システム生物工学

研究成果

Expression and characterization of a sigma-class glutathione S-transferase of the fall webworm, Hyphantria cunea

Yamamoto, K., Fujii, H., Aso, Y., Banno, Y. & Koga, K., 3 1 2007, : : Bioscience, Biotechnology and Biochemistry. 71, 2, p. 553-560 8 p.

研究成果: ジャーナルへの寄稿記事

53 引用 (Scopus)

Extensive genomic diversity and selective conservation of virulence-determinants in enterohemorrhagic Escherichia coli strains of O157 and non-O157 serotypes

Ogura, Y., Ooka, T., Asadulghani, Terajima, J., Nougayrède, J. P., Kurokawa, K., Tashiro, K., Tobe, T., Nakayama, K., Kuhara, S., Oswald, E., Watanabe, H. & Hayashi, T., 7 10 2007, : : Genome biology. 8, 7, R138.

研究成果: ジャーナルへの寄稿記事

71 引用 (Scopus)

Functional gene screening system identified TRPV4 as a regulator of chondrogenic differentiation

Muramatsu, S., Wakabayashi, M., Ohno, T., Amano, K., Ooishi, R., Sugahara, T., Shiojiri, S., Tashiro, K., Suzuki, Y., Nishimura, R., Kuhara, S., Sugano, S., Yoneda, T. & Matsuda, A., 11 2 2007, : : Journal of Biological Chemistry. 282, 44, p. 32158-32167 10 p.

研究成果: ジャーナルへの寄稿記事

133 引用 (Scopus)

Identification of bottom-fermenting yeast genes expressed during lager beer fermentation

Yoshida, S., Hashimoto, K., Shimada, E., Ishiguro, T., Minato, T., Mizutani, S., Yoshimoto, H., Tashiro, K., Kuhara, S. & Kobayashi, O., 7 1 2007, : : Yeast. 24, 7, p. 599-606 8 p.

研究成果: ジャーナルへの寄稿記事

20 引用 (Scopus)

Integrated comprehensive workbench for systems biology: Inference of genetic interaction and systems analysis of metabolic pathways

Nakatsui, M., Maki, Y., Sekiguchi, T. & Okamoto, M., 12 1 2007, WMSCI 2007 - The 11th World Multi-Conference on Systemics, Cybernetics and Informatics, Jointly with the 13th International Conference on Information Systems Analysis and Synthesis, ISAS 2007 - Proc.. p. 7-12 6 p. (WMSCI 2007 - The 11th World Multi-Conference on Systemics, Cybernetics and Informatics, Jointly with the 13th International Conference on Information Systems Analysis and Synthesis, ISAS 2007 - Proc.; 巻数 4).

研究成果: 著書/レポートタイプへの貢献会議での発言

Involvement of IL-10 in the suppression of antibody production by in vitro immunized peripheral blood mononuclear cells

Yamashita, M., Katakura, Y., Aiba, Y., Matsumoto, S. E., Morihara, K., Teruya, K., Ichikawa, A. & Shirahata, S., 12 1 2007, : : Cytotechnology. 55, 2-3, p. 71-77 7 p.

研究成果: ジャーナルへの寄稿記事

Kinetic modeling and sensitivity analysis of acetone-butanol-ethanol production

Shinto, H., Tashiro, Y., Yamashita, M., Kobayashi, G., Sekiguchi, T., Hanai, T., Kuriya, Y., Okamoto, M. & Sonomoto, K., 8 1 2007, : : Journal of Biotechnology. 131, 1, p. 45-56 12 p.

研究成果: ジャーナルへの寄稿記事

86 引用 (Scopus)

Lantibiotic engineering: Molecular characterization and exploitation of lantibiotic-synthesizing enzymes for peptide engineering

Nagao, J. I., Aso, Y., Shioya, K., Nakayama, J. & Sonomoto, K., 9 1 2007, : : Journal of Molecular Microbiology and Biotechnology. 13, 4, p. 235-242 8 p.

研究成果: ジャーナルへの寄稿記事

19 引用 (Scopus)

Mapping analysis of carotenoids-binding protein of Bombyx mori by restriction fragment length polymorphism

Hara, W., Sosnicki, S., Banno, Y., Fujimoto, H., Takada, N., Maekawa, H., Fujii, H., Wells, M. A. & Tsuchida, K., 10 1 2007, : : Journal of Insect Biotechnology and Sericology. 76, 3, p. 149-154 6 p.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Mathematical modeling of G2/M phase in the cell cycle with involving the p53/Mdm2 oscillation system

Tashima, Y., Kisaka, Y., Hanai, T., Hamada, H., Eguchi, Y. & Okamoto, M., 1 1 2007, IFMBE Proceedings. Kim, S. I. & Suh, T. S. (版). 1 版 Springer Verlag, p. 197-200 4 p. (IFMBE Proceedings; 巻数 14, 番号 1).

研究成果: 著書/レポートタイプへの貢献会議での発言

4 引用 (Scopus)

Molecular Monitoring of Bacterial Community Structure in Long-Aged Nukadoko: Pickling Bed of Fermented Rice Bran Dominated by Slow-Growing Lactobacilli

Nakayama, J., Hoshiko, H., Fukuda, M., Tanaka, H., Sakamoto, N., Tanaka, S., Ohue, K., Sakai, K. & Sonomoto, K., 12 1 2007, : : Journal of Bioscience and Bioengineering. 104, 6, p. 481-489 9 p.

研究成果: ジャーナルへの寄稿記事

31 引用 (Scopus)

Multi-layered network structure of amino acid (AA) metabolism characterized by each essential AA-deficient condition

Shikata, N., Maki, Y., Noguchi, Y., Mori, M., Hanai, T., Takahashi, M. & Okamoto, M., 7 1 2007, : : Amino Acids. 33, 1, p. 113-121 9 p.

研究成果: ジャーナルへの寄稿記事

25 引用 (Scopus)

Novel high-efficient butanol production from butyrate by non-growing Clostridium saccharoperbutylacetonicum N1-4 (ATCC 13564) with methyl viologen

Tashiro, Y., Shinto, H., Hayashi, M., Baba, S. I., Kobayashi, G. & Sonomoto, K., 9 1 2007, : : Journal of Bioscience and Bioengineering. 104, 3, p. 238-240 3 p.

研究成果: ジャーナルへの寄稿記事

89 引用 (Scopus)

Pakistan rice genetic resources-I: Grain morphological diversity and its distribution

Siddiqui, S. U., Kumamaru, T. & Satoh, H., 6 1 2007, : : Pakistan Journal of Botany. 39, 3, p. 841-848 8 p.

研究成果: ジャーナルへの寄稿記事

11 引用 (Scopus)

Pakistan rice genetic resources-II: Distribution pattern of grain morphological diversity

Siddiqui, S. U., Kumamaru, T. & Satoh, H., 10 2007, : : Pakistan Journal of Botany. 39, 5, p. 1533-1538 6 p.

研究成果: ジャーナルへの寄稿記事

6 引用 (Scopus)

Propionibacterium acnes acts as an adjuvant in in vitro immunization of human peripheral blood mononuclear cells

Yeon, S. J., Matsumoto, S. E., Yamashita, M., Tomimatsu, K., Teruya, K., Katakura, Y. & Shirahata, S., 11 21 2007, : : Bioscience, Biotechnology and Biochemistry. 71, 8, p. 1963-1969 7 p.

研究成果: ジャーナルへの寄稿記事

6 引用 (Scopus)

Protein body biogenesis in cereal endosperms

Kumamaru, T., Ogawa, M., Satoh, H. & Okita, T. W., 3 31 2007, Edosperm: Developmental and Molecular Biology. Olsen, O-A. (版). p. 141-158 18 p. (Plant Cell Monographs; 巻数 8).

研究成果: 著書/レポートタイプへの貢献

24 引用 (Scopus)

Proteomic profiling of the silkworm skeletal muscle proteins during larval-pupal metamorphosis

Zhang, P., Aso, Y., Jikuya, H., Kusakabe, T., Lee, M., Kawaguchi, Y., Yamamoto, K., Banno, Y. & Fujii, H., 6 1 2007, : : Journal of Proteome Research. 6, 6, p. 2295-2303 9 p.

研究成果: ジャーナルへの寄稿記事

21 引用 (Scopus)

Purification, characterization and cloning of a chymotrypsin inhibitor (CI-9) from the hemolymph of the silkworm, Bombyx mori

Zhao, P., Xia, Q., Li, J., Fujii, H., Banno, Y. & Xiang, Z., 8 1 2007, : : Protein Journal. 26, 5, p. 349-357 9 p.

研究成果: ジャーナルへの寄稿記事

8 引用 (Scopus)

Purification and characterization of a novel sigma-class glutathione S-transferase of the fall webworm, Hyphantria cunea

Yamamoto, K., Miake, F. & Aso, Y., 8 1 2007, : : Journal of Applied Entomology. 131, 7, p. 466-471 6 p.

研究成果: ジャーナルへの寄稿記事

9 引用 (Scopus)

Rapid removal of trace HCHO from indoor air by an air purifier consisting of a continuous concentrator and photocatalytic reactor and its computer simulation

Shiraishi, F., Nomura, T., Yamaguchi, S. & Ohbuchi, Y., 3 1 2007, : : Chemical Engineering Journal. 127, 1-3, p. 157-165 9 p.

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)

Recent advances in the generation of human monoclonal antibody

Yamashita, M., Katakura, Y. & Shirshata, S., 2007, : : Cytotechnology. 55, 2-3, p. 55-60 6 p.

研究成果: ジャーナルへの寄稿記事

公開

Recent advances in the generation of human monoclonal antibody

Yamashita, M., Katakura, Y. & Shirahata, S., 12 1 2007, : : Cytotechnology. 55, 2-3, p. 55-60 6 p.

研究成果: ジャーナルへの寄稿評論記事

17 引用 (Scopus)

Screening of high-permissive silkworm strains for efficient recombinant protein production in Autographa californica nuclear polyhedrosis virus (AcNPV)

Lee, J. M., Mon, H., Takahashi, M., Kawakami, N., Mitsunobu, H., Banno, Y., Koga, K., Uchino, K., Kawaguchi, Y. & Kusakabe, T., 6 1 2007, : : Journal of Insect Biotechnology and Sericology. 76, 2, p. 101-105 5 p.

研究成果: ジャーナルへの寄稿記事

9 引用 (Scopus)

Sequence comparison of mariner-like elements among the populations of Bombyx mandarina inhabiting China, Korea and Japan

Kawanishi, Y., Takaishi, R., Banno, Y., Fujimoto, H., Nho, S. K., Maekawa, H. & Nakajima, Y., 6 1 2007, : : Journal of Insect Biotechnology and Sericology. 76, 2, p. 79-87 9 p.

研究成果: ジャーナルへの寄稿記事

5 引用 (Scopus)

Siamycin attenuates fsr quorum sensing mediated by a gelatinase biosynthesis-activating pheromone in Enterococcus faecalis

Nakayama, J., Tanaka, E., Kariyama, R., Nagata, K., Nishiguchi, K., Mitsuhata, R., Uemura, Y., Tanokura, M., Kumon, H. & Sonomoto, K., 2 1 2007, : : Journal of bacteriology. 189, 4, p. 1358-1365 8 p.

研究成果: ジャーナルへの寄稿記事

55 引用 (Scopus)

Structural analysis and characterization of lacticin Q, a novel bacteriocin belonging to a new family of unmodified bacteriocins of gram-positive bacteria

Fujita, K., Ichimasa, S., Zendo, T., Koga, S., Yoneyama, F., Nakayama, J. & Sonomoto, K., 5 1 2007, : : Applied and environmental microbiology. 73, 9, p. 2871-2877 7 p.

研究成果: ジャーナルへの寄稿記事

88 引用 (Scopus)

TAK1 represses transcription of the human telomerase reverse transcriptase gene

Fujiki, T., Miura, T., Maura, M., Shiraishi, H., Nishimura, S., Imada, Y., Uehara, N., Tashiro, K., Shirahata, S. & Katakura, Y., 8 9 2007, : : Oncogene. 26, 36, p. 5258-5266 9 p.

研究成果: ジャーナルへの寄稿記事

33 引用 (Scopus)

The microtubule destabilizer stathmin mediates the development of dendritic arbors in neuronal cells

Ohkawa, N., Fujitani, K., Tokunaga, E., Furuya, S. & Inokuchi, K., 4 15 2007, : : Journal of cell science. 120, 8, p. 1447-1456 10 p.

研究成果: ジャーナルへの寄稿記事

63 引用 (Scopus)

TIMP-3 and Phosphatidylinositol 3-kinase genes were found to be related to the progression of colon cancer in a comparison of pneumoperitoneum and laparotomy in a murine model

Tanaka, F., Sonoda, H., Okamoto, M., Mimori, K., Utsunomiya, T., Inoue, H., Hanai, T. & Mori, M., 3 1 2007, : : Surgery Today. 37, 3, p. 220-225 6 p.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)
2008

A BAC-based integrated linkage map of the silkworm Bombyx mori

Yamamoto, K., Nohata, J., Kadono-Okuda, K., Narukawa, J., Sasanuma, M., Sasanuma, S. I., Minami, H., Shimomura, M., Suetsugu, Y., Banno, Y., Osoegawa, K., de Jong, P. J., Goldsmith, M. R. & Mita, K., 1 28 2008, : : Genome biology. 9, 1, R21.

研究成果: ジャーナルへの寄稿記事

77 引用 (Scopus)

Adsorption of SIP E. coli onto quartz and its applications in froth flotation

Farahat, M., Hirajima, T., Sasaki, K., Aiba, Y. & Doi, K., 4 1 2008, : : Minerals Engineering. 21, 5, p. 389-395 7 p.

研究成果: ジャーナルへの寄稿記事

33 引用 (Scopus)

A fatal case of necrotizing fasciitis due to bacterial translocation of Klebsiella oxytoca

Oishi, H., Kagawa, Y., Mitsumizo, S., Tashiro, Y., Kobayashi, G., Udo, K., Aoki, S., Takayanagi, M., Nagasawa, Z., Araki, K., Ohza, N., Eguchi, Y. & Nakashima, M., 2 2008, : : Journal of Infection and Chemotherapy. 14, 1, p. 62-65 4 p.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Alteration of gene expression profiles in the brain of Japanese medaka (Oryzias latipes) exposed to KC-400 or PCB126

Nakayama, K., Sei, N., Oshima, Y., Tashiro, K., Shimasaki, Y. & Honjo, T., 3 28 2008, : : Marine Pollution Bulletin. 57, 6-12, p. 460-466 7 p.

研究成果: ジャーナルへの寄稿記事

9 引用 (Scopus)

An essential role for de novo biosynthesis of L-serine in CNS development

Furuya, S., 1 1 2008, : : Asia Pacific Journal of Clinical Nutrition. 17, SUPPL. 1, p. 312-315 4 p.

研究成果: ジャーナルへの寄稿評論記事

24 引用 (Scopus)

A novel epistatic interaction at two loci causing hybrid male sterility in an inter-subspecific cross of rice (Oryza sativa L.)

Kubo, T., Yamagata, Y., Eguchi, M. & Yoshimura, A., 12 1 2008, : : Genes and Genetic Systems. 83, 6, p. 443-453 11 p.

研究成果: ジャーナルへの寄稿記事

36 引用 (Scopus)

A novel maT-type transposable element, BmamaT1, in Bombyx mandarina, homologous to the B. mori mariner-like element Bmmar6

Kawanishi, Y., Takaishi, R., Morimoto, M., Banno, Y., Nho, S. K., Maekawa, H. & Nakajima, Y., 2 1 2008, : : Journal of Insect Biotechnology and Sericology. 77, 1, p. 45-52 8 p.

研究成果: ジャーナルへの寄稿記事

2 引用 (Scopus)

A rapid and efficient strategy to generate antigen-specific human monoclonal antibody by in vitro immunization and the phage display method

Matsumoto, S. E., Yamashita, M., Katakura, Y., Aiba, Y., Tomimatsu, K., Kabayama, S., Teruya, K. & Shirahata, S., 3 20 2008, : : Journal of Immunological Methods. 332, 1-2, p. 2-9 8 p.

研究成果: ジャーナルへの寄稿記事

17 引用 (Scopus)

Bacteriocin detection by liquid chromatography/mass spectrometry for rapid identification

Zendo, T., Nakayama, J., Fujita, K. & Sonomoto, K., 2 1 2008, : : Journal of Applied Microbiology. 104, 2, p. 499-507 9 p.

研究成果: ジャーナルへの寄稿記事

39 引用 (Scopus)

Binding specificity of the lantibiotic-binding immunity protein NukH

Okuda, K. I., Yanagihara, S., Shioya, K., Harada, Y., Nagao, J. I., Aso, Y., Zendo, T., Nakayama, J. & Sonomoto, K., 12 1 2008, : : Applied and environmental microbiology. 74, 24, p. 7613-7619 7 p.

研究成果: ジャーナルへの寄稿記事

8 引用 (Scopus)

Biosynthetic characterization and biochemical features of the third natural nisin variant, nisin Q, produced by Lactococcus lactis 61-14

Yoneyama, F., Fukao, M., Zendo, T., Nakayama, J. & Sonomoto, K., 12 1 2008, : : Journal of Applied Microbiology. 105, 6, p. 1982-1990 9 p.

研究成果: ジャーナルへの寄稿記事

17 引用 (Scopus)

Blind spot of G1/S checkpoint: G1/S checkpoint is invaded by DNA-damage after R-point

Iwamoto, K., Tashima, Y., Hamada, H., Okamoto, M. & Eguchi, Y., 12 1 2008, IASTED International Symposium on Computational Biology and Bioinformatics, CBB 2008. p. 241-246 6 p. (IASTED International Symposium on Computational Biology and Bioinformatics, CBB 2008).

研究成果: 著書/レポートタイプへの貢献会議での発言

Cephalic hedgehog expression is regulated directly by Sox17 in endoderm development of Xenopus laevis

Yagi, Y., Ito, Y., Kuhara, S. & Tashiro, K., 6 1 2008, : : Cytotechnology. 57, 2, p. 151-159 9 p.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Chromosomal localization of silkworm (Bombyx mori) sericin gene 1 and chymotrypsin inhibitor 13 using fluorescence in situ hybridization

Song, F. Z., Chang, P. A., Zhang, P. B., Yi, F. P., Ma, Y. P., Lu, C., Banno, Y. & Fujii, H., 2 1 2008, : : Science in China, Series C: Life Sciences. 51, 2, p. 133-139 7 p.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)

Comparative Characterization of l-Lactic Acid-Producing Thermotolerant Rhizopus Fungi

Kitpreechavanich, V., Maneeboon, T., Kayano, Y. & Sakai, K., 12 1 2008, : : Journal of Bioscience and Bioengineering. 106, 6, p. 541-546 6 p.

研究成果: ジャーナルへの寄稿記事

23 引用 (Scopus)
57 引用 (Scopus)

Complete covalent structure of nisin Q, new natural nisin variant, containing post-translationally modified amino acids

Fukao, M., Obita, T., Yoneyama, F., Kohda, D., Zendo, T., Nakayama, J. & Sonomoto, K., 7 30 2008, : : Bioscience, Biotechnology and Biochemistry. 72, 7, p. 1750-1755 6 p.

研究成果: ジャーナルへの寄稿記事

6 引用 (Scopus)