Search of type 2 diabetes susceptibility gene on chromosome 20q

F. Takeuchi, K. Yanai, H. Inomata, N. Kuzuya, H. Kajio, S. Honjo, N. Takeda, Y. Kaburagi, K. Yasuda, S. Shirasawa, Takehiko Sasazuki, N. Kato

Research output: Contribution to journalArticle

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Abstract

Significant evidence of linkage to type 2 diabetes (T2D) has been shown in a relatively broad region on chromosome 20q, where the hepatocyte nuclear factor-4α (HNF4A) has been noted as a positional candidate. To systematically evaluate genetic susceptibility to T2D in the relevant region, we examined the disease association by using 1145 SNPs in two-step screening in the Japanese population. The marker screening enabled us to identify significant disease association in the lipopolysaccharide binding protein (LBP) but not in the HNF4A locus. In a 17.7-Mb interval screened, the strongest association was identified for a SNP, rs2232592, located in the intron of LBP, with an estimated odds ratio of 1.73 (95% CI 1.30-2.31) (P = 0.0002) in the whole study panel involving 675 case and 474 control subjects. Our data suggest that the LBP gene may confer genetic susceptibility to T2D and this warrants further replication study.

Original languageEnglish
Pages (from-to)1100-1106
Number of pages7
JournalBiochemical and Biophysical Research Communications
Volume357
Issue number4
DOIs
Publication statusPublished - Jun 15 2007
Externally publishedYes

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Chromosomes
Medical problems
Type 2 Diabetes Mellitus
Genes
Genetic Predisposition to Disease
Single Nucleotide Polymorphism
Screening
Hepatocyte Nuclear Factor 4
Introns
Odds Ratio
Population
lipopolysaccharide-binding protein

All Science Journal Classification (ASJC) codes

  • Biophysics
  • Biochemistry
  • Molecular Biology
  • Cell Biology

Cite this

Takeuchi, F., Yanai, K., Inomata, H., Kuzuya, N., Kajio, H., Honjo, S., ... Kato, N. (2007). Search of type 2 diabetes susceptibility gene on chromosome 20q. Biochemical and Biophysical Research Communications, 357(4), 1100-1106. https://doi.org/10.1016/j.bbrc.2007.04.063

Search of type 2 diabetes susceptibility gene on chromosome 20q. / Takeuchi, F.; Yanai, K.; Inomata, H.; Kuzuya, N.; Kajio, H.; Honjo, S.; Takeda, N.; Kaburagi, Y.; Yasuda, K.; Shirasawa, S.; Sasazuki, Takehiko; Kato, N.

In: Biochemical and Biophysical Research Communications, Vol. 357, No. 4, 15.06.2007, p. 1100-1106.

Research output: Contribution to journalArticle

Takeuchi, F, Yanai, K, Inomata, H, Kuzuya, N, Kajio, H, Honjo, S, Takeda, N, Kaburagi, Y, Yasuda, K, Shirasawa, S, Sasazuki, T & Kato, N 2007, 'Search of type 2 diabetes susceptibility gene on chromosome 20q', Biochemical and Biophysical Research Communications, vol. 357, no. 4, pp. 1100-1106. https://doi.org/10.1016/j.bbrc.2007.04.063
Takeuchi, F. ; Yanai, K. ; Inomata, H. ; Kuzuya, N. ; Kajio, H. ; Honjo, S. ; Takeda, N. ; Kaburagi, Y. ; Yasuda, K. ; Shirasawa, S. ; Sasazuki, Takehiko ; Kato, N. / Search of type 2 diabetes susceptibility gene on chromosome 20q. In: Biochemical and Biophysical Research Communications. 2007 ; Vol. 357, No. 4. pp. 1100-1106.
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