TY - GEN
T1 - Implementation and Evaluation of Resource Allocation for a Genomic Application Program on the Grid
AU - Koita, Takahiro
AU - Kofune, Yasuyo
AU - Inoue, Yusuke
AU - Fukuda, Akira
PY - 2003/12/1
Y1 - 2003/12/1
N2 - (1)Using GlobusToolkit, several functions which can allow a genomic application program(InterProScan) to execute on the Grid are implemented, and (2)three types of resource allocation schemes are evaluated on the Grid. This paper discusses the implementation details of those functions and compares the execution time of those schemes. Our results show that the execution time of the resource allocation scheme, which uses the information of the application program and the computer power, is smaller than other schemes, and its fluctuation band is quite small.
AB - (1)Using GlobusToolkit, several functions which can allow a genomic application program(InterProScan) to execute on the Grid are implemented, and (2)three types of resource allocation schemes are evaluated on the Grid. This paper discusses the implementation details of those functions and compares the execution time of those schemes. Our results show that the execution time of the resource allocation scheme, which uses the information of the application program and the computer power, is smaller than other schemes, and its fluctuation band is quite small.
UR - http://www.scopus.com/inward/record.url?scp=1442326833&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=1442326833&partnerID=8YFLogxK
M3 - Conference contribution
AN - SCOPUS:1442326833
SN - 0889863415
T3 - IASTED International Multi-Conference on Applied Informatics
SP - 524
EP - 528
BT - 21st IASTED International Multi-Conference on Applied Informatics
T2 - 21st IASTED International Multi-Conference on Applied Informatics
Y2 - 10 February 2003 through 13 February 2003
ER -