Pureに変更を加えた場合、すぐここに表示されます。

研究成果 1987 2019

2001
62 引用 (Scopus)

Exploring the protein interactome using comprehensive two-hybrid projects.

Ito, T., Chiba, T. & Yoshida, M., 1 1 2001, : : Trends in biotechnology. 19, 10 Suppl

研究成果: ジャーナルへの寄稿評論記事

Proteins
103 引用 (Scopus)

Human homologues of the Caenorhabditis elegans cell polarity protein PAR6 as an adaptor that links the small GTPases Rac and Cdc42 to atypical protein kinase C

Noda, Y., Takeya, R., Ohno, S., Naito, S., Ito, T. & Sumimoto, H., 4 17 2001, : : Genes to Cells. 6, 2, p. 107-119 13 p.

研究成果: ジャーナルへの寄稿記事

Cell Polarity
Monomeric GTP-Binding Proteins
Caenorhabditis elegans
GTP Phosphohydrolases
Proteins
5 引用 (Scopus)

Multiplex polymerase chain reaction (PCR) with color-tagged module-shuffling primers for comparing gene expression levels in various cells

Uematsu, C., Nishida, J., Okano, K., Miura, F., Ito, T., Sakaki, Y. & Kambara, H., 8 15 2001, : : Nucleic acids research. 29, 16, 1 p.

研究成果: ジャーナルへの寄稿記事

Multiplex Polymerase Chain Reaction
Color
Gene Expression
Electrophoresis
Gels
124 引用 (Scopus)

Novel modular domain PB1 recognizes pc motif to mediate functional protein-protein interactions

Ito, T., Matsui, Y., Ago, T., Ota, K. & Sumimoto, H., 8 1 2001, : : EMBO Journal. 20, 15, p. 3938-3946 9 p.

研究成果: ジャーナルへの寄稿記事

Proteins
Saccharomycetales
Fungal Proteins
NADPH Oxidase
Phagocytes
139 引用 (Scopus)

Solution structure of the PX domain, a target of the SH3 domain

Hiroaki, H., Ago, T., Ito, T., Sumimoto, H. & Kohda, D., 2001, : : Nature Structural Biology. 8, 6, p. 526-530 5 p.

研究成果: ジャーナルへの寄稿記事

src Homology Domains
Proline
Proteins
NADPH Oxidase
Phagocytes
57 引用 (Scopus)

Structure and ligand recognition of the PB1 domain: A novel protein module binding to the PC motif

Terasawa, H., Noda, Y., Ito, T., Hatanaka, H., Ichikawa, S., Ogura, K., Sumimoto, H. & Inagaki, F., 8 1 2001, : : EMBO Journal. 20, 15, p. 3947-3956 10 p.

研究成果: ジャーナルへの寄稿記事

Protein Binding
Cell Polarity
Ligands
Proteins
Nuclear magnetic resonance
85 引用 (Scopus)

The PX domain as a novel phosphoinositide-binding module

Ago, T., Takeya, R., Hiroaki, H., Kuribayashi, F., Ito, T., Kohda, D. & Sumimoto, H., 9 28 2001, : : Biochemical and Biophysical Research Communications. 287, 3, p. 733-738 6 p.

研究成果: ジャーナルへの寄稿記事

Phosphatidylinositols
Endosomes
Phagocytes
Oxidoreductases
Proteins
2002

Erratum: Extraction of knowledge on protein-protein interaction by association rule discovery (Bioinformatics (2002) vol. 18 (705-714))

Oyama, T., Kitano, K., Satou, K. & Ito, T., 8 1 2002, : : Bioinformatics. 18, 8, 1 p.

研究成果: ジャーナルへの寄稿コメント/討論

Protein-protein Interaction
Association Rules
Bioinformatics
Knowledge
68 引用 (Scopus)

Extraction of knowledge on protein-protein interaction by association rule discovery

Oyama, T., Kitano, K., Satou, K. & Ito, T., 1 1 2002, : : Bioinformatics. 18, 5, p. 705-714 10 p.

研究成果: ジャーナルへの寄稿記事

Association rules
Protein-protein Interaction
Association Rules
Proteins
Data Mining
52 引用 (Scopus)

OPR, PC and AID: All in the PB1 family

Ponting, C. P., Ito, T., Moscat, J., Diaz-Meco, M. T., Inagaki, F. & Sumimoto, H., 1 1 2002, : : Trends in Biochemical Sciences. 27, 1, 1 p.

研究成果: ジャーナルへの寄稿レター

Proto-Oncogene Proteins
Saccharomyces cerevisiae Proteins
Guanine Nucleotide Exchange Factors
Cell Cycle Proteins
Viral Proteins
96 引用 (Scopus)

Roles for the two-hybrid system in exploration of the yeast protein interactome.

Ito, T., Ota, K., Kubota, H., Yamaguchi, Y., Chiba, T., Sakuraba, K. & Yoshida, M., 8 2002, : : Molecular & cellular proteomics : MCP. 1, 8, p. 561-566 6 p.

研究成果: ジャーナルへの寄稿評論記事

Fungal Proteins
Hybrid systems
Two-Hybrid System Techniques
Proteins
Yeast
118 引用 (Scopus)

The adaptor protein p40 phox as a positive regulator of the superoxide-producing phagocyte oxidase

Kuribayashi, F., Nunoi, H., Wakamatsu, K., Tsunawaki, S., Sato, K., Ito, T. & Sumimoto, H., 12 2 2002, : : EMBO Journal. 21, 23, p. 6312-6320 9 p.

研究成果: ジャーナルへの寄稿記事

Phagocytes
Superoxides
Oxidoreductases
Proteins
Membranes
2003
100 引用 (Scopus)

A functional single-nucleotide polymorphism in the human cytidine deaminase gene contributing to ara-C sensitivity

Yue, L., Saikawa, Y., Ota, K., Tanaka, M., Nishimura, R., Uehara, T., Maeba, H., Ito, T., Sasaki, T. & Koizumi, S., 1 1 2003, : : Pharmacogenetics. 13, 1, p. 29-38 10 p.

研究成果: ジャーナルへの寄稿記事

Cytidine Deaminase
Cytarabine
Single Nucleotide Polymorphism
Genes
Yeasts
22 引用 (Scopus)

Identification of a five-pass transmembrane protein family localizing in the Golgi apparatus and the ER

Shakoori, A., Fujii, G., Yoshimura, S. I., Kitamura, M., Nakayama, K., Ito, T., Ohno, H. & Nakamura, N., 12 19 2003, : : Biochemical and Biophysical Research Communications. 312, 3, p. 850-857 8 p.

研究成果: ジャーナルへの寄稿記事

Golgi Apparatus
Yeast
Proteins
Yeasts
Tissue
66 引用 (Scopus)

Molecular Recognition in Dimerization between PB1 Domains

Noda, Y., Kohjima, M., Izaki, T., Ota, K., Yoshinaga, S., Inagaki, F., Ito, T. & Sumimoto, H., 10 31 2003, : : Journal of Biological Chemistry. 278, 44, p. 43516-43524 9 p.

研究成果: ジャーナルへの寄稿記事

Molecular recognition
Dimerization
Lysine
Proteins
Coulomb interactions
166 引用 (Scopus)
src Homology Domains
NADPH Oxidase
Phagocytes
Phosphatidylinositols
Oxidoreductases
80 引用 (Scopus)

Rapamycin-induced translational derepression of GCN4 mRNA involves a novel mechanism for activation of the eIF2α kinase GCN2

Kubota, H., Obata, T., Ota, K., Sasaki, T. & Ito, T., 6 6 2003, : : Journal of Biological Chemistry. 278, 23, p. 20457-20460 4 p.

研究成果: ジャーナルへの寄稿記事

Sirolimus
Transfer RNA
Phosphotransferases
Chemical activation
Messenger RNA
30 引用 (Scopus)

The PB1 domain and the PC motif-containing region are structurally similar protein binding modules

Yoshinaga, S., Kohjima, M., Ogura, K., Yokochi, M., Takeya, R., Ito, T., Sumimoto, H. & Inagaki, F., 10 1 2003, : : EMBO Journal. 22, 19, p. 4888-4897 10 p.

研究成果: ジャーナルへの寄稿記事

Ubiquitin
Protein Binding
Amino Acid Motifs
Saccharomycetales
Static Electricity
2004
134 引用 (Scopus)

A comprehensive analysis of allelic methylation status of CpG islands on human chromosome 21q

Yamada, Y., Watanabe, H., Miura, F., Soejima, H., Uchiyama, M., Iwasaka, T., Mukai, T., Sakaki, Y. & Ito, T., 2 1 2004, : : Genome Research. 14, 2, p. 247-266 20 p.

研究成果: ジャーナルへの寄稿記事

CpG Islands
Human Chromosomes
Methylation
Alleles
X Chromosome
21 引用 (Scopus)

Analysis of gene network regulating yeast multidrug resistance by artificial activation of transcription factors: Involvement of Pdr3 in salt tolerance

Onda, M., Ota, K., Chiba, T., Sakaki, Y. & Ito, T., 5 12 2004, : : Gene. 332, 1-2, p. 51-59 9 p.

研究成果: ジャーナルへの寄稿記事

Salt-Tolerance
Gene Regulatory Networks
Multiple Drug Resistance
Transcription Factors
Yeasts
9 引用 (Scopus)

An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors

Okamura, K., Yamada, Y., Sakaki, Y. & Ito, T., 12 1 2004, : : DNA Research. 11, 6, p. 381-390 10 p.

研究成果: ジャーナルへの寄稿記事

Genomic Imprinting
Genes
Genomic Segmental Duplications
Chromosomes, Human, Pair 18
Intergenic DNA

An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors.

Okamura, K., Sakaki, Y. & Ito, T., 12 2004, : : DNA Research. 11, 6, p. 381-390

研究成果: ジャーナルへの寄稿記事

7 引用 (Scopus)

A yeast one-hybrid system to detect methylation-dependent DNA-protein interactions

Feng, S. Y., Ota, K., Yamada, Y., Sawabu, N. & Ito, T., 1 23 2004, : : Biochemical and Biophysical Research Communications. 313, 4, p. 922-925 4 p.

研究成果: ジャーナルへの寄稿記事

Methylation
DNA Methylation
Hybrid systems
Yeast
Yeasts
81 引用 (Scopus)

Barrier proteins remodel and modify chromatin to restrict silenced domains.

Oki, M., Valenzuela, L., Chiba, T., Ito, T. & Kamakaka, R. T., 3 2004, : : Molecular and Cellular Biology. 24, 5, p. 1956-1967

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)

Mass spectrometry-based proteomics for quantitative description of cellular events

Kito, K. & Ito, T., 12 1 2004, : : Current Genomics. 5, 8, p. 629-635 7 p.

研究成果: ジャーナルへの寄稿評論記事

Proteomics
Mass Spectrometry
Proteins
Isotope Labeling
Saccharomycetales
24 引用 (Scopus)

Scaffold protein JSAP1 is transported to growth cones of neurites independent of JNK signaling pathways in PC12h cells

Sato, S., Ito, M., Ito, T. & Yoshioka, K., 3 31 2004, : : Gene. 329, 1-2, p. 51-60 10 p.

研究成果: ジャーナルへの寄稿記事

Growth Cones
JNK Mitogen-Activated Protein Kinases
Neurites
Kinesin
Proteins
12 引用 (Scopus)

SKIP modifies gene expression by affecting both transcription and splicing

Nagai, K., Yamaguchi, T., Takami, T., Kawasumi, A., Aizawa, M., Masuda, N., Shimizu, M., Tominaga, S., Ito, T., Tsukamoto, T. & Osumi, T., 4 2 2004, : : Biochemical and Biophysical Research Communications. 316, 2, p. 512-517 6 p.

研究成果: ジャーナルへの寄稿記事

RNA Splice Sites
Transcription
Reporter Genes
Gene expression
Introns
32 引用 (Scopus)

Transcriptomic and proteomic analysis of a 14-3-3 gene-deficient yeast

Ichimura, T., Kubota, H., Goma, T., Mizushima, N., Ohsumi, Y., Iwago, M., Kakiuchi, K., Shekhar, H. U., Shinkawa, T., Taoka, M., Ito, T. & Isobe, T., 5 25 2004, : : Biochemistry. 43, 20, p. 6149-6158 10 p.

研究成果: ジャーナルへの寄稿記事

Proteomics
Yeast
Genes
Yeasts
Saccharomyces cerevisiae
2005
20 引用 (Scopus)

A novel strategy to design highly specific PCR primers based on the stability and uniqueness of 3′-end subsequences

Miura, F., Uematsu, C., Sakaki, Y. & Ito, T., 12 1 2005, : : Bioinformatics. 21, 24, p. 4363-4370 8 p.

研究成果: ジャーナルへの寄稿記事

Subsequence
Specificity
Uniqueness
Polymerase Chain Reaction
CDNA
15 引用 (Scopus)

Comparative genomics approach toward critical determinants for the imprinting of an evolutionarily conserved gene Impact

Okamura, K., Sakaki, Y. & Ito, T., 4 15 2005, : : Biochemical and Biophysical Research Communications. 329, 3, p. 824-830 7 p.

研究成果: ジャーナルへの寄稿記事

Tandem Repeat Sequences
Genomics
Mammals
Rodentia
Genes
17 引用 (Scopus)

The yeast eIF4E-associated protein Eap1p attenuates GCN4 translation upon TOR-inactivation

Matsuo, R., Kubota, H., Obata, T., Kito, K., Ota, K., Kitazono, T., Ibayashi, S., Sasaki, T., Iida, M. & Ito, T., 4 25 2005, : : FEBS Letters. 579, 11, p. 2433-2438 6 p.

研究成果: ジャーナルへの寄稿記事

Sirolimus
Yeast
Yeasts
Proteins
Amino Acids
2006
9 引用 (Scopus)

A comprehensive analysis of allelic methylation status of CpG islands on human chromosome 11q: Comparison with chromosome 21q

Yamada, Y., Shirakawa, T., Taylor, T. D., Okamura, K., Soejima, H., Uchiyama, M., Iwasaka, T., Mukai, T., Muramoto, K. I., Sakaki, Y. & Ito, T., 8 1 2006, : : DNA Sequence - Journal of DNA Sequencing and Mapping. 17, 4, p. 300-306 7 p.

研究成果: ジャーナルへの寄稿記事

CpG Islands
Methylation
Human Chromosomes
Chromosomes
Tandem Repeat Sequences
171 引用 (Scopus)

A large-scale full-length cDNA analysis to explore the budding yeast transcriptome

Miura, F., Kawaguchi, N., Sese, J., Toyoda, A., Hattori, M., Morishita, S. & Ito, T., 11 21 2006, : : Proceedings of the National Academy of Sciences of the United States of America. 103, 47, p. 17846-17851 6 p.

研究成果: ジャーナルへの寄稿記事

Saccharomycetales
Transcription Initiation Site
Transcriptome
Open Reading Frames
Complementary DNA
20 引用 (Scopus)

Diverse DNA methylation statuses at alternative promoters of human genes in various tissues

Cheong, J., Yamada, Y., Yamashita, R., Irie, T., Kanai, A., Wakaguri, H., Nakai, K., Ito, T., Saito, I., Sugano, S. & Suzuki, Y., 11 16 2006, : : DNA Research. 13, 4, p. 155-167 13 p.

研究成果: ジャーナルへの寄稿記事

DNA Methylation
CpG Islands
Genes
Methylation
Alleles
17 引用 (Scopus)

Lessons from comparative analysis of species-specific imprinted genes

Okamura, K. & Ito, T., 3 1 2006, : : Cytogenetic and Genome Research. 113, 1-4, p. 159-164 6 p.

研究成果: ジャーナルへの寄稿記事

Genomic Imprinting
Mammals
Genes
Species Specificity
Marsupialia
69 引用 (Scopus)

Transcriptional activators in yeast

Titz, B., Thomas, S., Rajagopala, S. V., Chiba, T., Ito, T. & Uetz, P., 3 20 2006, : : Nucleic acids research. 34, 3, p. 955-967 13 p.

研究成果: ジャーナルへの寄稿記事

Transcriptional Activation
Helix-Loop-Helix Motifs
Yeasts
Fungal Proteins
Asparagine
2007
27 引用 (Scopus)
Pheromones
Proline
Yeast
Substitution reactions
Yeasts
67 引用 (Scopus)

A synthetic protein approach toward accurate mass spectrometric quantification of component stoichiometry of multiprotein complexes

Kito, K., Ota, K., Fujita, T. & Ito, T., 2 1 2007, : : Journal of Proteome Research. 6, 2, p. 792-800 9 p.

研究成果: ジャーナルへの寄稿記事

Multiprotein Complexes
Stoichiometry
Peptides
Proteins
Eukaryotic Initiation Factor-2B
3 引用 (Scopus)

High-throughput fluorescence labelling of full-length cDNA products based on a reconstituted translation system

Kawahashi, Y., Doi, N., Oishi, Y., Tsuda, C., Takashima, H., Baba, T., Mori, H., Ito, T. & Yanagawa, H., 1 1 2007, : : Journal of biochemistry. 141, 1, p. 19-24 6 p.

研究成果: ジャーナルへの寄稿記事

Labeling
Complementary DNA
Fluorescence
Throughput
Proteins

Methods for protein-protein interaction analysis

Kito, K. & Ito, T., 12 1 2007, Introduction to Systems Biology. Humana Press, p. 160-182 23 p.

研究成果: 著書/レポートタイプへの貢献

Proteins
Mass Spectrometry
Mass spectrometry
Protein Interaction Maps
Biological Phenomena
56 引用 (Scopus)

Proteomic analysis of in vivo 14-3-3 interactions in the yeast Saccharomyces cerevisiae

Kakiuchi, K., Yamauchi, Y., Taoka, M., Iwago, M., Fujita, T., Ito, T., Song, S. Y., Sakai, A., Isobe, T. & Ichimura, T., 7 3 2007, : : Biochemistry. 46, 26, p. 7781-7792 12 p.

研究成果: ジャーナルへの寄稿記事

Cell signaling
Proteomics
Yeast
Saccharomyces cerevisiae
Chitin
9 引用 (Scopus)

Regulation of N-cadherin-based cell-cell interaction by JSAP1 scaffold in PC12h cells

Bayarsaikhan, M., Takino, T., Gantulga, D., Sato, H., Ito, T. & Yoshioka, K., 2 9 2007, : : Biochemical and Biophysical Research Communications. 353, 2, p. 357-362 6 p.

研究成果: ジャーナルへの寄稿記事

Cadherins
Scaffolds
Cell Communication
Nerve Growth Factor
Cells
94 引用 (Scopus)
Protein Interaction Domains and Motifs
Amoeba
Fungi
Animals
NADPH Oxidase
2008
49 引用 (Scopus)

Absolute quantification of the budding yeast transcriptome by means of competitive PCR between genomic and complementary DNAs

Miura, F., Kawaguchi, N., Yoshida, M., Uematsu, C., Kito, K., Sakaki, Y. & Ito, T., 11 29 2008, : : BMC Genomics. 9, 574.

研究成果: ジャーナルへの寄稿記事

Saccharomycetales
Transcriptome
Complementary DNA
Polymerase Chain Reaction
Messenger RNA
10 引用 (Scopus)

A parallel affinity purification method for selective isolation of polyubiquitinated proteins

Ota, K., Kito, K., Iemura, S. I., Natsume, T. & Ito, T., 8 1 2008, : : Proteomics. 8, 15, p. 3004-3007 4 p.

研究成果: ジャーナルへの寄稿記事

Ubiquitinated Proteins
Purification
Ubiquitin
Bearings (structural)
Ubiquitins
20 引用 (Scopus)

A proteomic screen reveals the mitochondrial outer membrane protein Mdm34p as an essential target of the F-box protein Mdm30p

Ota, K., Kito, K., Okada, S. & Ito, T., 12 1 2008, : : Genes to Cells. 13, 10, p. 1075-1085 11 p.

研究成果: ジャーナルへの寄稿記事

F-Box Proteins
Ubiquitinated Proteins
Proteomics
Membrane Proteins
Ubiquitination
13 引用 (Scopus)

Discrimination between stable and dynamic components of protein complexes by means of quantitative proteomics

Kito, K., Kawaguchi, N., Okada, S. & Ito, T., 6 1 2008, : : Proteomics. 8, 12, p. 2366-2370 5 p.

研究成果: ジャーナルへの寄稿記事

Proteomics
Cyclins
Fungal Proteins
Isotopes
Purification
69 引用 (Scopus)

Mass spectrometry-based approaches toward absolute quantitative proteomics

Kito, K. & Ito, T., 6 1 2008, : : Current Genomics. 9, 4, p. 263-274 12 p.

研究成果: ジャーナルへの寄稿評論記事

Proteome
Proteomics
Mass Spectrometry
Isotope Labeling
Peptides
5 引用 (Scopus)

Unexpected complexity of the budding yeast transcriptome

Ito, T., Miura, F. & Onda, M., 12 1 2008, : : IUBMB Life. 60, 12, p. 775-781 7 p.

研究成果: ジャーナルへの寄稿評論記事

Saccharomycetales
Transcriptome
Yeast
Genes
Genome
2009
26 引用 (Scopus)

Circular permutation of ligand-binding module improves dynamic range of genetically encoded FRET-based nanosensor

Okada, S., Ota, K. & Ito, T., 12 1 2009, : : Protein Science. 18, 12, p. 2518-2527 10 p.

研究成果: ジャーナルへの寄稿記事

Periplasmic Binding Proteins
Nanosensors
Fluorescence Resonance Energy Transfer
Ligands
Proteins