TY - GEN
T1 - Particle-Based model of cellular morphogenesis in budding yeast
AU - Leda, Marcin
AU - Okada, Satoshi
AU - Bi, Erfei
AU - Barral, Yves
AU - Goryachev, Andrew B.
PY - 2013/12/1
Y1 - 2013/12/1
N2 - We apply Lagrangian particle method combined with the level-set method to model morphogenesis of budding yeast on the subcellular level. We model the biochemical reactions, anisotropic diffusion, membrane-cytoplasmic transport of proteins and introduction of new membrane material (exocytosis) that occur on the plasma membrane. Exocytosis results in protrusion of the membrane surface. Hence, to model these phenomena we need to solve a system of reaction-diffusion-advection equations on the evolving surface.
AB - We apply Lagrangian particle method combined with the level-set method to model morphogenesis of budding yeast on the subcellular level. We model the biochemical reactions, anisotropic diffusion, membrane-cytoplasmic transport of proteins and introduction of new membrane material (exocytosis) that occur on the plasma membrane. Exocytosis results in protrusion of the membrane surface. Hence, to model these phenomena we need to solve a system of reaction-diffusion-advection equations on the evolving surface.
UR - http://www.scopus.com/inward/record.url?scp=84891274042&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84891274042&partnerID=8YFLogxK
M3 - Conference contribution
AN - SCOPUS:84891274042
SN - 9788494153181
T3 - Particle-Based Methods III: Fundamentals and Applications - Proceedings of the 3rd International Conference on Particle-based MethodsFundamentals and Applications, Particles 2013
SP - 145
EP - 152
BT - Particle-Based Methods III
T2 - 3rd International Conference on Particle-Based Methods Fundamentals and Applications, Particles 2013
Y2 - 18 September 2013 through 20 September 2013
ER -