• 12759 引用
  • 47 h指数
1989 …2020

Research output per year

Pureに変更を加えた場合、すぐここに表示されます。

研究成果

  • 12759 引用
  • 47 h指数
  • 223 記事
  • 12 評論記事
  • 10 コメント/討論
  • 1 レター
2017

Identification of Shiga toxin-producing (STEC) and enteropathogenic (EPEC) Escherichia coli in diarrhoeic calves and comparative genomics of O5 bovine and human STEC

Fakih, I., Thiry, D., Duprez, J. N., Saulmont, M., Iguchi, A., Piérard, D., Jouant, L., Daube, G., Ogura, Y., Hayashi, T., Taminiau, B. & Mainil, J. G., 4 2017, : : Veterinary Microbiology. 202, p. 16-22 7 p.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)

Isolation of six novel 7-oxo- or urso-type secondary bile acid-producing bacteria from rat cecal contents

Tawthep, S., Fukiya, S., Lee, J. Y., Hagio, M., Ogura, Y., Hayashi, T. & Yokota, A., 11 2017, : : Journal of Bioscience and Bioengineering. 124, 5, p. 514-522 9 p.

研究成果: ジャーナルへの寄稿記事

6 引用 (Scopus)

Population structure of escherichia coli o26: H11 with recent and repeated stx2 acquisition in multiple lineages

Ogura, Y., Gotoh, Y., Itoh, T., Sato, M. P., Seto, K., Yoshino, S., Isobe, J., Etoh, Y., Kurogi, M., Kimata, K., Maeda, E., Piérard, D., Kusumoto, M., Akiba, M., Tominaga, K., Kirino, Y., Kato, Y., Shirahige, K., Ooka, T., Ishijima, N. および4人, Lee, K. I., Iyoda, S., Mainil, J. G. & Hayashi, T., 11 2017, : : Microbial Genomics. 3, 11, 000141.

研究成果: ジャーナルへの寄稿記事

10 引用 (Scopus)

R-Spondin1 expands Paneth cells and prevents dysbiosis induced by graft-versus-host disease

Hayase, E., Hashimoto, D., Nakamura, K., Noizat, C., Ogasawara, R., Takahashi, S., Ohigashi, H., Yokoi, Y., Sugimoto, R., Matsuoka, S., Ara, T., Yokoyama, E., Yamakawa, T., Ebata, K., Kondo, T., Hiramine, R., Aizawa, T., Ogura, Y., Hayashi, T., Mori, H. および4人, Kurokawa, K., Tomizuka, K., Ayabe, T. & Teshima, T., 12 1 2017, : : Journal of Experimental Medicine. 214, 12, p. 3507-3518 12 p.

研究成果: ジャーナルへの寄稿記事

24 引用 (Scopus)

Thaumasiovibrio occultus gen. nov. sp. nov. and Thaumasiovibrio subtropicus sp. nov. within the family Vibrionaceae, isolated from coral reef seawater off Ishigaki Island, Japan

Amin, A. K. M. R., Tanaka, M., Al-saari, N., Feng, G., Mino, S., Ogura, Y., Hayashi, T., Meirelles, P. M., Thompson, F. L., Gomez-Gil, B., Sawabe, T. & Sawabe, T., 7 2017, : : Systematic and Applied Microbiology. 40, 5, p. 290-296 7 p.

研究成果: ジャーナルへの寄稿記事

8 引用 (Scopus)

Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed

Tanaka, M., Endo, S., Kotake, F., Al-Saari, N., Amin, A. K. M. R., Feng, G., Mino, S., Doi, H., Ogura, Y., Hayashi, T., Suda, W., Hattori, M., Yumoto, I., Sawabe, T., Sawabe, T. & Araki, T., 6 2017, : : PloS one. 12, 6, e0180053.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)
2018

Amylibacter kogurei sp. Nov., a novel marine alphaproteobacterium isolated from the coastal sea surface microlayer of a marine inlet

Wong, S. K., Yoshizawa, S., Nakajima, Y., Cuadra, M. J., Nogi, Y., Nakamura, K., Takami, H., Ogura, Y., Hayashi, T., Chiura, H. X. & Hamasaki, K., 9 2018, : : International Journal of Systematic and Evolutionary Microbiology. 68, 9, p. 2872-2877 6 p., 002911.

研究成果: ジャーナルへの寄稿記事

2 引用 (Scopus)

Availability of Nanopore sequences in the genome taxonomy for Vibrionaceae systematics: Rumoiensis clade species as a test case

Tanaka, M., Mino, S., Ogura, Y., Hayashi, T. & Sawabe, T., 1 1 2018, : : PeerJ. 2018, 6, e5018.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)

Complete genome sequence of Escherichia albertii strain 1551-2, a potential extracellular and intracellular pathogen

Romão, F. T., Hernandes, R. T., Ooka, T., Hayashi, T., Sperandio, V. & Gomes, T. A. T., 3 1 2018, : : Genome Announcements. 6, 9, e00075-18.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)

Complete genome sequence of Geobacter sulfurreducens strain YM18, isolated from river sediment in Japan

Inoue, K., Ogura, Y., Kawano, Y. & Hayashi, T., 5 1 2018, : : Genome Announcements. 6, 19, e00352-18.

研究成果: ジャーナルへの寄稿記事

Complete genome sequence of Mycobacterium shigaense

Yoshida, M., Fukano, H., Ogura, Y., Kazumi, Y., Mitarai, S., Hayashi, T. & Hoshino, Y., 6 1 2018, : : Genome Announcements. 6, 25, e00552-18.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)

Corrigendum to “Thaumasiovibrio occultus gen. nov. sp. nov. and Thaumasiovibrio subtropicus sp. nov. within the family Vibrionaceae, isolated from coral reef seawater off Ishigaki Island, Japan” [Syst. Appl. Microbiol. 40 (5) (2017) 290–296](S0723202017300607)(10.1016/j.syapm.2017.04.003))

Amin, A. K. M. R., Tanaka, M., Al-saari, N., Feng, G., Mino, S., Ogura, Y., Hayashi, T., Meirelles, P. M., Thompson, F. L., Gomez-Gil, B., Sawabe, T. & Sawabe, T., 1 2018, : : Systematic and Applied Microbiology. 41, 1, p. 62-63 2 p.

研究成果: ジャーナルへの寄稿コメント/討論

1 引用 (Scopus)

Draft genome sequence of Saccharospirillum sp. strain MSK14-1, isolated from surface seawater collected at Aburatsubo Inlet in Japan

Hasegawa, M., Nakajima, Y., Wong, S. K., Nakamura, K., Ogura, Y., Hayashi, T., Kogure, K. & Yoshizawa, S., 5 1 2018, : : Genome Announcements. 6, 22, e00469-18.

研究成果: ジャーナルへの寄稿記事

Genomic characterization of β-glucuronidase–positive escherichia coli O157:H7 producing Stx2a

Ogura, Y., Seto, K., Morimoto, Y., Nakamura, K., Sato, M. P., Gotoh, Y., Itoh, T., Toyoda, A., Ohnishi, M. & Hayashi, T., 12 2018, : : Emerging Infectious Diseases. 24, 12, p. 2219-2227 9 p.

研究成果: ジャーナルへの寄稿記事

2 引用 (Scopus)

Mycobacterium shigaense sp. Nov., a slow-growing, scotochromogenic species, is a member of the mycobacterium simiae complex

Fukano, H., Yoshida, M., Kazumi, Y., Fujiwara, N., Katayama, K., Ogura, Y., Hayashi, T., Miyamoto, Y., Fujimoto, N., Hongsheng, W., Mizumoto, C., Koizumi, Y., Maeda, H., Hiranuma, O., Mitarai, S., Ishii, N. & Hoshino, Y., 8 2018, : : International Journal of Systematic and Evolutionary Microbiology. 68, 8, p. 2437-2442 6 p., 002845.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Naturally occurring a loss of a giant plasmid from Mycobacterium ulcerans subsp. shinshuense makes it non-pathogenic

Nakanaga, K., Ogura, Y., Toyoda, A., Yoshida, M., Fukano, H., Fujiwara, N., Miyamoto, Y., Nakata, N., Kazumi, Y., Maeda, S., Ooka, T., Goto, M., Tanigawa, K., Mitarai, S., Suzuki, K., Ishii, N., Ato, M., Hayashi, T. & Hoshino, Y., 12 1 2018, : : Scientific reports. 8, 1, 8218.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Presence of a haloarchaeal halorhodopsin-like Cl pump in marine bacteria

Nakajima, Y., Tsukamoto, T., Kumagai, Y., Ogura, Y., Hayashi, T., Song, J., Kikukawa, T., Demura, M., Kogure, K., Sudo, Y. & Yoshizawa, S., 1 1 2018, : : Microbes and Environments. 33, 1, p. 89-97 9 p.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)

Small RNA repertoires and their intraspecies variation in Aggregatibacter actinomycetemcomitans

Oogai, Y., Gotoh, Y., Ogura, Y., Kawada-Matsuo, M., Hayashi, T. & Komatsuzawa, H., 4 1 2018, : : DNA Research. 25, 2, p. 207-215 9 p.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia

Kumagai, Y., Yoshizawa, S., Nakajima, Y., Watanabe, M., Fukunaga, T., Ogura, Y., Hayashi, T., Oshima, K., Hattori, M., Ikeuchi, M., Kogure, K., Delong, E. F. & Iwasaki, W., 5 1 2018, : : ISME Journal. 12, 5, p. 1329-1343 15 p.

研究成果: ジャーナルへの寄稿記事

3 引用 (Scopus)

The 1st step initiation essential for allergen-specific IgE antibody production upon the 2nd step: Induction of non-specific IgE+ small B cells containing secondly-sensitized allergen-specific ones in mice firstly-sensitized with an allergen

Hannya, N., Ogita-Nakanishi, H., Kato, R., Ijiri, Y., Hayashi, T., Tanaka, K., Kawata, R., Takenaka, H., Kubota, T. & Yoshida, R., 2 1 2018, : : MICROBIOLOGY and IMMUNOLOGY. 62, 2, p. 99-110 12 p.

研究成果: ジャーナルへの寄稿記事

Tracing genomic divergence of Vibrio bacteria in the Harveyi clade

Ke, H. M., Liu, D., Ogura, Y., Hayashi, T., Urbanczyk, H. & Tsai, I. J., 8 1 2018, : : Journal of bacteriology. 200, 15, e00001-18.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)
2019

Alternative oxidase capacity of mitochondria in microsporophylls may function in cycad thermogenesis

Inaba, Y. I., Sato, M., Sato, M. P., Kurayama, Y., Yamamoto, H., Ohata, M., Ogura, Y., Hayashi, T., Toyooka, K. & Inaba, T., 6 2019, : : Plant physiology. 180, 2, p. 743-756 14 p.

研究成果: ジャーナルへの寄稿記事

公開
1 引用 (Scopus)

Arsenate and microbial dynamics in different phosphorus regimes of the subtropical Pacific Ocean

Hashihama, F., Suwa, S., Kanda, J., Ehama, M., Sakuraba, R., Kinouchi, S., Sato, M., Yamaguchi, T., Saito, H., Ogura, Y., Hayashi, T., Mori, H., Kurokawa, K., Suzuki, S. & Hamasaki, K., 9 2019, : : Progress in Oceanography. 176, 102115.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)

BspR/BtrA, an Anti-σ Factor, Regulates the Ability of Bordetella bronchiseptica To Cause Cough in Rats

Nakamura, K., Shinoda, N., Hiramatsu, Y., Ohnishi, S., Kamitani, S., Ogura, Y., Hayashi, T. & Horiguchi, Y., 4 24 2019, : : mSphere. 4, 2

研究成果: ジャーナルへの寄稿記事

公開
2 引用 (Scopus)

Comparison of the sequencing bias of currently available library preparation kits for Illumina sequencing of bacterial genomes and metagenomes

Sato, M. P., Ogura, Y., Nakamura, K., Nishida, R., Gotoh, Y., Hayashi, M., Hisatsune, J., Sugai, M., Takehiko, I. & Hayashi, T., 10 1 2019, : : DNA Research. 26, 5, p. 391-398 8 p.

研究成果: ジャーナルへの寄稿記事

公開

Draft genome sequence of mycolicibacterium sp. strain ncctsukiji, isolated from blood culture of a patient with malignant lymphoma

Fukano, H., Yoshida, M., Shouji, M., Hatta, S., Maruyama, D., Izutsu, K., Shiotsuka, M., Ogura, Y., Hayashi, T., Hasegawa, N., Iwata, S. & Hoshino, Y., 1 1 2019, : : Microbiology Resource Announcements. 8, 14, e01575-18.

研究成果: ジャーナルへの寄稿記事

公開

Evaluation of SNP calling methods for closely related bacterial isolates and a novel high-accuracy pipeline: BactSNP

Yoshimura, D., Kajitani, R., Gotoh, Y., Katahira, K., Okuno, M., Ogura, Y., Hayashi, T. & Itoh, T., 5 1 2019, : : Microbial Genomics. 5, 5

研究成果: ジャーナルへの寄稿記事

公開

Genome sequencing verifies relapsed infection of helicobacter cinaedi

Sawada, O., Gotoh, Y., Taniguchi, T., Furukawa, S., Yoshimura, D., Sasaki, S., Shida, H., Kusunoki, Y., Yamamura, T., Furuya, K., Itoh, T., Horita, T., Hayashi, T. & Misawa, N., 1 1 2019, : : Open Forum Infectious Diseases. 6, 5

研究成果: ジャーナルへの寄稿記事

公開

Genomic Features of Rickettsia heilongjiangensis Revealed by Intraspecies Comparison and Detailed Comparison With Rickettsia japonica

Kasama, K., Fujita, H., Yamamoto, S., Ooka, T., Gotoh, Y., Ogura, Y., Ando, S. & Hayashi, T., 12 6 2019, : : Frontiers in Microbiology. 10, 2787.

研究成果: ジャーナルへの寄稿記事

公開

Genotypic diversity of Streptococcus suis and the S. suis-like bacterium Streptococcus ruminantium in ruminants

Okura, M., Maruyama, F., Ota, A., Tanaka, T., Matoba, Y., Osawa, A., Sadaat, S. M., Osaki, M., Toyoda, A., Ogura, Y., Hayashi, T. & Takamatsu, D., 11 14 2019, : : Veterinary Research. 50, 1, 94.

研究成果: ジャーナルへの寄稿記事

公開

Large-scale genome analysis of bovine commensal Escherichia coli reveals that bovine-adapted E. Coli lineages are serving as evolutionary sources of the emergence of human intestinal pathogenic strains

Arimizu, Y., Kirino, Y., Sato, M. P., Uno, K., Sato, T., Gotoh, Y., Auvray, F., Brugere, H., Oswald, E., Mainil, J. G., Anklam, K. S., Döpfer, D., Yoshino, S., Ooka, T., Tanizawa, Y., Nakamura, Y., Iguchi, A., Morita-Ishihara, T., Ohnishi, M., Akashi, K. および2人, Hayashi, T. & Ogura, Y., 1 1 2019, : : Genome Research. 29, 9, p. 1495-1505 11 p.

研究成果: ジャーナルへの寄稿記事

公開
1 引用 (Scopus)

Local structural changes of the influenza A virus ribonucleoprotein complex by single mutations in the specific residues involved in efficient genome packaging

Takizawa, N., Ogura, Y., Fujita, Y., Noda, T., Shigematsu, H., Hayashi, T. & Kurokawa, K., 5 2019, : : Virology. 531, p. 126-140 15 p.

研究成果: ジャーナルへの寄稿記事

1 引用 (Scopus)

Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer

Yachida, S., Mizutani, S., Shiroma, H., Shiba, S., Nakajima, T., Sakamoto, T., Watanabe, H., Masuda, K., Nishimoto, Y., Kubo, M., Hosoda, F., Rokutan, H., Matsumoto, M., Takamaru, H., Yamada, M., Matsuda, T., Iwasaki, M., Yamaji, T., Yachida, T., Soga, T. および10人, Kurokawa, K., Toyoda, A., Ogura, Y., Hayashi, T., Hatakeyama, M., Nakagama, H., Saito, Y., Fukuda, S., Shibata, T. & Yamada, T., 6 1 2019, : : Nature medicine. 25, 6, p. 968-976 9 p.

研究成果: ジャーナルへの寄稿記事

35 引用 (Scopus)

Multi-step genomic dissection of a suspected intra-hospital helicobacter cinaedi outbreak

Gotoh, Y., Taniguchi, T., Yoshimura, D., Katsura, K., Saeki, Y., Hirabara, Y., Fukuda, M., Takajo, I., Tomida, J., Kawamura, Y., Ogura, Y., Itoh, T., Misawa, N., Okayama, A. & Hayashi, T., 1 2019, : : Microbial Genomics. 5, 1, 000236.

研究成果: ジャーナルへの寄稿記事

2 引用 (Scopus)

O-antigen biosynthesis gene clusters of Escherichia albertii: Their diversity and similarity to Escherichia coli gene clusters and the development of an o-genotyping method

Ooka, T., Seto, K., Ogura, Y., Nakamura, K., Iguchi, A., Gotoh, Y., Honda, M., Etoh, Y., Ikeda, T., Sugitani, W., Konno, T., Kawano, K., Imuta, N., Yoshiie, K., Hara-Kudo, Y., Murakami, K., Hayashi, T. & Nishi, J., 1 1 2019, : : Microbial Genomics. 5, 11, 000314.

研究成果: ジャーナルへの寄稿記事

公開
1 引用 (Scopus)

Phenotypic characterization and virulence-related properties of Escherichia albertii strains isolated from children with diarrhea in Brazil

Lima, M. P., Yamamoto, D., de Mello Santos, A. C., Ooka, T., Hernandes, R. T., Vieira, M. A. M., Santos, F. F., Silva, R. M., Hayashi, T. & Gomes, T. A. T., 3 1 2019, : : Pathogens and disease. 77, 2

研究成果: ジャーナルへの寄稿記事

公開
2020

An optimized metabarcoding method for mimiviridae

Prodinger, F., Endo, H., Gotoh, Y., Li, Y., Morimoto, D., Omae, K., Tominaga, K., Blanc-Mathieu, R., Takano, Y., Hayashi, T., Nagasaki, K., Yoshida, T. & Ogata, H., 4 2020, : : Microorganisms. 8, 4, 506.

研究成果: ジャーナルへの寄稿記事

公開

Differential dynamics and impacts of prophages and plasmids on the pangenome and virulence factor repertoires of shiga toxin-producing escherichia coli O145:H28

Nakamura, K., Murase, K., Sato, M. P., Toyoda, A., Itoh, T., Mainil, J. G., Piérard, D., Yoshino, S., Kimata, K., Isobe, J., Seto, K., Etoh, Y., Narimatsu, H., Saito, S., Yatsuyanagi, J., Lee, K., Iyoda, S., Ohnishi, M., Ooka, T., Gotoh, Y. および2人, Ogura, Y. & Hayashi, T., 1 1 2020, : : Microbial Genomics. 6, 1, 000323.

研究成果: ジャーナルへの寄稿記事

公開

Epidemiological Aspects of Escherichia albertii Outbreaks in Japan and Genetic Characteristics of the Causative Pathogen

Masuda, K., Ooka, T., Akita, H., Hiratsuka, T., Takao, S., Fukada, M., Inoue, K., Honda, M., Toda, J., Sugitani, W., Narimatsu, H., Ishioka, T., Hirai, S., Sekizuka, T., Kuroda, M., Morita, Y., Hayashi, T., Kimura, H., Oishi, K., Ohnishi, M. および2人, Fujimoto, S. & Murakami, K., 2 2020, : : Foodborne Pathogens and Disease. 17, 2, p. 144-150 7 p.

研究成果: ジャーナルへの寄稿記事

Escherichia coli O8:H8 Carrying a novel variant of the heat-labile enterotoxin LT2 gene caused outbreaks of diarrhea

Ishimaru, K., Sasaki, M., Narimatsu, H., Arimizu, Y., Gotoh, Y., Nakamura, K., Hayashi, T. & Ogura, Y., 1 1 2020, : : Open Forum Infectious Diseases. 7, 1

研究成果: ジャーナルへの寄稿記事

公開
1 引用 (Scopus)

Group A Streptococcus establishes pharynx infection by degrading the deoxyribonucleic acid of neutrophil extracellular traps

Tanaka, M., Kinoshita-Daitoku, R., Kiga, K., Sanada, T., Zhu, B., Okano, T., Aikawa, C., Iida, T., Ogura, Y., Hayashi, T., Okubo, K., Kurosawa, M., Hirahashi, J., Suzuki, T., Nakagawa, I., Nangaku, M. & Mimuro, H., 12 1 2020, : : Scientific reports. 10, 1, 3251.

研究成果: ジャーナルへの寄稿記事

公開

Hypoosmotic stress induces flagellar biosynthesis and swimming motility in Escherichia albertii

Ikeda, T., Shinagawa, T., Ito, T., Ohno, Y., Kubo, A., Nishi, J., Gotoh, Y., Ogura, Y., Ooka, T. & Hayashi, T., 12 1 2020, : : Communications Biology. 3, 1, 87.

研究成果: ジャーナルへの寄稿記事

公開

Mutational diversity in mutY deficient Helicobacter pylori and its effect on adaptation to the gastric environment

Kinoshita-Daitoku, R., Kiga, K., Sanada, T., Ogura, Y., Bo, Z., Iida, T., Yokomori, R., Kuroda, E., Tanaka, M., Sood, A., Suzuki, T., Nakai, K., Hayashi, T. & Mimuro, H., 5 7 2020, : : Biochemical and Biophysical Research Communications. 525, 3, p. 806-811 6 p.

研究成果: ジャーナルへの寄稿記事

Non-pathogenic Escherichia coli acquires virulence by mutating a growth-essential LPS transporter

Kaito, C., Yoshikai, H., Wakamatsu, A., Miyashita, A., Matsumoto, Y., Fujiyuki, T., Kato, M., Ogura, Y., Hayashi, T., Isogai, T. & Sekimizu, K., 4 2020, : : PLoS pathogens. 16, 4, e1008469.

研究成果: ジャーナルへの寄稿記事

公開

Staphylococcus aureus virulence affected by an alternative nisin a resistance mechanism

Kawada-Matsuo, M., Watanabe, A., Arii, K., Oogai, Y., Noguchi, K., Miyawaki, S., Hayashi, T. & Komatsuzawa, H., 4 1 2020, : : Applied and environmental microbiology. 86, 8, p. 1-14 14 p.

研究成果: ジャーナルへの寄稿記事