TY - GEN
T1 - Indexing the bijective BWT
AU - Bannai, Hideo
AU - Kärkkäinen, Juha
AU - Köppl, Dominik
AU - Piątkowski, Marcin
N1 - Funding Information:
Funding This research received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 690941. Dominik Köppl: JSPS KAKENHI Grant Number JP18F18120.
Funding Information:
This research received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 690941. Dominik Köppl: JSPS KAKENHI Grant Number JP18F18120.
Publisher Copyright:
© Hideo Bannai, Juha Kärkkäinen, Dominik Köppl, and Marcin Pi¸ atkowski.
PY - 2019/6/1
Y1 - 2019/6/1
N2 - The Burrows-Wheeler transform (BWT) is a permutation whose applications are prevalent in data compression and text indexing. The bijective BWT is a bijective variant of it that has not yet been studied for text indexing applications. We fill this gap by proposing a self-index built on the bijective BWT. The self-index applies the backward search technique of the FM-index to find a pattern P with O(|P|lg |P|) backward search steps.
AB - The Burrows-Wheeler transform (BWT) is a permutation whose applications are prevalent in data compression and text indexing. The bijective BWT is a bijective variant of it that has not yet been studied for text indexing applications. We fill this gap by proposing a self-index built on the bijective BWT. The self-index applies the backward search technique of the FM-index to find a pattern P with O(|P|lg |P|) backward search steps.
UR - http://www.scopus.com/inward/record.url?scp=85068044348&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85068044348&partnerID=8YFLogxK
U2 - 10.4230/LIPIcs.CPM.2019.17
DO - 10.4230/LIPIcs.CPM.2019.17
M3 - Conference contribution
AN - SCOPUS:85068044348
T3 - Leibniz International Proceedings in Informatics, LIPIcs
BT - 30th Annual Symposium on Combinatorial Pattern Matching, CPM 2019
A2 - Pisanti, Nadia
A2 - Pissis, Solon P.
PB - Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing
T2 - 30th Annual Symposium on Combinatorial Pattern Matching, CPM 2019
Y2 - 18 June 2019 through 20 June 2019
ER -