Highly conserved linkage homology between birds and turtles

Bird and turtle chromosomes are precise counterparts of each other

Yoichi Matsuda, Chizuko Nishida-Umehara, Hiroshi Tarui, Asato Kuroiwa, Kazuhiko Yamada, Taku Isobe, Junko Ando, Atushi Fujiwara, Yukako Hirao, Osamu Nishimura, Junko Ishijima, Akiko Hayashi, Toshiyuki Saito, Takahiro Murakami, Yasunori Murakami, Shigeru Kuratani, Kiyokazu Agata

Research output: Contribution to journalArticle

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Abstract

The karyotypes of birds, turtles and snakes are characterized by two distinct chromosomal components, macrochromosomes and microchromosomes. This close karyological relationship between birds and reptiles has long been a topic of speculation among cytogeneticists and evolutionary biologists; however, there is scarcely any evidence for orthology at the molecular level. To define the conserved chromosome synteny among humans, chickens and reptiles and the process of genome evolution in the amniotes, we constructed comparative cytogenetic maps of the Chinese soft-shelled turtle (Pelodiscus sinensis) and the Japanese four-striped rat snake (Elaphe quadrivirgata) using cDNA clones of reptile functional genes. Homology between the turtle and chicken chromosomes is highly conserved, with the six largest chromosomes being almost equivalent to each other. On the other hand, homology to chicken chromosomes is lower in the snake than in the turtle. Turtle chromosome 6q and snake chromosome 2p represent conserved synteny with the chicken Z chromosome. These results suggest that the avian and turtle genomes have been well conserved during the evolution of the Arcosauria. The avian and snake sex Z chromosomes were derived from different autosomes in a common ancestor, indicating that the causative genes of sex determination may be different between birds and snakes.

Original languageEnglish
Pages (from-to)601-615
Number of pages15
JournalChromosome Research
Volume13
Issue number6
DOIs
Publication statusPublished - Aug 1 2005

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Turtles
Snakes
Birds
Chromosomes
Reptiles
Chickens
Synteny
Genome
Sex Chromosomes
Karyotype
Cytogenetics
Genes
Complementary DNA
Clone Cells

All Science Journal Classification (ASJC) codes

  • Genetics

Cite this

Highly conserved linkage homology between birds and turtles : Bird and turtle chromosomes are precise counterparts of each other. / Matsuda, Yoichi; Nishida-Umehara, Chizuko; Tarui, Hiroshi; Kuroiwa, Asato; Yamada, Kazuhiko; Isobe, Taku; Ando, Junko; Fujiwara, Atushi; Hirao, Yukako; Nishimura, Osamu; Ishijima, Junko; Hayashi, Akiko; Saito, Toshiyuki; Murakami, Takahiro; Murakami, Yasunori; Kuratani, Shigeru; Agata, Kiyokazu.

In: Chromosome Research, Vol. 13, No. 6, 01.08.2005, p. 601-615.

Research output: Contribution to journalArticle

Matsuda, Y, Nishida-Umehara, C, Tarui, H, Kuroiwa, A, Yamada, K, Isobe, T, Ando, J, Fujiwara, A, Hirao, Y, Nishimura, O, Ishijima, J, Hayashi, A, Saito, T, Murakami, T, Murakami, Y, Kuratani, S & Agata, K 2005, 'Highly conserved linkage homology between birds and turtles: Bird and turtle chromosomes are precise counterparts of each other', Chromosome Research, vol. 13, no. 6, pp. 601-615. https://doi.org/10.1007/s10577-005-0986-5
Matsuda, Yoichi ; Nishida-Umehara, Chizuko ; Tarui, Hiroshi ; Kuroiwa, Asato ; Yamada, Kazuhiko ; Isobe, Taku ; Ando, Junko ; Fujiwara, Atushi ; Hirao, Yukako ; Nishimura, Osamu ; Ishijima, Junko ; Hayashi, Akiko ; Saito, Toshiyuki ; Murakami, Takahiro ; Murakami, Yasunori ; Kuratani, Shigeru ; Agata, Kiyokazu. / Highly conserved linkage homology between birds and turtles : Bird and turtle chromosomes are precise counterparts of each other. In: Chromosome Research. 2005 ; Vol. 13, No. 6. pp. 601-615.
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