TY - JOUR
T1 - SMC complexes
T2 - Lifting the lid on loop extrusion
AU - Higashi, Torahiko L.
AU - Uhlmann, Frank
N1 - Funding Information:
We thank Maxim Molodtsov and all our laboratory members for discussions and critical comments on the manuscript. This work received funding from the European Research Council ( ERC ) under the Horizon 2020 program (grant agreement No. 670412) and from The Francis Crick Institute , which receives its core funding from Cancer Research UK (FC001198), the UK Medical Research Council (FC001198), and the Wellcome Trust (FC001198).
Publisher Copyright:
© 2022
PY - 2022/2
Y1 - 2022/2
N2 - Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how structural insight into the SMC complex cohesin has led to a molecular framework for both activities: a Brownian ratchet motion, associated with topological DNA entry, might repeat itself to elicit loop extrusion. After contrasting alternative loop extrusion models, we explore whether topological loading or loop extrusion is more adept at explaining in vivo SMC complex function. SMC variants that experimentally separate topological loading from loop extrusion will in the future probe their respective contributions to chromosome biology.
AB - Loop extrusion has emerged as a prominent hypothesis for how SMC complexes shape chromosomes – single molecule in vitro observations have yielded fascinating images of this process. When not extruding loops, SMC complexes are known to topologically entrap one or more DNAs. Here, we review how structural insight into the SMC complex cohesin has led to a molecular framework for both activities: a Brownian ratchet motion, associated with topological DNA entry, might repeat itself to elicit loop extrusion. After contrasting alternative loop extrusion models, we explore whether topological loading or loop extrusion is more adept at explaining in vivo SMC complex function. SMC variants that experimentally separate topological loading from loop extrusion will in the future probe their respective contributions to chromosome biology.
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U2 - 10.1016/j.ceb.2021.12.003
DO - 10.1016/j.ceb.2021.12.003
M3 - Review article
C2 - 35016058
AN - SCOPUS:85122529959
VL - 74
SP - 13
EP - 22
JO - Current Opinion in Cell Biology
JF - Current Opinion in Cell Biology
SN - 0955-0674
ER -