TY - JOUR
T1 - Real-world data on NGS using the Oncomine DxTT for detecting genetic alterations in non-small-cell lung cancer
T2 - WJOG13019L
AU - Sakata, Shinya
AU - Otsubo, Kohei
AU - Yoshida, Hisako
AU - Ito, Kentaro
AU - Nakamura, Atsushi
AU - Teraoka, Shunsuke
AU - Matsumoto, Naohisa
AU - Shiraishi, Yoshimasa
AU - Haratani, Koji
AU - Tamiya, Motohiro
AU - Ikeda, Satoshi
AU - Miura, Satoru
AU - Tanizaki, Junko
AU - Omori, Shota
AU - Yoshioka, Hiroshige
AU - Hata, Akito
AU - Yamamoto, Nobuyuki
AU - Nakagawa, Kazuhiko
N1 - Funding Information:
We thank the patients, clinical staff, and study teams at Osaka City University and WJOG for contributing to this study. This study was funded by Thermo Fisher Scientific, Life Technologies Japan.
Funding Information:
We thank the patients, clinical staff, and study teams at Osaka City University and WJOG for contributing to this study. This study was funded by Thermo Fisher Scientific, Life Technologies Japan.
Publisher Copyright:
© 2021 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association.
PY - 2022/1
Y1 - 2022/1
N2 - Considering the increasing number of identified driver oncogene alterations, additional genetic tests are required to determine the treatment for advanced non-small-cell lung cancer (NSCLC). Next-generation sequencing can detect multiple driver oncogenes simultaneously, enabling the analysis of limited amounts of biopsied tissue samples. In this retrospective, multicenter study (UMIN ID000039523), we evaluated real-world clinical data using the Oncomine Dx Target Test Multi-CDx System (Oncomine DxTT) as a companion diagnostic system. Patients with NSCLC who were tested for a panel of 46 genes using the Oncomine DxTT between June 2019 and January 2020 were eligible for enrollment. Patients from 19 institutions affiliated to the West Japan Oncology Group were recruited. The primary endpoint of the study was the success rate of genetic alteration testing in four driver genes (EGFR, ALK, ROS1, and BRAF) using the Oncomine DxTT. In total, 533 patients were enrolled in the study. The success rate of genetic alteration testing for all four genes was 80.1% (95% CI 76.5%-83.4%). Surgical resection was associated with the highest success rate (88.0%), which was significantly higher than that for bronchoscopic biopsy (76.8%, P =.005). Multivariate analysis revealed a significant difference for surgical resection alone (P =.006, 95% CI 1.36-6.18, odds ratio 2.90). Although the success rate of genetic alteration testing immediately after Oncomine DxTT induction was not sufficient in this study, optimizing specimen quantity and quality may improve the use of driver gene testing in clinical settings.
AB - Considering the increasing number of identified driver oncogene alterations, additional genetic tests are required to determine the treatment for advanced non-small-cell lung cancer (NSCLC). Next-generation sequencing can detect multiple driver oncogenes simultaneously, enabling the analysis of limited amounts of biopsied tissue samples. In this retrospective, multicenter study (UMIN ID000039523), we evaluated real-world clinical data using the Oncomine Dx Target Test Multi-CDx System (Oncomine DxTT) as a companion diagnostic system. Patients with NSCLC who were tested for a panel of 46 genes using the Oncomine DxTT between June 2019 and January 2020 were eligible for enrollment. Patients from 19 institutions affiliated to the West Japan Oncology Group were recruited. The primary endpoint of the study was the success rate of genetic alteration testing in four driver genes (EGFR, ALK, ROS1, and BRAF) using the Oncomine DxTT. In total, 533 patients were enrolled in the study. The success rate of genetic alteration testing for all four genes was 80.1% (95% CI 76.5%-83.4%). Surgical resection was associated with the highest success rate (88.0%), which was significantly higher than that for bronchoscopic biopsy (76.8%, P =.005). Multivariate analysis revealed a significant difference for surgical resection alone (P =.006, 95% CI 1.36-6.18, odds ratio 2.90). Although the success rate of genetic alteration testing immediately after Oncomine DxTT induction was not sufficient in this study, optimizing specimen quantity and quality may improve the use of driver gene testing in clinical settings.
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U2 - 10.1111/cas.15176
DO - 10.1111/cas.15176
M3 - Article
C2 - 34704312
AN - SCOPUS:85118543917
VL - 113
SP - 221
EP - 228
JO - Cancer Science
JF - Cancer Science
SN - 1347-9032
IS - 1
ER -