• 12482 引用
  • 47 h指数
1989 …2020

Research output per year

Pureに変更を加えた場合、すぐここに表示されます。

研究成果

  • 12482 引用
  • 47 h指数
  • 214 記事
  • 12 評論記事
  • 10 コメント/討論
  • 2 レター
2014

Lineage-specific distribution of insertion sequence excision enhancer in enterotoxigenic Escherichia coli isolated from swine

Kusumoto, M., Fukamizu, D., Ogura, Y., Yoshida, E., Yamamoto, F., Iwata, T., Ooka, T., Akiba, M. & Hayashi, T., 2 1 2014, : : Applied and environmental microbiology. 80, 4, p. 1394-1402 9 p.

研究成果: ジャーナルへの寄稿記事

6 引用 (Scopus)

Molecular characterization of cytolethal distending toxin gene-positive Escherichia coli from healthy cattle and swine in Nara, Japan

Hinenoya, A., Shima, K., Asakura, M., Nishimura, K., Tsukamoto, T., Ooka, T., Hayashi, T., Ramamurthy, T., Faruque, S. M. & Yamasaki, S., 4 18 2014, : : BMC Microbiology. 14, 1, 97.

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)

Rapid identification and subtyping of helicobacter cinaedi strains by intact-cell mass spectrometry profiling with the use of matrix-assisted laser desorption ionization-time of flight mass spectrometry

Taniguchi, T., Sekiya, A., Higa, M., Saeki, Y., Umeki, K., Okayama, A., Hayashi, T. & Misawa, N., 1 1 2014, : : Journal of Clinical Microbiology. 52, 1, p. 95-102 8 p.

研究成果: ジャーナルへの寄稿記事

20 引用 (Scopus)

Various pAQU plasmids possibly contribute to disseminate tetracycline resistance gene tet(M) among marine bacterial community

Nonaka, L., Maruyama, F., Onishi, Y., Kobayashi, T., Ogura, Y., Hayashi, T., Suzuki, S. & Masuda, M., 1 1 2014, : : Frontiers in Microbiology. 5, MAY, 152.

研究成果: ジャーナルへの寄稿記事

15 引用 (Scopus)
2013

Comparative evaluation of agar dilution and broth microdilution methods for antibiotic susceptibility testing of Helicobacter cinaedi

Tomida, J., Oumi, A., Okamoto, T., Morita, Y., Okayama, A., Misawa, N., Hayashi, T., Akaike, T. & Kawamura, Y., 5 1 2013, : : MICROBIOLOGY and IMMUNOLOGY. 57, 5, p. 353-358 6 p.

研究成果: ジャーナルへの寄稿記事

12 引用 (Scopus)

Complete genome sequence of a Propionibacterium acnes isolate from a sarcoidosis patient

Minegishi, K., Aikawa, C., Furukawa, A., Watanabe, T., Nakano, T., Ogura, Y., Ohtsubo, Y., Kurokawa, K., Hayashi, T., Maruyama, F., Nakagawa, I. & Eishi, Y., 1 1 2013, : : Genome Announcements. 1, 1, e00016-12.

研究成果: ジャーナルへの寄稿記事

10 引用 (Scopus)

Direct light-up of cAMP derivatives in living cells by click reactions

Ito, K., Liu, H., Komiyama, M., Hayashi, T. & Xu, Y., 10 1 2013, : : Molecules. 18, 10, p. 12909-12915 7 p.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Diversification of two lineages of symbiotic photobacterium

Urbanczyk, H., Urbanczyk, Y., Hayashi, T. & Ogura, Y., 12 13 2013, : : PloS one. 8, 12, e82917.

研究成果: ジャーナルへの寄稿記事

4 引用 (Scopus)

Human gastroenteritis outbreak associated with Escherichia albertii, Japan

Ooka, T., Tokuoka, E., Furukawa, M., Nagamura, T., Ogura, Y., Arisawa, K., Harada, S. & Hayashi, T., 1 1 2013, : : Emerging Infectious Diseases. 19, 1, p. 144-146 3 p.

研究成果: ジャーナルへの寄稿記事

42 引用 (Scopus)

Involvement of the novel two-component nsrrs and lcrrs systems in distinct resistance pathways against nisin a and nukacin isk-1 in streptococcus mutans

Kawada-Matsuo, M., Oogai, Y., Zendo, T., Nagao, J., Shibata, Y., Yamashita, Y., Ogura, Y., Hayashi, T., Sonomoto, K. & Komatsuzawa, H., 8 1 2013, : : Applied and environmental microbiology. 79, 15, p. 4751-4755 5 p.

研究成果: ジャーナルへの寄稿記事

13 引用 (Scopus)

PhoB Regulates the Survival of Bacteroides fragilis in Peritoneal Abscesses

Wakimoto, S., Nakayama-Imaohji, H., Ichimura, M., Morita, H., Hirakawa, H., Hayashi, T., Yasutomo, K. & Kuwahara, T., 1 15 2013, : : PloS one. 8, 1, e53829.

研究成果: ジャーナルへの寄稿記事

8 引用 (Scopus)
30 引用 (Scopus)

Transcriptomic analysis of four developmental stages of Strongyloides venezuelensis

Nagayasu, E., Ogura, Y., Itoh, T., Yoshida, A., Chakraborty, G., Hayashi, T. & Maruyama, H., 2 1 2013, : : Parasitology International. 62, 1, p. 57-65 9 p.

研究成果: ジャーナルへの寄稿記事

12 引用 (Scopus)

Updating the Vibrio clades defined by multilocus sequence phylogeny: Proposal of eight new clades, and the description of Vibrio tritonius sp. nov.

Sawabe, T., Ogura, Y., Matsumura, Y., Feng, G., Rohul Amin, A. K. M., Mino, S., Nakagawa, S., Sawabe, T., Kumar, R., Fukui, Y., Satomi, M., Matsushima, R., Thompson, F. L., Gomez-Gil, B., Christen, R., Maruyama, F., Kurokawa, K. & Hayashi, T., 1 1 2013, : : Frontiers in Microbiology. 4, DEC

研究成果: ジャーナルへの寄稿記事

133 引用 (Scopus)

Whole-genome sequence of the potentially hypertransmissible multidrug-resistant Mycobacterium tuberculosis Beijing strain OM-V02_005

Tateishi, Y., Tamaru, A., Ogura, Y., Niki, M., Wada, T., Yamamoto, T., Hirata, K., Hayashi, T. & Matsumoto, S., 1 1 2013, : : Genome Announcements. 1, 4, e00608-13.

研究成果: ジャーナルへの寄稿記事

2012

A sensitive and simple plaque formation method for the Stx2 phage of Escherichia coli O157: H7, which does not form plaques in the standard plating procedure

Islam, M. R., Ogura, Y., Asadulghani, M., Ooka, T., Murase, K., Gotoh, Y. & Hayashi, T., 5 1 2012, : : Plasmid. 67, 3, p. 227-235 9 p.

研究成果: ジャーナルへの寄稿記事

14 引用 (Scopus)

Clinical significance of Escherichia albertii

Ooka, T., Seto, K., Kawano, K., Kobayashi, H., Etoh, Y., Ichihara, S., Kaneko, A., Isobe, J., Yamaguchi, K., Horikawa, K., Gomes, T. A., Linden, A., Bardiau, M., Mainil, J. G., Beutin, L., Ogura, Y. & Hayashi, T., 3 1 2012, : : Emerging Infectious Diseases. 18, 3, p. 488-492 5 p.

研究成果: ジャーナルへの寄稿記事

77 引用 (Scopus)

Complete genome sequence of Bacillus cereus NC7401, which produces high levels of the emetic toxin cereulide

Takeno, A., Okamoto, A., Tori, K., Oshima, K., Hirakawa, H., Toh, H., Agata, N., Yamada, K., Ogasawara, N., Hayashi, T., Shimizu, T., Kuhara, S., Hattori, M. & Ohta, M., 9 1 2012, : : Journal of bacteriology. 194, 17, p. 4767-4768 2 p.

研究成果: ジャーナルへの寄稿コメント/討論

12 引用 (Scopus)

Complete genome sequence of Helicobacter cinaedi strain PAGU611, isolated in a case of human bacteremia

Goto, T., Ogura, Y., Hirakawa, H., Tomida, J., Morita, Y., Akaike, T., Hayashi, T. & Kawamura, Y., 7 1 2012, : : Journal of bacteriology. 194, 14, p. 3744-3745 2 p.

研究成果: ジャーナルへの寄稿コメント/討論

23 引用 (Scopus)

Culture-negative brain abscess with Streptococcus intermedius infection with diagnosis established by direct nucleotide sequence analysis of the 16s ribosomal RNA gene

Saito, N., Hida, A., Koide, Y., Ooka, T., Ichikawa, Y., Shimizu, J., Mukasa, A., Nakatomi, H., Hatakeyama, S., Hayashi, T. & Tsuji, S., 1 24 2012, : : Internal Medicine. 51, 2, p. 211-216 6 p.

研究成果: ジャーナルへの寄稿記事

15 引用 (Scopus)

Detection of diverse aquatic microbes in blood and organs of drowning victims: First metagenomic approach using high-throughput 454-pyrosequencing

Kakizaki, E., Ogura, Y., Kozawa, S., Nishida, S., Uchiyama, T., Hayashi, T. & Yukawa, N., 7 10 2012, : : Forensic Science International. 220, 1-3, p. 135-146 12 p.

研究成果: ジャーナルへの寄稿記事

30 引用 (Scopus)

Haemolysin E- and enterohaemolysin-derived haemolytic activity of O55/O157 strains and other Escherichia coli lineages

Murase, K., Ooka, T., Iguchi, A., Ogura, Y., Nakayama, K., Asadulghani, M., Islam, M. R., Hiyoshi, H., Kodama, T., Beutin, L. & Hayashi, T., 3 1 2012, : : Microbiology. 158, 3, p. 746-758 13 p.

研究成果: ジャーナルへの寄稿記事

10 引用 (Scopus)

Is bile acid a determinant of the gut microbiota on a high-fat diet?

Yokota, A., Fukiya, S., Ooka, T., Ogura, Y., Hayashi, T. & Ishizuka, S., 1 1 2012, : : Gut Microbes. 3, 5

研究成果: ジャーナルへの寄稿記事

84 引用 (Scopus)

Oligonucleotide models of telomeric DNA and RNA form a hybrid G-quadruplex structure as a potential component of telomeres

Xu, Y., Ishizuka, T., Yang, J., Ito, K., Katada, H., Komiyama, M. & Hayashi, T., 12 7 2012, : : Journal of Biological Chemistry. 287, 50, p. 41787-41796 10 p.

研究成果: ジャーナルへの寄稿記事

26 引用 (Scopus)

Whole-Genome Sequence of the Hypervirulent Clinical Strain Mycobacterium intracellulare M.i.198

Tateishi, Y., Kitad, S., Miki, K., Maekura, R., Ogura, Y., Ozeki, Y., Nishiuchi, Y., Niki, M., Hayashi, T., Hirata, K., Kobayashi, K. & Matsumoto, S., 11 1 2012, : : Journal of bacteriology. 194, 22, 1 p.

研究成果: ジャーナルへの寄稿コメント/討論

1 引用 (Scopus)
2011

Bile acid is a host factor that regulates the composition of the cecal microbiota in rats

Islam, K. B. M. S., Fukiya, S., Hagio, M., Fujii, N., Ishizuka, S., Ooka, T., Ogura, Y., Hayashi, T. & Yokota, A., 11 2011, : : Gastroenterology. 141, 5, p. 1773-1781 9 p.

研究成果: ジャーナルへの寄稿記事

361 引用 (Scopus)

Characterization of the porphyromonas gingivalis conjugative transposon CTnPg1: Determination of the integration site and the genes essential for conjugal transfer

Naito, M., Sato, K., Shoji, M., Yukitake, H., Ogura, Y., Hayashi, T. & Nakayama, K., 7 1 2011, : : Microbiology. 157, 7, p. 2022-2032 11 p.

研究成果: ジャーナルへの寄稿記事

14 引用 (Scopus)

Enterotypes of the human gut microbiome

Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., Batto, J. M., Bertalan, M., Borruel, N., Casellas, F., Fernandez, L., Gautier, L., Hansen, T., Hattori, M., Hayashi, T., Kleerebezem, M., Kurokawa, K. および22人, Leclerc, M., Levenez, F., Manichanh, C., Nielsen, H. B., Nielsen, T., Pons, N., Poulain, J., Qin, J., Sicheritz-Ponten, T., Tims, S., Torrents, D., Ugarte, E., Zoetendal, E. G., Wang, J., Guarner, F., Pedersen, O., De Vos, W. M., Brunak, S., Doré, J., Weissenbach, J., Ehrlich, S. D. & Bork, P., 5 12 2011, : : Nature. 473, 7346, p. 174-180 7 p.

研究成果: ジャーナルへの寄稿記事

2900 引用 (Scopus)

Erratum: Enterotypes of the human gut microbiome (Nature (2011) 473 (174-180))

Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., Batto, J. M., Bertalan, M., Borruel, N., Casellas, F., Fernandez, L., Gautier, L., Hansen, T., Hattori, M., Hayashi, T., Kleerebezem, M., Kurokawa, K. および23人, Leclerc, M., Levenez, F., Manichanh, C., Nielsen, H. B., Nielsen, T., Pons, N., Poulain, J., Qin, J., Sicheritz-Ponten, T., Tims, S., Torrents, D., Ugarte, E., Zoetendal, E. G., Junwang, Guarner, F., Pedersen, O., De Vos, W. M., Brunak, S. R., Dora, J., Consortium, M., Weissenbach, J., Ehrlich, S. D. & Bork, P., 6 30 2011, : : Nature. 474, 7353, 1 p.

研究成果: ジャーナルへの寄稿コメント/討論

12 引用 (Scopus)

Genome sequence of Photobacterium mandapamensis strain svers.1.1, the bioluminescent symbiont of the cardinal fish Siphamia versicolor

Urbanczyk, H., Ogura, Y., Hendry, T. A., Gould, A. L., Kiwaki, N., Atkinson, J. T., Hayashi, T. & Dunlap, P. V., 6 1 2011, : : Journal of bacteriology. 193, 12, p. 3144-3145 2 p.

研究成果: ジャーナルへの寄稿コメント/討論

18 引用 (Scopus)

Insertion sequence-excision enhancer removes transposable elements from bacterial genomes and induces various genomic deletions

Kusumoto, M., Ooka, T., Nishiya, Y., Ogura, Y., Saito, T., Sekine, Y., Iwata, T., Akiba, M. & Hayashi, T., 1 18 2011, : : Nature communications. 2, 1, 152.

研究成果: ジャーナルへの寄稿記事

23 引用 (Scopus)

The genome of Erysipelothrix rhusiopathiae, the causative agent of swine erysipelas, reveals new insights into the evolution of Firmicutes and the organism's intracellular adaptations

Ogawa, Y., Ooka, T., Shi, F., Ogura, Y., Nakayama, K., Hayashi, T. & Shimoji, Y., 6 1 2011, : : Journal of bacteriology. 193, 12, p. 2959-2971 13 p.

研究成果: ジャーナルへの寄稿記事

41 引用 (Scopus)

The lifestyle of the segmented filamentous bacterium: A non-culturable gut-associated immunostimulating microbe inferred by whole-genome sequencing

Kuwahara, T., Ogura, Y., Oshima, K., Kurokawa, K., Ooka, T., Hirakawa, H., Itoh, T., Nakayama-Imaohji, H., Ichimura, M., Itoh, K., Ishifune, C., Maekawa, Y., Yasutomo, K., Hattori, M. & Hayashi, T., 8 1 2011, : : DNA Research. 18, 4, p. 291-303 13 p.

研究成果: ジャーナルへの寄稿記事

60 引用 (Scopus)

Typing of O26 enterohaemorrhagic and enteropathogenic Escherichia coli isolated from humans and cattle with IS621 multiplex PCR-based fingerprinting

Mainil, J. G., Bardiau, M., Ooka, T., Ogura, Y., Murase, K., Etoh, Y., Ichihara, S., Horikawa, K., Buvens, G., Piérard, D., Itoh, T. & Hayashi, T., 9 1 2011, : : Journal of Applied Microbiology. 111, 3, p. 773-786 14 p.

研究成果: ジャーナルへの寄稿記事

5 引用 (Scopus)

Wide distribution of O157-antigen biosynthesis gene clusters in Escherichia coli

Iguchi, A., Shirai, H., Seto, K., Ooka, T., Ogura, Y., Hayashi, T., Osawa, K. & Osawa, R., 8 24 2011, : : PloS one. 6, 8, e23250.

研究成果: ジャーナルへの寄稿記事

14 引用 (Scopus)
2010

[Progress of the genome analysis of bacteria].

Ooka, T. & Hayashi, T., 1 1 2010, : : Nippon rinsho. Japanese journal of clinical medicine. 68 Suppl 8, p. 144-149 6 p.

研究成果: ジャーナルへの寄稿評論記事

Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2

Toh, H., Oshima, K., Toyoda, A., Ogura, Y., Ooka, T., Sasamoto, H., Park, S. H., Iyoda, S., Kurokawa, K., Morita, H., Itoh, K., Taylor, T. D., Hayashi, T. & Hattori, M., 2 1 2010, : : Journal of bacteriology. 192, 4, p. 1165-1166 2 p.

研究成果: ジャーナルへの寄稿記事

40 引用 (Scopus)

Efficient electrotransformation of Bacteroides fragilis

Ichimura, M., Nakayama-Imaohji, H., Wakimoto, S., Morita, H., Hayashi, T. & Kuwahara, T., 5 1 2010, : : Applied and environmental microbiology. 76, 10, p. 3325-3332 8 p.

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)

Genome comparison and phylogenetic analysis of orientia tsutsugamushi strains

Nakayama, K., Kurokawa, K., Fukuhara, M., Urakami, H., Yamamoto, S., Yamazaki, K., Ogura, Y., Ooka, T. & Hayashi, T., 10 1 2010, : : DNA Research. 17, 5, p. 281-291 11 p.

研究成果: ジャーナルへの寄稿記事

30 引用 (Scopus)

Identification of candidate pathogens of papillomatous digital dermatitis in dairy cattle from quantitative 16S rRNA clonal analysis

Yano, T., Moe, K. K., Yamazaki, K., Ooka, T., Hayashi, T. & Misawa, N., 7 1 2010, : : Veterinary Microbiology. 143, 2-4, p. 352-362 11 p.

研究成果: ジャーナルへの寄稿記事

45 引用 (Scopus)

New system for multilocus variable-number tandem-repeat analysis of the enterohemorrhagic Escherichia coli strains belonging to three major serogroups: O157, O26, and O111

Izumiya, H., Pei, Y., Terajima, J., Ohnishi, M., Hayashi, T., Iyoda, S. & Watanabe, H., 10 1 2010, : : MICROBIOLOGY and IMMUNOLOGY. 54, 10, p. 569-577 9 p.

研究成果: ジャーナルへの寄稿記事

23 引用 (Scopus)

Nlec, a type III secretion protease, compromises NF-kB activation by targeting p65/rela

Yen, H., Ooka, T., Iguchi, A., Hayashi, T., Sugimoto, N. & Tobe, T., 12 1 2010, : : PLoS pathogens. 6, 12, e1001231.

研究成果: ジャーナルへの寄稿記事

105 引用 (Scopus)
2009

A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis

Leopold, S. R., Magrini, V., Holt, N. J., Shaikh, N., Mardis, E. R., Cagno, J., Ogura, Y., Iguchi, A., Hayashi, T., Mellmanng, A., Karch, H., Besser, T. E., Sawyer, S. A., Whittam, T. S. & Tarr, P. I., 5 26 2009, : : Proceedings of the National Academy of Sciences of the United States of America. 106, 21, p. 8713-8718 6 p.

研究成果: ジャーナルへの寄稿記事

83 引用 (Scopus)

Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli

Ogura, Y., Ooka, T., Iguchi, A., Toh, H., Asadulghani, M., Oshima, K., Kodama, T., Abe, H., Nakayama, K., Kurokawa, K., Tobe, T., Hattori, M. & Hayashi, T., 10 20 2009, : : Proceedings of the National Academy of Sciences of the United States of America. 106, 42, p. 17939-17944 6 p.

研究成果: ジャーナルへの寄稿記事

214 引用 (Scopus)

Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69

Iguchi, A., Thomson, N. R., Ogura, Y., Saunders, D., Ooka, T., Henderson, I. R., Harris, D., Asadulghani, M., Kurokawa, K., Dean, P., Kenny, B., Quail, M. A., Thurston, S., Dougan, G., Hayashi, T., Parkhill, J. & Frankel, G., 1 1 2009, : : Journal of bacteriology. 91, 1, p. 347-354 8 p.

研究成果: ジャーナルへの寄稿記事

210 引用 (Scopus)

Development of a multiplex PCR-based rapid typing method for enterohemorrhagic Escherichia coli O157 strains

Ooka, T., Terajima, J., Kusumoto, M., Iguchi, A., Kurokawa, K., Ogura, Y., Asadulghani, M., Nakayama, K., Murase, K., Ohnishi, M., Iyoda, S., Watanabe, H. & Hayashi, T., 9 1 2009, : : Journal of Clinical Microbiology. 47, 9, p. 2888-2894 7 p.

研究成果: ジャーナルへの寄稿記事

38 引用 (Scopus)

Enterohaemorrhagic Escherichia coli serogroup O111 inhibits NF-κB-dependent innate responses in a manner independent of a type III secreted OspG orthologue

Nobe, R., Nougayrède, J. P., Taieb, F., Oswald, E., Bardiau, M., Cassart, D., Navarro-Garcia, F., Mainil, J. & Hayashi, T., 11 23 2009, : : Microbiology. 155, 10, p. 3214-3225 12 p.

研究成果: ジャーナルへの寄稿記事

15 引用 (Scopus)

Enterohemorrhagic Escherichia coli effector EspL2 induces actin microfilament aggregation through annexin 2 activation

Miyahara, A., Nakanishi, N., Ooka, T., Hayashi, T., Sugimoto, N. & Tobe, T., 1 23 2009, : : Cellular Microbiology. 11, 2, p. 337-350 14 p.

研究成果: ジャーナルへの寄稿記事

16 引用 (Scopus)

Genetic heterogeneity among strains of Treponema phagedenis-like spirochetes isolated from dairy cattle with papillomatous digital dermatitis in Japan

Yano, T., Yamagami, R., Misumi, K., Kubota, C., Kyaw, K. M., Hayashi, T., Yoshitani, K., Ohtake, O. & Misawa, N., 3 1 2009, : : Journal of Clinical Microbiology. 47, 3, p. 727-733 7 p.

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)

Identification of the site-specific DNA invertase responsible for the phase variation of SusC/SusD family outer membrane proteins in Bacteroides fragilis

Nakayama-Imaohji, H., Hirakawa, H., Ichimura, M., Wakimoto, S., Kuhara, S., Hayashi, T. & Kuwahara, T., 9 21 2009, : : Journal of bacteriology. 191, 19, p. 6003-6011 9 p.

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)