トランスオミクス医学研究センター

研究成果

Monoclonal antibody 8E3 against mouse Dhx9/NDHII/RHA

Ohkawa, Y., 6 1 2010, : : Hybridoma. 29, 3, 1 p.

研究成果: ジャーナルへの寄稿小調査

Monoclonal antibody specific for Dhx9/NDHII/RHA

Kotani, M., Harada, A., Odawara, J., Azuma, M., Okada, S., Nishiyama, Y., Nakamura, M., Tachibana, T. & Ohkawa, Y., 6 1 2010, : : Hybridoma. 29, 3, p. 259-261 3 p.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)

Mouse polycomb group gene Cbx2 promotes osteoblastic but suppresses adipogenic differentiation in postnatal long bones

Katoh-Fukui, Y., Baba, T., Sato, T., Otake, H., Nagakui-Noguchi, Y., Shindo, M., Suyama, M., Ohkawa, Y., Tsumura, H., Morohashi, K. I. & Fukami, M., 3 2019, : : Bone. 120, p. 219-231 13 p.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)

MTORC1 and muscle regeneration are regulated by the LINC00961-encoded SPAR polypeptide

Matsumoto, A., Pasut, A., Matsumoto, M., Yamashita, R., Fung, J., Monteleone, E., Saghatelian, A., Nakayama, K. I., Clohessy, J. G. & Pandolfi, P. P., 1 12 2017, : : Nature. 541, 7636, p. 228-232 5 p.

研究成果: ジャーナルへの寄稿記事

167 引用 (Scopus)

mTORC1 and muscle regeneration are regulated by the LINC00961-encoded SPAR polypeptide.

Matsumoto, A., Pasut, A., Matsumoto, M., Yamashita, R., Fung, J., Monteleone, E., Saghatelian, A., Nakayama, K., Clohessy, J. & Pandolfi, P. P., 2017, : : Nature. 541, 7636, p. 228 5 p., 541.

研究成果: ジャーナルへの寄稿記事

Mucosal dysbiosis in patients with gastrointestinal follicular lymphoma

Zeze, K., Hirano, A., Torisu, T., Esaki, M., Shibata, H., Moriyama, T., Umeno, J., Fujioka, S., Okamoto, Y., Fuyuno, Y., Matsuno, Y. & Kitazono, T., 1 1 2020, (受理済み/印刷中) : : Hematological Oncology.

研究成果: ジャーナルへの寄稿記事

Myeloperoxidase exacerbates secondary injury by generating highly reactive oxygen species and mediating neutrophil recruitment in experimental spinal cord injury

Kubota, K., Saiwai, H., Kumamaru, H., Maeda, T., Ohkawa, Y., Aratani, Y., Nagano, T., Iwamoto, Y. & Okada, S., 7 15 2012, : : Spine. 37, 16, p. 1363-1369 7 p.

研究成果: ジャーナルへの寄稿記事

33 引用 (Scopus)

MyoD targets chromatin remodeling complexes to the myogenin locus prior to forming a stable DNA-bound complex

De La Serna, I. L., Ohkawa, Y., Berkes, C. A., Bergstrom, D. A., Dacwag, C. S., Tapscott, S. J. & Imbalzano, A. N., 5 1 2005, : : Molecular and cellular biology. 25, 10, p. 3997-4009 13 p.

研究成果: ジャーナルへの寄稿記事

193 引用 (Scopus)

Myogenic microRNA expression requires ATP-dependent chromatin remodeling enzyme function

Mallappa, C., Nasipak, B. T., Etheridge, L., Androphy, E. J., Jones, S. N., Sagerström, C. G., Ohkawa, Y. & Imbalzano, A. N., 7 1 2010, : : Molecular and cellular biology. 30, 13, p. 3176-3186 11 p.

研究成果: ジャーナルへの寄稿記事

21 引用 (Scopus)
11 引用 (Scopus)

New horizons in biological research developed by nextgeneration proteomics: Say good-bye to western blotting

Nakatsumi, H., Matsumoto, M. & Nakayama, K., 12 1 2012, : : Seikagaku. 84, 1, p. 53-57 5 p.

研究成果: ジャーナルへの寄稿記事

New insight into the role of the calvin cycle: Reutilization of CO 2 emitted through sugar degradation

Shimizu, R., Dempo, Y., Nakayama, Y., Nakamura, S., Bamba, T., Fukusaki, E. & Fukui, T., 7 1 2015, : : Scientific reports. 5, 11617.

研究成果: ジャーナルへの寄稿記事

11 引用 (Scopus)

Noncanonical Pathway for Regulation of CCL2 Expression by an mTORC1-FOXK1 Axis Promotes Recruitment of Tumor-Associated Macrophages

Nakatsumi, H., Matsumoto, M. & Nakayama, K. I., 11 28 2017, : : Cell Reports. 21, 9, p. 2471-2486 16 p.

研究成果: ジャーナルへの寄稿記事

20 引用 (Scopus)

Nucleolar structure and function are regulated by the deubiquitylating enzyme USP36

Endo, A., Matsumoto, M., Inada, T., Yamamoto, A., Nakayama, K. I., Kitamura, N. & Komada, M., 3 1 2009, : : Journal of cell science. 122, 5, p. 678-686 9 p.

研究成果: ジャーナルへの寄稿記事

45 引用 (Scopus)

Opposing calcium-dependent signalling pathways control skeletal muscle differentiation by regulating a chromatin remodelling enzyme

Nasipak, B. T., Padilla-Benavides, T., Green, K. M., Leszyk, J. D., Mao, W., Konda, S., Sif, S., Shaffer, S. A., Ohkawa, Y. & Imbalzano, A. N., 6 17 2015, : : Nature communications. 6, 7441.

研究成果: ジャーナルへの寄稿記事

12 引用 (Scopus)

Ossification of the posterior longitudinal ligament of the lumbar spine: A case series

Okada, S., Maeda, T., Saiwai, H., Ohkawa, Y., Shiba, K. & Iwamoto, Y., 11 1 2010, : : Neurosurgery. 67, 5, p. 1311-1318 8 p.

研究成果: ジャーナルへの寄稿記事

6 引用 (Scopus)

Overexpression of an isopentenyl diphosphate isomerase gene to enhance trans-polyisoprene production in Eucommia ulmoides Oliver

Chen, R., Harada, Y., Bamba, T., Nakazawa, Y. & Gyokusen, K., 10 30 2012, : : BMC Biotechnology. 12, 78.

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)

Overexpression of Ephrin A2 receptors in cancer stromal cells is a prognostic factor for the relapse of gastric cancer

Kikuchi, S., Kaibe, N., Morimoto, K., Fukui, H., Niwa, H., Maeyama, Y., Takemura, M., Matsumoto, M., Nakamori, S., Miwa, H., Hirota, S. & Sasako, M., 7 27 2015, : : Gastric Cancer. 18, 3, p. 485-494 10 p.

研究成果: ジャーナルへの寄稿記事

9 引用 (Scopus)

Partial SPAST and DPY30 deletions in a Japanese spastic paraplegia type 4 family

Miura, S., Shibata, H., Kida, H., Noda, K., Toyama, T., Iwasaki, N., Iwaki, A., Ayabe, M., Aizawa, H., Taniwaki, T. & Fukumaki, Y., 2 1 2011, : : Neurogenetics. 12, 1, p. 25-31 7 p.

研究成果: ジャーナルへの寄稿記事

10 引用 (Scopus)

Pathological changes of distal motor neurons after complete spinal cord injury

Yokota, K., Kubota, K., Kobayakawa, K., Saito, T., Hara, M., Kijima, K., Maeda, T., Katoh, H., Ohkawa, Y., Nakashima, Y. & Okada, S., 1 9 2019, : : Molecular Brain. 12, 1, 4.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)

Performance of small-domain monolithic silica columns in nano-liquid chromatography and comparison with commercial packed bed columns with 2 µm particles

Hara, T., Izumi, Y., Hata, K., V. Baron, G., Bamba, T. & Desmet, G., 1 1 2020, (受理済み/印刷中) : : Journal of Chromatography A. 460804.

研究成果: ジャーナルへの寄稿記事

Periostin Promotes Scar Formation through the Interaction between Pericytes and Infiltrating Monocytes/Macrophages after Spinal Cord Injury

Yokota, K., Kobayakawa, K., Saito, T., Hara, M., Kijima, K., Ohkawa, Y., Harada, A., Okazaki, K., Ishihara, K., Yoshida, S., Kudo, A., Iwamoto, Y. & Okada, S., 3 1 2017, : : American Journal of Pathology. 187, 3, p. 639-653 15 p.

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)

Persistent detection of alternatively spliced BCR-ABL variant results in a failure to achieve deep molecular response

Yuda, J., Miyamoto, T., Odawara, J., Ohkawa, Y., Semba, Y., Hayashi, M., Miyamura, K., Tanimoto, M., Yamamoto, K., Taniwaki, M. & Akashi, K., 11 2017, : : Cancer Science. 108, 11, p. 2204-2212 9 p.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)

Phosphoproteomics analyses show subnetwork systems in T-cell receptor signaling

Hatano, A., Matsumoto, M. & Nakayama, K. I., 10 1 2016, : : Genes to Cells. 21, 10, p. 1095-1112 18 p.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Phosphorylation of Noxo1 at threonine 341 regulates its interaction with Noxa1 and the superoxide-producing activity of Nox1

Yamamoto, A., Takeya, R., Matsumoto, M., Nakayama, K. & Sumimoto, H., 10 1 2013, : : FEBS Journal. 280, 20, p. 5145-5159 15 p.

研究成果: ジャーナルへの寄稿記事

20 引用 (Scopus)

Phosphorylation of the chromodomain changes the binding specificity of Cbx2 for methylated histone H3

Hatano, A., Matsumoto, M., Higashinakagawa, T. & Nakayama, K. I., 6 18 2010, : : Biochemical and Biophysical Research Communications. 397, 1, p. 93-99 7 p.

研究成果: ジャーナルへの寄稿記事

26 引用 (Scopus)

PKM1 Confers Metabolic Advantages and Promotes Cell-Autonomous Tumor Cell Growth

Morita, M., Sato, T., Nomura, M., Sakamoto, Y., Inoue, Y., Tanaka, R., Ito, S., Kurosawa, K., Yamaguchi, K., Sugiura, Y., Takizaki, H., Yamashita, Y., Katakura, R., Sato, I., Kawai, M., Okada, Y., Watanabe, H., Kondoh, G., Matsumoto, S., Kishimoto, A. および12人, Obata, M., Matsumoto, M., Fukuhara, T., Motohashi, H., Suematsu, M., Komatsu, M., Nakayama, K. I., Watanabe, T., Soga, T., Shima, H., Maemondo, M. & Tanuma, N., 3 12 2018, : : Cancer Cell. 33, 3, p. 355-367.e7

研究成果: ジャーナルへの寄稿記事

28 引用 (Scopus)

Plasma gelsolin facilitates interaction between β2 glycoprotein I and α5β1 integrin

Bohgaki, M., Matsumoto, M., Atsumi, T., Kondo, T., Yasuda, S., Horita, T., Nakayama, K. I., Okumura, F., Hatakeyama, S. & Koike, T., 1 1 2011, : : Journal of Cellular and Molecular Medicine. 15, 1, p. 141-151 11 p.

研究成果: ジャーナルへの寄稿記事

17 引用 (Scopus)

Polar Lipid Profiling by Supercritical Fluid Chromatography/Mass Spectrometry Method

Yamada, T., Nagasawa, Y., Taguchi, K., Fukusaki, E. & Bamba, T., 4 15 2015, Polar Lipids: Biology, Chemistry, and Technology. Elsevier Inc., p. 439-462 24 p.

研究成果: 著書/レポートタイプへの貢献

3 引用 (Scopus)

Polymorphism analysis of the upstream region of the human N-methyl-D-aspartate receptor subunit NR1 gene (GRIN1): Implications for schizophrenia

Tani, A., Kikuta, R., Itoh, K., Joo, A., Shibata, H., Ninomiya, H., Tashiro, N. & Fukumaki, Y., 11 1 2002, : : Schizophrenia research. 58, 1, p. 83-86 4 p.

研究成果: ジャーナルへの寄稿記事

19 引用 (Scopus)

Positive association of Phencyclidine-responsive genes, PDE4A and PLAT, with schizophrenia

Deng, X., Takaki, H., Wang, L., Kuroki, T., Nakahara, T., Hashimoto, K., Ninomiya, H., Arinami, T., Inada, T., Ujike, H., Itokawa, M., Tochigi, M., Watanabe, Y., Someya, T., Kunugi, H., Iwata, N., Ozaki, N., Shibata, H. & Fukumaki, Y., 12 1 2011, : : American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics. 156, 7, p. 850-858 9 p.

研究成果: ジャーナルへの寄稿記事

13 引用 (Scopus)

Positive association of the AMPA receptor subunit GluR4 gene (GRIA4) haplotype with schizophrenia: Linkage disequilibrium mapping using SNPs evenly distributed across the gene region

Makino, C., Fujii, Y., Kikuta, R., Hirata, N., Tani, A., Shibata, A., Ninomiya, H., Tashiro, N., Shibata, H. & Fukumaki, Y., 1 1 2003, : : American Journal of Medical Genetics - Neuropsychiatric Genetics. 116 B, 1, p. 17-22 6 p.

研究成果: ジャーナルへの寄稿記事

47 引用 (Scopus)

Positive associations of polymorphisms in the metabotropic glutamate receptor type 3 gene (GRM3) with schizophrenia

Fujii, Y., Shibata, H., Kikuta, R., Makino, C., Tani, A., Hirata, N., Shibata, A., Ninomiya, H., Tashiro, N. & Fukumaki, Y., 6 2003, : : Psychiatric Genetics. 13, 2, p. 71-76 6 p.

研究成果: ジャーナルへの寄稿記事

99 引用 (Scopus)

Positive associations of polymorphisms in the metabotropic glutamate receptor type 8 gene (GRM8) with schizophrenia

Takaki, H., Kikuta, R., Shibata, H., Ninomiya, H., Tashiro, N. & Fukumaki, Y., 7 1 2004, : : American Journal of Medical Genetics - Neuropsychiatric Genetics. 128 B, 1, p. 6-14 9 p.

研究成果: ジャーナルへの寄稿記事

42 引用 (Scopus)

Prediction of periodontal inflammation via metabolic profiling of saliva

Kuboniwa, M., Sakanaka, A., Hashino, E., Bamba, T., Fukusaki, E. & Amano, A., 11 1 2016, : : Journal of Dental Research. 95, 12, p. 1381-1386 6 p.

研究成果: ジャーナルへの寄稿記事

20 引用 (Scopus)

Preferential interaction of TIP120A with Cul1 that is not modified by NEDD8 and not associated with Skp1

Oshikawa, K., Matsumoto, M., Yada, M., Kamura, T., Hatakeyama, S. & Nakayama, K. I., 4 18 2003, : : Biochemical and Biophysical Research Communications. 303, 4, p. 1209-1216 8 p.

研究成果: ジャーナルへの寄稿記事

52 引用 (Scopus)

Production of a rat monoclonal antibody against Brg1

Ohkawa, Y., Harada, A., Nakamura, M., Yoshimura, S. & Tachibana, T., 12 1 2009, : : Hybridoma. 28, 6, p. 463-466 4 p.

研究成果: ジャーナルへの寄稿記事

15 引用 (Scopus)

Production of a rat monoclonal antibody specific for Myf5

Harada, A., Okada, S., Odawara, J., Kumamaru, H., Saiwai, H., Aoki, M., Nakamura, M., Nishiyama, Y. & Ohkawa, Y., 2 1 2010, : : Hybridoma. 29, 1, p. 59-62 4 p.

研究成果: ジャーナルへの寄稿記事

5 引用 (Scopus)

Production of BBF2H7-derived small peptide fragments via endoplasmic reticulum stress-dependent regulated intramembrane proteolysis

Matsuhisa, K., Saito, A., Cai, L., Kaneko, M., Okamoto, T., Sakaue, F., Asada, R., Urano, F., Yanagida, K., Okochi, M., Kudo, Y., Matsumoto, M., Nakayama, K. I. & Imaizumi, K., 1 1 2020, : : FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 34, 1, p. 865-880 16 p.

研究成果: ジャーナルへの寄稿記事

公開

Production of Eucommia-rubber from Eucommia ulmoides Oliv. (Hardy Rubber Tree)

Nakazawa, Y., Bamba, T., Takeda, T., Uefuji, H., Harada, Y., Li, X., Chen, R., Inoue, S., Tutumi, M., Shimizu, T., Su, Y. Q., Gyokusen, K., Fukusaki, E. & Kobayashi, A., 2009, : : Plant Biotechnology. 26, 1, p. 71-79 9 p.

研究成果: ジャーナルへの寄稿記事

24 引用 (Scopus)
5 引用 (Scopus)

Prolonged inhibition of hepatocellular carcinoma cell proliferation by combinatorial expression of defined transcription factors

Takashima, Y., Horisawa, K., Udono, M., Ohkawa, Y. & Suzuki, A., 11 2018, : : Cancer Science. 109, 11, p. 3543-3553 11 p.

研究成果: ジャーナルへの寄稿記事

7 引用 (Scopus)

Protection of stromal cell-derived factor 2 by heat shock protein 72 prevents oxaliplatin-induced cell death in oxaliplatin-resistant human gastric cancer cells

Takahashi, K., Tanaka, M., Yashiro, M., Matsumoto, M., Ohtsuka, A., Nakayama, K. I., Izumi, Y., Nagayama, K., Miura, K., Iwao, H. & Shiota, M., 8 1 2016, : : Cancer Letters. 378, 1, p. 8-15 8 p.

研究成果: ジャーナルへの寄稿記事

5 引用 (Scopus)

Proteome of ubiquitin/MVB pathway: Possible involvement of iron-induced ubiquitylation of transferrin receptor in lysosomal degradation

Tachiyama, R., Ishikawa, D., Matsumoto, M., Nakayama, K. I., Yoshimori, T., Yokota, S., Himeno, M., Tanaka, Y. & Fujita, H., 4 1 2011, : : Genes to Cells. 16, 4, p. 448-466 19 p.

研究成果: ジャーナルへの寄稿記事

16 引用 (Scopus)

Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin

Oshikawa, K., Matsumoto, M., Oyamada, K. & Nakayama, K. I., 2 3 2012, : : Journal of Proteome Research. 11, 2, p. 796-807 12 p.

研究成果: ジャーナルへの寄稿記事

27 引用 (Scopus)
71 引用 (Scopus)

Protrudin regulates endoplasmic reticulum morphology and function associated with the pathogenesis of hereditary spastic paraplegia

Hashimoto, Y., Shirane, M., Matsuzaki, F., Saita, S., Ohnishi, T. & Nakayama, K. I., 1 1 2014, : : Journal of Biological Chemistry. 289, 19, p. 12946-12961 16 p.

研究成果: ジャーナルへの寄稿記事

26 引用 (Scopus)
50 引用 (Scopus)

PSMC5, a 19S proteasomal ATPase, regulates cocaine action in the nucleus accumbens

Ohnishi, Y. H., Ohnishi, Y. N., Nakamura, T., Ohno, M., Kennedy, P. J., Yasuyuki, O., Nishi, A., Neve, R., Tsuzuki, T. & Nestler, E. J., 5 11 2015, : : PloS one. 10, 5, e0126710.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)