Implementation and Evaluation of Resource Allocation for a Genomic Application Program on the Grid

Takahiro Koita, Yasuyo Kofune, Yusuke Inoue, Akira Fukuda

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Abstract

(1)Using GlobusToolkit, several functions which can allow a genomic application program(InterProScan) to execute on the Grid are implemented, and (2)three types of resource allocation schemes are evaluated on the Grid. This paper discusses the implementation details of those functions and compares the execution time of those schemes. Our results show that the execution time of the resource allocation scheme, which uses the information of the application program and the computer power, is smaller than other schemes, and its fluctuation band is quite small.

Original languageEnglish
Title of host publication21st IASTED International Multi-Conference on Applied Informatics
Pages524-528
Number of pages5
Publication statusPublished - Dec 1 2003
Event21st IASTED International Multi-Conference on Applied Informatics - Innsbruck, Austria
Duration: Feb 10 2003Feb 13 2003

Publication series

NameIASTED International Multi-Conference on Applied Informatics
Volume21

Other

Other21st IASTED International Multi-Conference on Applied Informatics
CountryAustria
CityInnsbruck
Period2/10/032/13/03

All Science Journal Classification (ASJC) codes

  • Computer Science(all)

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  • Cite this

    Koita, T., Kofune, Y., Inoue, Y., & Fukuda, A. (2003). Implementation and Evaluation of Resource Allocation for a Genomic Application Program on the Grid. In 21st IASTED International Multi-Conference on Applied Informatics (pp. 524-528). (IASTED International Multi-Conference on Applied Informatics; Vol. 21).