MSIDV: A versatile tool to visualize biological indices from mass spectrometry imaging data

Eisuke Hayakawa, Yoshinori Fujimura, Daisuke Miura

Research output: Contribution to journalArticle

5 Citations (Scopus)

Abstract

Mass spectrometry imaging (MSI) visualizes the simultaneous lateral distribution of multiple compounds on sample surface. However, it is still difficult to visualize biological indices such as energy charge index from multiple compounds because of the lack of publicly available tools. Here we present MSIdV, a visualization tool for biological indices calculated from mass spectrometry imaging data, which can effectively scan a series of mass spectra and process, calculate and visualize user-defined index measures accurately with a number of signal processing features.

Original languageEnglish
Pages (from-to)3852-3854
Number of pages3
JournalBioinformatics
Volume32
Issue number24
DOIs
Publication statusPublished - Jan 1 2016

All Science Journal Classification (ASJC) codes

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

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