Integrated view of the human chromosome x-centric proteome project

Tadashi Yamamoto, Keiichi Nakayama, Hisashi Hirano, Takeshi Tomonaga, Yasushi Ishihama, Tetsushi Yamada, Tadashi Kondo, Yoshio Kodera, Yuichi Sato, Norie Araki, Hiroshi Mamitsuka, Naoki Goshima

Research output: Contribution to journalReview article

3 Citations (Scopus)

Abstract

This article introduces how the human chromosome Xcentric proteome project is carried out by the Japan Chromosome X Project Consortium. The inactivation of one of two chromosomes in female mammals and accumulation of genes related to neural/immune systems/tumor/testis are characteristic of chromosome X. In this Chromosome X Project, information on proteins translated from genes on chromosome X is collected by both mass spectrometry-and antibody-based proteomics. Information on the following resources is also provided: antibodies to proteins translated and full-length cDNAs transcripted from the chromosome X genes for recombinant proteins. The consortium aims to provide the following tools to search useful antibodies in the literature (Antibody Ranker), to find gene expression sites in microarray databases (Transcript Localizer) and to do advanced MRM analysis (information-based MRM).

Original languageEnglish
Pages (from-to)58-61
Number of pages4
JournalJournal of Proteome Research
Volume12
Issue number1
DOIs
Publication statusPublished - Jan 4 2013

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Human Chromosomes
X Chromosome
Proteome
Chromosomes
Antibodies
Genes
X-Linked Genes
Proteins
Recombinant Proteins
Proteomics
Testis
Mammals
Immune System
Mass Spectrometry
Japan
Complementary DNA
Information analysis
Databases
Gene Expression
Immune system

All Science Journal Classification (ASJC) codes

  • Biochemistry
  • Chemistry(all)

Cite this

Yamamoto, T., Nakayama, K., Hirano, H., Tomonaga, T., Ishihama, Y., Yamada, T., ... Goshima, N. (2013). Integrated view of the human chromosome x-centric proteome project. Journal of Proteome Research, 12(1), 58-61. https://doi.org/10.1021/pr300844p

Integrated view of the human chromosome x-centric proteome project. / Yamamoto, Tadashi; Nakayama, Keiichi; Hirano, Hisashi; Tomonaga, Takeshi; Ishihama, Yasushi; Yamada, Tetsushi; Kondo, Tadashi; Kodera, Yoshio; Sato, Yuichi; Araki, Norie; Mamitsuka, Hiroshi; Goshima, Naoki.

In: Journal of Proteome Research, Vol. 12, No. 1, 04.01.2013, p. 58-61.

Research output: Contribution to journalReview article

Yamamoto, T, Nakayama, K, Hirano, H, Tomonaga, T, Ishihama, Y, Yamada, T, Kondo, T, Kodera, Y, Sato, Y, Araki, N, Mamitsuka, H & Goshima, N 2013, 'Integrated view of the human chromosome x-centric proteome project', Journal of Proteome Research, vol. 12, no. 1, pp. 58-61. https://doi.org/10.1021/pr300844p
Yamamoto, Tadashi ; Nakayama, Keiichi ; Hirano, Hisashi ; Tomonaga, Takeshi ; Ishihama, Yasushi ; Yamada, Tetsushi ; Kondo, Tadashi ; Kodera, Yoshio ; Sato, Yuichi ; Araki, Norie ; Mamitsuka, Hiroshi ; Goshima, Naoki. / Integrated view of the human chromosome x-centric proteome project. In: Journal of Proteome Research. 2013 ; Vol. 12, No. 1. pp. 58-61.
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