システム生物工学

研究成果 1979 2020

フィルター
記事
2020
Carboxylation
Pyruvate Dehydrogenase Complex
Synechococcus
Acetyl Coenzyme A
Cloning
2019
2 引用 (Scopus)

A comprehensive reference transcriptome resource for the Iberian ribbed newt Pleurodeles waltl, an emerging model for developmental and regeneration biology

Matsunami, M., Suzuki, M., Haramoto, Y., Fukui, A., Inoue, T., Yamaguchi, K., Uchiyama, I., Mori, K., Tashiro, K., Ito, Y., Takeuchi, T., Suzuki, K. I. T., Agata, K., Shigenobu, S. & Hayashi, T., 1 1 2019, : : DNA Research. 26, 3, p. 217-229 13 p.

研究成果: ジャーナルへの寄稿記事

公開
Pleurodeles
Salamandridae
Developmental Biology
Transcriptome
Regeneration
公開
glutathione dehydrogenase (ascorbate)
Nilaparvata lugens
Glutathione Reductase
Glutathione Transferase
glutathione transferase

Association between Serum β-Alanine and Risk of Dementia

Hata, J., Ohara, T., Katakura, Y., Shimizu, K., Yamashita, S., Yoshida, D., Honda, T., Hirakawa, Y., Shibata, M., Sakata, S., Kitazono, T., Kuhara, S. & Ninomiya, T., 9 1 2019, : : American journal of epidemiology. 188, 9, p. 1637-1645 9 p.

研究成果: ジャーナルへの寄稿記事

Alanine
Dementia
Anserine
Carnosine
Confidence Intervals

BELL1-like homeobox genes regulate inflorescence architecture and meristem maintenance in rice

Ikeda, T., Tanaka, W., Toriba, T., Suzuki, C., Maeno, A., Tsuda, K., Shiroishi, T., Kurata, T., Sakamoto, T., Murai, M., Matsusaka, H., Kumamaru, T. & Hirano, H. Y., 5 1 2019, : : Plant Journal. 98, 3, p. 465-478 14 p.

研究成果: ジャーナルへの寄稿記事

Inflorescence
homeotic genes
Meristem
Homeobox Genes
meristems
1 引用 (Scopus)

Carnosine induces intestinal cells to secrete exosomes that activate neuronal cells

Sugihara, Y., Onoue, S., Tashiro, K., Sato, M., Hasegawa, T. & Katakura, Y., 5 2019, : : PloS one. 14, 5, e0217394.

研究成果: ジャーナルへの寄稿記事

公開
exosomes
Carnosine
Exosomes
carnosine
neurons

Catechol O-methyltransferase homologs in Schizosaccharomyces pombe are response factors to alkaline and salt stress

Tominaga, A., Higuchi, Y., Mori, H., Akai, M., Suyama, A., Yamada, N. & Takegawa, K., 6 18 2019, : : Applied Microbiology and Biotechnology. 103, 12, p. 4881-4887 7 p.

研究成果: ジャーナルへの寄稿記事

Catechol O-Methyltransferase
Schizosaccharomyces
Salts
Microarray Analysis
Oligonucleotide Array Sequence Analysis
1 引用 (Scopus)

Cellulase productivity of Trichoderma reesei mutants developed in Japan varies with varying pH conditions

Hirasawa, H., Shioya, K., Mori, K., Tashiro, K., Aburatani, S., Shida, Y., Kuhara, S. & Ogasawara, W., 9 2019, : : Journal of Bioscience and Bioengineering. 128, 3, p. 264-273 10 p.

研究成果: ジャーナルへの寄稿記事

Trichoderma
Cellulase
Japan
Productivity
Enzymes

Chemo-enzymatic synthesis of p-nitrophenyl β-D-galactofuranosyl disaccharides from Aspergillus sp. fungal-type galactomannan

Ota, R., Okamoto, Y., Vavricka, C. J., Oka, T., Matsunaga, E., Takegawa, K., Kiyota, H. & Izumi, M., 2 1 2019, : : Carbohydrate Research. 473, p. 99-103 5 p.

研究成果: ジャーナルへの寄稿記事

Disaccharides
Aspergillus
Polysaccharides
Glycoconjugates
Cell Wall

Complete genome sequence of enterococcus faecium qu50, a thermophilic lactic acid bacterium capable of metabolizing xylose

Abe, K., Kanesaki, Y., Abdel-Rahman, M. A., Watanabe, S., Zendo, T., Chibazakura, T., Shimizu-Kadota, M., Sonomoto, K. & Yoshikawa, H., 5 23 2019, : : Microbiology Resource Announcements. 8, 21, e0041319.

研究成果: ジャーナルへの寄稿記事

公開
Enterococcus faecium
Xylose
Lactic Acid
Genome
Bacteria
2 引用 (Scopus)

Comprehensive behavioral analysis and quantification of brain free amino acids of C57BL/6J congenic mice carrying the 1473G allele in tryptophan hydroxylase-2

Koshimizu, H., Hirata, N., Takao, K., Toyama, K., Ichinose, T., Furuya, S. & Miyakawa, T., 3 1 2019, : : Neuropsychopharmacology Reports. 39, 1, p. 56-60 5 p.

研究成果: ジャーナルへの寄稿記事

Congenic Mice
Tryptophan Hydroxylase
Serotonin
Alleles
Amino Acids
1 引用 (Scopus)

Continuous cell culture monitoring using a compact microplate reader with a silicone optical technology-based spatial filter

Nakashima, Y., Kounoura, M., Malasuk, C., Nakakubo, K., Watanabe, N., Iwata, S., Morita, K., Oki, Y., Kuhara, S., Tashiro, K. & Nakanishi, Y., 3 1 2019, : : Review of Scientific Instruments. 90, 3, 035106.

研究成果: ジャーナルへの寄稿記事

Continuous cell culture
silicones
readers
Silicones
Cell culture
Lactic acid
Triticum
Lactic Acid
Bacteria
Yeast

Dynamics of microbial populations responsible for biodegradation during the full-scale treatment of palm oil mill effluent

Mohd-Nor, D., Ramli, N., Sharuddin, S. S., Hassan, M. A., Mustapha, N. A., Ariffin, H., Sakai, K., Tashiro, Y., Shirai, Y. & Maeda, T., 1 1 2019, : : Microbes and Environments. 34, 2, p. 121-128 8 p.

研究成果: ジャーナルへの寄稿記事

公開
oil mill effluents
biodegradation
acetic acid
mill
methanogens

Effect of high temperature on starch biosynthetic enzymes and starch structure in japonica rice cultivar ‘Akitakomachi’ (Oryza sativa L.) endosperm and palatability of cooked rice

Kato, K., Suzuki, Y., Hosaka, Y., Takahashi, R., Kodama, I., Sato, K., Kawamoto, T., Kumamaru, T. & Fujita, N., 5 1 2019, : : Journal of Cereal Science. 87, p. 209-214 6 p.

研究成果: ジャーナルへの寄稿記事

Endosperm
palatability
Starch
endosperm
Oryza sativa
1 引用 (Scopus)

Effects of in ovo feeding of L-leucine on amino acids metabolism and heat-shock protein-70, and -90 mRNA expression in heat-exposed chicks

Han, G., Yang, H., Wang, Y., Zhang, R., Tashiro, K., Bungo, T., Furuse, M. & Surchowdhury, V., 3 1 2019, : : Poultry science. 98, 3, p. 1243-1253 11 p.

研究成果: ジャーナルへの寄稿記事

amino acid metabolism
leucine
broiler chickens
chicks
heat

Eukaryotic peptide chain release factor 1 participates in translation termination of specific cysteine-poor prolamines in rice endosperm

Elakhdar, A., Ushijima, T., Fukuda, M., Yamashiro, N., Kawagoe, Y. & Kumamaru, T., 4 1 2019, : : Plant Science. 281, p. 223-231 9 p.

研究成果: ジャーナルへの寄稿記事

Phenylpropanolamine
Endosperm
prolamins
translation (genetics)
endosperm
公開
Delphacidae
Nilaparvata lugens
glutathione transferase
Hemiptera
insecticides

Galactofuranosidase from JHA 19 Streptomyces sp. subcloning and biochemical characterization

Seničar, M., Legentil, L., Ferrières, V., Eliseeva, S. V., Petoud, S., Takegawa, K., Lafite, P. & Daniellou, R., 7 1 2019, : : Carbohydrate Research. 480, p. 35-41 7 p.

研究成果: ジャーナルへの寄稿記事

Streptomyces
Hydrolases
Enzymes
Substrate Specificity
Metabolism

Identification and characterization of superoxide dismutase in silkworm seminal fluid

Nagaoka, S. & Yamamoto, K., 1 1 2019, : : Journal of Insect Biotechnology and Sericology. 88, 2, p. 39-47 9 p.

研究成果: ジャーナルへの寄稿記事

Bombyx
silkworms
Antioxidants
Superoxide Dismutase
Spermatozoa

Identification and expression analysis of the replication factor C protein in the silkworm, Bombyx mori

Yamamoto, K., Haque, M. R. & Saruta, F., 1 1 2019, : : Journal of Insect Biotechnology and Sericology. 88, 1, p. 17-20 4 p.

研究成果: ジャーナルへの寄稿記事

Replication Protein C
Bombyx
DNA replication
Bombyx mori
silkworms
1 引用 (Scopus)
Enterobacter
Bombyx
Proteins
Genes
Plasmids
1 引用 (Scopus)
Morus
Bombyx
nitrogen metabolism
uric acid
silkworms

Identification of polyphenols that repair the ultraviolet-B-induced DNA damage via SIRT1-dependent XPC/XPA activation

Chong, Z., Matsuo, H., Onoue, S., Yamamoto, H., Ito, H. & Katakura, Y., 3 1 2019, : : Journal of Functional Foods. 54, p. 119-127 9 p.

研究成果: ジャーナルへの寄稿記事

Polyphenols
DNA damage
DNA Damage
ultraviolet radiation
polyphenols

Isolation and characterization of spontaneous phage-resistant mutants of Lactobacillus paracasei

Sunthornthummas, S., Doi, K., Rangsiruji, A., Krajangsung, S., Sarawaneeyaruk, S. & Pringsulaka, O., 5 1 2019, : : Food Control. 99, p. 114-123 10 p.

研究成果: ジャーナルへの寄稿記事

Lactobacillus paracasei
bacteriophages
Bacteriophages
mutants
chemical derivatives

Koji glycosylceramide commonly contained in Japanese traditional fermented foods alters cholesterol metabolism in obese mice

Hamajima, H., Tanaka, M., Miyagawa, M., Sakamoto, M., Nakamura, T., Yanagita, T., Nishimukai, M., Mitsutake, S., Nakayama, J., Nagao, K. & Kitagaki, H., 1 1 2019, : : Bioscience, Biotechnology and Biochemistry. 83, 8, p. 1514-1522 9 p.

研究成果: ジャーナルへの寄稿記事

Obese Mice
Metabolism
Cholesterol
Food
Liver

L-Leucine increases the daily body temperature and affords thermotolerance in broiler chicks

Han, G., Yang, H., Wang, Y., Haraguchi, S., Miyazaki, T., Bungo, T., Tashiro, K., Furuse, M. & Chowdhury, V. S., 6 2019, : : Asian-Australasian Journal of Animal Sciences. 32, 6, p. 842-848 7 p.

研究成果: ジャーナルへの寄稿記事

公開
Body Temperature
heat tolerance
Leucine
body temperature
leucine

Mode and structure of the bacterial community on human scalp hair

Watanabe, K., Nishi, E., Tashiro, Y. & Sakai, K., 1 1 2019, : : Microbes and Environments. 34, 3, p. 252-259 8 p.

研究成果: ジャーナルへの寄稿記事

公開
hair
bacterial communities
hairs
trichomes
shaft
1 引用 (Scopus)

Modification of carbon metabolism in Synechococcus elongatus PCC 7942 by cyanophage-derived sigma factors for bioproduction improvement

Sawa, N., Tatsuke, T., Ogawa, A., Hirokawa, Y., Osanai, T. & Hanai, T., 2 1 2019, : : Journal of Bioscience and Bioengineering. 127, 2, p. 256-264 9 p.

研究成果: ジャーナルへの寄稿記事

Synechococcus
Sigma Factor
Metabolism
Bacteriophages
Carbon

Molecular characterization and expression analysis of a phosphoserine aminotransferase involving l-serine synthesis from silkworm, Bombyx mori

Haque, M. R., Hirowatari, A., Koyanagi, A., Ichinose, T., Abiru, M., Mohri, S., Furuya, S. & Yamamoto, K., 6 1 2019, : : Archives of insect biochemistry and physiology. 101, 2, e21553.

研究成果: ジャーナルへの寄稿記事

phosphoserine aminotransferase
silk glands
Bombyx
Silk
transaminases
1 引用 (Scopus)

Molecular structure of a 5,10-methylenetetrahydrofolate dehydrogenase from the silkworm Bombyx mori

Haque, M. R., Higashiura, A., Nakagawa, A., Hirowatari, A., Furuya, S. & Yamamoto, K., 4 2019, : : FEBS Open Bio. 9, 4, p. 618-628 11 p.

研究成果: ジャーナルへの寄稿記事

公開
Methylenetetrahydrofolate Dehydrogenase (NADP)
Bombyx
Molecular Structure
Morus
Molecular structure
1 引用 (Scopus)

Plasmid-encoded glycosyltransferase operon is responsible for exopolysaccharide production, cell aggregation, and bile resistance in a probiotic strain, Lactobacillus brevis KB290

Fukao, M., Zendo, T., Inoue, T., Nakayama, J., Suzuki, S., Fukaya, T., Yajima, N. & Sonomoto, K., 10 2019, : : Journal of Bioscience and Bioengineering. 128, 4, p. 391-397 7 p.

研究成果: ジャーナルへの寄稿記事

Lactobacillus brevis
Glycosyltransferases
Cell Aggregation
Probiotics
Operon
3 引用 (Scopus)

Protective effect of lactobacillus reuteri KUB-AC5 against salmonella enteritidis challenge in chickens

Nakphaichit, M., Sobanbua, S., Siemuang, S., Vongsangnak, W., Nakayama, J. & Nitisinprasert, S., 1 1 2019, : : Beneficial Microbes. 10, 1, p. 43-54 12 p.

研究成果: ジャーナルへの寄稿記事

Lactobacillus reuteri
Salmonella enteritidis
Salmonella
Chickens
Salmonella Infections

Relation between cell-bound exopolysaccharide production via plasmid-encoded genes and rugose colony morphology in the probiotic Lactobacillus brevis KB290

Fukao, M., Zendo, T., Inoue, T., Fuke, N., Moriuchi, T., Yamane, Y., Nakayama, J., Sonomoto, K. & Fukaya, T., 1 1 2019, (受理済み/印刷中) : : Animal Science Journal.

研究成果: ジャーナルへの寄稿記事

Lactobacillus brevis
exopolysaccharides
Probiotics
probiotics
plasmids
1 引用 (Scopus)

Selective suppression of cell growth and programmed cell death-ligand 1 expression in HT1080 fibrosarcoma cells by low molecular weight fucoidan extract

Teruya, K., Kusumoto, Y., Eto, H., Nakamichi, N. & Shirahata, S., 7 19 2019, : : Marine Drugs. 17, 7, 421.

研究成果: ジャーナルへの寄稿記事

公開
Fibrosarcoma
Cell Death
Molecular Weight
Ligands
Growth
1 引用 (Scopus)

Semi-hydrolysate of paper pulp without pretreatment enables a consolidated fermentation system with in situ product recovery for the production of butanol

Zhao, T., Yasuda, K., Tashiro, Y., Darmayanti, R. F., Sakai, K. & Sonomoto, K., 4 1 2019, : : Bioresource Technology. 278, p. 57-65 9 p.

研究成果: ジャーナルへの寄稿記事

Butanols
Butenes
Fermentation
fermentation
Pulp
Glycine Hydroxymethyltransferase
glycine hydroxymethyltransferase
Bombyx
Bombyx mori
silkworms

Structural basis for the specific cleavage of core-fucosylated N-glycans by endo-N-acetylglucosaminidase from the fungus Cordyceps militaris

Seki, H., Huang, Y., Arakawa, T., Yamada, C., Kinoshita, T., Iwamoto, S., Higuchi, Y., Takegawa, K. & Fushinobu, S., 1 1 2019, : : Journal of Biological Chemistry. 294, 45, p. 17143-17154 12 p.

研究成果: ジャーナルへの寄稿記事

Cordyceps
Acetylglucosaminidase
Fucose
Fungi
Polysaccharides
1 引用 (Scopus)

Synthetic microbial consortium with specific roles designated by genetic circuits for cooperative chemical production

Honjo, H., Iwasaki, K., Soma, Y., Tsuruno, K., Hamada, H. & Hanai, T., 9 1 2019, : : Metabolic Engineering. 55, p. 268-275 8 p.

研究成果: ジャーナルへの寄稿記事

Microbial Consortia
Enzymes
Networks (circuits)
Microorganisms
Metabolic Networks and Pathways

The association between gut microbiota development and maturation of intestinal bile acid metabolism in the first 3 y of healthy Japanese infants

Tanaka, M., Sanefuji, M., Morokuma, S., Yoden, M., Momoda, R., Sonomoto, K., Ogawa, M., Kato, K. & Nakayama, J., 1 1 2019, (受理済み/印刷中) : : Gut Microbes.

研究成果: ジャーナルへの寄稿記事

Bile Acids and Salts
Microbiota
Lactation
Ruminococcus
Lithocholic Acid

The gelatinase biosynthesis-activating pheromone binds and stabilises the FsrB membrane protein in Enterococcus faecalis quorum sensing

Littlewood, S., Tattersall, H., Hughes, C. S., Hussain, R., Ma, P., Harding, S. E., Nakayama, J. & Phillips-Jones, M. K., 1 1 2019, (受理済み/印刷中) : : FEBS Letters.

研究成果: ジャーナルへの寄稿記事

公開
Quorum Sensing
Membrane Proteins
Hot Temperature
gelatinase biosynthesis-activating pheromone
Denaturation

The Role of RNA-Binding Protein OsTudor-SN in Post-Transcriptional Regulation of Seed Storage Proteins and Endosperm Development

Chou, H. L., Tian, L., Fukuda, M., Kumamaru, T. & Okita, T. W., 10 1 2019, : : Plant and Cell Physiology. 60, 10, p. 2193-2205 13 p.

研究成果: ジャーナルへの寄稿記事

Seed Storage Proteins
Endosperm
RNA-binding proteins
seed storage proteins
RNA-Binding Proteins

Ursolic Acid Isolated from the Leaves of Loquat (Eriobotrya japonica) Inhibited Osteoclast Differentiation through Targeting Exportin 5

Tan, H., Zhao, C., Zhu, Q., Katakura, Y., Tanaka, H., Ohnuki, K. & Shimizu, K., 3 27 2019, : : Journal of Agricultural and Food Chemistry. 67, 12, p. 3333-3340 8 p.

研究成果: ジャーナルへの寄稿記事

Eriobotrya
Karyopherins
Eriobotrya japonica
ursolic acid
osteoclasts
2018

A conserved motif is essential for the correct assembly of proglutelins and for their export from the endoplasmic reticulum in rice endosperm

Tian, L., Xing, Y., Fukuda, M., Li, R., Kumamaru, T., Qian, D., Dong, X. & Qu, L. Q., 10 12 2018, : : Journal of Experimental Botany. 69, 21, p. 5029-5043 15 p.

研究成果: ジャーナルへの寄稿記事

Endosperm
Endoplasmic Reticulum
endoplasmic reticulum
endosperm
rice
1 引用 (Scopus)

Alcaligenaceae and Chromatiaceae as reliable bioindicators present in palm oil mill effluent final discharge treated by different biotreatment processes

Mohd-Nor, D., Ramli, N., Sharuddin, S. S., Hassan, M. A., Mustapha, N. A., Amran, A., Sakai, K., Shirai, Y. & Maeda, T., 12 1 2018, : : Ecological Indicators. 95, p. 468-473 6 p.

研究成果: ジャーナルへの寄稿記事

Alcaligenaceae
oil mill effluents
Chromatiaceae
bioindicator
mill

Amycolatopsis silviterrae sp. Nov., isolated from forest soil

Jamjan, W., Suriyachadkun, C., Tanasupawat, S., Sakai, K., Tashiro, Y., Okugawa, Y. & Tongpim, S., 5 1 2018, : : International Journal of Systematic and Evolutionary Microbiology. 68, 5, p. 1455-1460 6 p., 002687.

研究成果: ジャーナルへの寄稿記事

Amycolatopsis
forest soils
forest soil
Soil
phospholipid
1 引用 (Scopus)

Analysis of ambient pH stress response mediated by iron and copper intake in Schizosaccharomyces pombe

Higuchi, Y., Mori, H., Kubota, T. & Takegawa, K., 1 1 2018, : : Journal of Bioscience and Bioengineering. 125, 1, p. 92-96 5 p.

研究成果: ジャーナルへの寄稿記事

Schizosaccharomyces
Copper
Iron
Genes
Yeast
1 引用 (Scopus)

Analysis of differentially expressed genes and the promoters in bovine endometrium throughout estrus cycle and early pregnancy

Musavi, S. A. A., Yamashita, S., Fujihara, T., Masaka, H., Islam, M. R., Kim, S., Gotoh, T., Kawahara, M., Tashiro, K. & Yamauchi, N., 11 2018, : : Animal Science Journal. 89, 11, p. 1609-1621 13 p.

研究成果: ジャーナルへの寄稿記事

endometrium
Estrus
Endometrium
estrous cycle
promoter regions
13 引用 (Scopus)

An Exploratory Study on the Anti-inflammatory Effects of Fucoidan in Relation to Quality of Life in Advanced Cancer Patients

Takahashi, H., Kawaguchi, M., Kitamura, K., Narumiya, S., Kawamura, M., Tengan, I., Nishimoto, S., Hanamure, Y., Majima, Y., Tsubura, S., Teruya, K. & Shirahata, S., 6 1 2018, : : Integrative Cancer Therapies. 17, 2, p. 282-291 10 p.

研究成果: ジャーナルへの寄稿記事

Anti-Inflammatory Agents
Quality of Life
Neoplasms
Interleukin-1
Eating
6 引用 (Scopus)

Anserine/carnosine supplementation preserves blood flow in the prefrontal brain of elderly people carrying APOE e4

Ding, Q., Tanigawa, K., Kaneko, J., Totsuka, M., Katakura, Y., Imabayashi, E., Matsuda, H. & Hisatsune, T., 6 1 2018, : : Aging and Disease. 9, 3, p. 334-345 12 p.

研究成果: ジャーナルへの寄稿記事

Anserine
Carnosine
Brain
Wechsler Scales
Diffusion Tensor Imaging