past decades. Because some kinetic constants for Parkinson's disease are estimated in the graphical analyses with the slope or intercept of the line obtained under various assumptions, only a limited set of parameters have approximately been estimated. We have analysed the compartmental models by using the Laplace transformation of differential equations and by algebraic computation with the aid of Gröbner base constructions. We have obtained a rigorous solution with respect to the kinetic constants over the Laplace domain. Here, we first derive a rigorous solution for the parameters, together with a discussion about the merits of the derivation. Next, we describe a procedure to determine the kinetic constants with the observed time-radioactivity curves. Last, we discuss the feasibility of our method, especially as a criterion for diagnosing Parkinson's disease.
AB - The mechanism of Parkinson's disease can be investigated at the molecular level by using radio-tracers. The concentration of dopamine in the brain can be observed by using a radio-tracer, 6-[18F]fluorodopa (FDOPA), with positron emission tomography (PET), and the dopamine kinetics can be described as compartmental models for tissues of the brain. The models for FDOPA kinetics are solved explicitly, but the solution shows a complicated form including several convolutions over time domain. Owing to the complicated form of the solution, graphical analyses such as Logan or Patlak analysis have been utilized as conventional methods over past decades. Because some kinetic constants for Parkinson's disease are estimated in the graphical analyses with the slope or intercept of the line obtained under various assumptions, only a limited set of parameters have approximately been estimated. We have analysed the compartmental models by using the Laplace transformation of differential equations and by algebraic computation with the aid of Gröbner base constructions. We have obtained a rigorous solution with respect to the kinetic constants over the Laplace domain. Here, we first derive a rigorous solution for the parameters, together with a discussion about the merits of the derivation. Next, we describe a procedure to determine the kinetic constants with the observed time-radioactivity curves. Last, we discuss the feasibility of our method, especially as a criterion for diagnosing Parkinson's disease.
UR - http://www.scopus.com/inward/record.url?scp=38149119014&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=38149119014&partnerID=8YFLogxK
M3 - Conference contribution
AN - SCOPUS:38149119014
SN - 9783540734321
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 110
EP - 124
BT - Algebraic Biology - Second International Conference, AB 2007, Proceedings
ER -