Pureに変更を加えた場合、すぐここに表示されます。

研究成果 1994 2017

  • 2891 引用
  • 29 h指数
  • 92 記事
  • 3 評論記事
  • 1
  • 1 章 (査読済み)
2017
5 引用 (Scopus)

Structural basis for the broad substrate specificity of the human tyrosylprotein sulfotransferase-1

Tanaka, S., Nishiyori, T., Kojo, H., Otsubo, R., Tsuruta, M., Kurogi, K., Liu, M. C., Suiko, M., Sakakibara, Y. & Kakuta, Y., 12 1 2017, : : Scientific reports. 7, 1, 8776.

研究成果: ジャーナルへの寄稿記事

Substrates
Tyrosine
Proteins
Crystal structure
Protein Isoforms
2016
4 引用 (Scopus)

A rationally engineered yeast pyruvyltransferase Pvg1p introduces sialylation-like properties in neo-human-Type complex oligosaccharide

Higuchi, Y., Yoshinaga, S., Yoritsune, K. I., Tateno, H., Hirabayashi, J., Nakakita, S. I., Kanekiyo, M., Kakuta, Y. & Takegawa, K., 5 19 2016, : : Scientific reports. 6, 26349.

研究成果: ジャーナルへの寄稿記事

Oligosaccharides
Glycopeptides
Yeasts
Lectins
Bioengineering
4 引用 (Scopus)

Functional implication of archaeal homologues of human RNase P protein pair Pop5 and Rpp30

Hamasaki, M., Hazeyama, K., Iwasaki, F., Ueda, T., Nakashima, T., Kakuta, Y. & Kimura, M., 1 1 2016, : : Journal of biochemistry. 159, 1, p. 31-40 10 p.

研究成果: ジャーナルへの寄稿記事

Ribonuclease P
Surface Plasmon Resonance
Surface plasmon resonance
Pyrococcus horikoshii
Chemical activation
2015
1 引用 (Scopus)
Ribonuclease P
Nucleic Acid Hybridization
Nucleic Acids
DNA
Fluorescence Resonance Energy Transfer
1 引用 (Scopus)
Thermococcus
Ribonuclease P
Gene encoding
Archaea
RNA Precursors
3 引用 (Scopus)

On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis

Suematsu, K., Ueda, T., Nakashima, T., Kakuta, Y. & Kimura, M., 1 1 2015, : : Bioscience, Biotechnology and Biochemistry. 79, 6, p. 952-959 8 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Thermococcus
Ribonuclease P
Archaea
RNA Precursors
2014
3 引用 (Scopus)

Characterization of putative toxin/antitoxin systems in Vibrio parahaemolyticus

Hino, M., Zhang, J., Takagi, H., Miyoshi, T., Uchiumi, T., Nakashima, T., Kakuta, Y. & Kimura, M., 1 1 2014, : : Journal of Applied Microbiology. 117, 1, p. 185-195 11 p.

研究成果: ジャーナルへの寄稿記事

Vibrio parahaemolyticus
Antitoxins
Escherichia coli
Multigene Family
Growth
6 引用 (Scopus)

Characterization of the peripheral structures of archaeal RNase P RNA from Pyrococcus horikoshii OT3

Ueda, T., Yamaguchi, H., Miyanoshita, M., Nakashima, T., Kakuta, Y. & Kimura, M., 1 27 2014, : : Journal of Biochemistry. 155, 1, p. 25-33 9 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
RNA
RNA Precursors
Proteins

Enhancement of RNA annealing and strand displacement found in archaeal ribonuclease P proteins is conserved in Escherichia coli protein C5 and yeast protein Rpr2

Furutani, T., Hazeyama, K., Ueda, T., Tomita, S., Imai, T., Nakashima, T., Kakuta, Y. & Kimura, M., 1 1 2014, : : Bioscience, Biotechnology and Biochemistry. 78, 10, p. 1700-1702 3 p.

研究成果: ジャーナルへの寄稿記事

Ribonuclease P
Fungal Proteins
Escherichia coli Proteins
RNA
Annealing
14 引用 (Scopus)
RNA Precursors
Arabidopsis
Nucleotides
Ribonuclease P
RNA, Transfer, Phe
5 引用 (Scopus)

Tamavidin 2-HOT, a highly thermostable biotin-binding protein

Takakura, Y., Suzuki, J., Oka, N. & Kakuta, Y., 1 10 2014, : : Journal of Biotechnology. 169, 1, p. 1-8 8 p.

研究成果: ジャーナルへの寄稿記事

Biotin
Streptavidin
Avidin
Reducing agents
Escherichia coli
2013
25 引用 (Scopus)

Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction

Teramoto, T., Fujikawa, Y., Kawaguchi, Y., Kurogi, K., Soejima, M., Adachi, R., Nakanishi, Y., Mishiro-Sato, E., Liu, M. C., Sakakibara, Y., Suiko, M., Kimura, M. & Kakuta, Y., 4 11 2013, : : Nature communications. 4, 1572.

研究成果: ジャーナルへの寄稿記事

sulfation
tyrosine
Tyrosine
Crystal structure
proteins
6 引用 (Scopus)
Pyrococcus horikoshii
Ribonuclease P
Fluorescence Resonance Energy Transfer
Chemical activation
RNA Precursors
12 引用 (Scopus)

The crystal structure of novel chondroitin lyase ODV-E66, a baculovirus envelope protein

Kawaguchi, Y., Sugiura, N., Kimata, K., Kimura, M. & Kakuta, Y., 12 11 2013, : : FEBS Letters. 587, 24, p. 3943-3948 6 p.

研究成果: ジャーナルへの寄稿記事

Chondroitin Lyases
Baculoviridae
Polysaccharide-Lyases
Crystal structure
Chondroitin
2012
7 引用 (Scopus)

A distinct binding mode of archaeal ribonuclease P proteins to RNA

Ishihara, M., Nishimoto, E., Yamashita, S., Kakuta, Y. & Kimura, M., 12 1 2012, : : Bioscience, Biotechnology and Biochemistry. 76, 12, p. 2335-2337 3 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
Oligoribonucleotides
RNA
Fluorescence Resonance Energy Transfer
3 引用 (Scopus)

Crystallization and X-ray diffraction analysis of chondroitin lyase from baculovirus: Envelope protein ODV-E66

Kawaguchi, Y., Sugiura, N., Onishi, M., Kimata, K., Kimura, M. & Kakuta, Y., 2 1 2012, : : Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 68, 2, p. 190-192 3 p.

研究成果: ジャーナルへの寄稿記事

Chondroitin Lyases
Chondroitin
Chondroitin Sulfates
Baculoviridae
Crystallization
21 引用 (Scopus)

Crystal structure of the rice branching enzyme I (BEI) in complex with maltopentaose

Chaen, K., Noguchi, J., Omori, T., Kakuta, Y. & Kimura, M., 8 3 2012, : : Biochemical and Biophysical Research Communications. 424, 3, p. 508-511 4 p.

研究成果: ジャーナルへの寄稿記事

Crystal structure
Carbohydrates
1,4-alpha-Glucan Branching Enzyme
Amylopectin
Amylases
2 引用 (Scopus)

Kinetics of iterative carbohydrate transfer to polysaccharide catalyzed by chondroitin polymerase on a highly sensitive flow-type 27 MHz quartz-crystal microbalance

Mori, T., Kodera, T., Yoshimine, H., Kakuta, Y., Sugiura, N., Kimata, K. & Okahata, Y., 6 11 2012, : : Chemistry - A European Journal. 18, 24, p. 7389-7393 5 p.

研究成果: ジャーナルへの寄稿記事

Chondroitin
Glucuronic Acid
Quartz crystal microbalances
Polysaccharides
Carbohydrates
2 引用 (Scopus)

Loss-of-function mutation in bi-functional marine bacterial sialyltransferase

Kajiwara, H., Katayama, S., Kakuta, Y., Okino, N., Ito, M., Mine, T. & Yamamoto, T., 10 1 2012, : : Bioscience, Biotechnology and Biochemistry. 76, 9, p. 1639-1644 6 p.

研究成果: ジャーナルへの寄稿記事

Sialyltransferases
Mutation
Neuraminidase
Amino Acids
Enzymes
8 引用 (Scopus)

Single-molecular enzymatic elongation of hyaluronan polymers visualized by high-speed atomic force microscopy

Mori, T., Hirose, A., Hagiwara, T., Ohtsuka, M., Kakuta, Y., Kimata, K. & Okahata, Y., 12 19 2012, : : Journal of the American Chemical Society. 134, 50, p. 20254-20257 4 p.

研究成果: ジャーナルへの寄稿記事

Atomic Force Microscopy
Hyaluronic Acid
Pasteurella multocida
Hyaluronic acid
Elongation
15 引用 (Scopus)

Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase

Yamamoto, K., Usuda, K., Kakuta, Y., Kimura, M., Higashiura, A., Nakagawa, A., Aso, Y. & Suzuki, M., 10 1 2012, : : Biochimica et Biophysica Acta - General Subjects. 1820, 10, p. 1469-1474 6 p.

研究成果: ジャーナルへの寄稿記事

Bombyx
Glutathione Transferase
Glutathione
Catalyst activity
Anopheles gambiae
6 引用 (Scopus)

Structural biology of the ribonuclease p in the hyperthermophilic archaeon pyrococcus horikoshii OT3

Kimura, M. & Kakuta, Y., 10 1 2012, Microorganisms in Sustainable Agriculture and Biotechnology. Springer Netherlands, 巻 9789400722149. p. 487-508 22 p.

研究成果: 著書/レポートタイプへの貢献

Pyrococcus horikoshii
Ribonuclease P
Archaea
Ribonucleases
RNA Precursors
5 引用 (Scopus)

Thermodynamic analysis of a multifunctional RNA-binding protein, PhoRpp38, in the hyperthermophilic archaeon Pyrococcus horikoshii OT3

Oshima, K., Nakashima, T., Kakuta, Y., Tsumoto, K. & Kimura, M., 6 29 2012, : : Bioscience, Biotechnology and Biochemistry. 76, 6, p. 1252-1255 4 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
RNA-Binding Proteins
Archaea
Thermodynamics
12 引用 (Scopus)

The structural basis for a coordinated reaction catalyzed by a bifunctional glycosyltransferase in chondroitin biosynthesis

Sobhany, M., Kakuta, Y., Sugiura, N., Kimata, K. & Negishi, M., 10 19 2012, : : Journal of Biological Chemistry. 287, 43, p. 36022-36028 7 p.

研究成果: ジャーナルへの寄稿記事

Chondroitin
Glycosyltransferases
Biosynthesis
Acetylgalactosamine
Glucuronic Acid
2011
9 引用 (Scopus)

Crystallographic survey of active sites of an unclassified glutathione transferase from Bombyx mori

Kakuta, Y., Usuda, K., Nakashima, T., Kimura, M., Aso, Y. & Yamamoto, K., 12 1 2011, : : Biochimica et Biophysica Acta - General Subjects. 1810, 12, p. 1355-1360 6 p.

研究成果: ジャーナルへの寄稿記事

Bombyx
Insecticides
Glutathione Transferase
Catalytic Domain
Glutathione
26 引用 (Scopus)

Crystal structure of the branching enzyme i (BEI) from Oryza sativa L with implications for catalysis and substrate binding

Noguchi, J., Chaen, K., Vu, N. T., Akasaka, T., Shimada, H., Nakashima, T., Nishi, A., Satoh, H., Omori, T., Kakuta, Y. & Kimura, M., 8 1 2011, : : Glycobiology. 21, 8, p. 1108-1116 9 p.

研究成果: ジャーナルへの寄稿記事

1,4-alpha-Glucan Branching Enzyme
Catalysis
Crystal structure
Substrates
Amylases
3 引用 (Scopus)

Molecular cloning, expression, and functional analysis of a predicted sulfotransferase STF9 from Mycobacterium avium

Hossain, M. M., Moriizumi, Y., Tanaka, S., Kimura, M. & Kakuta, Y., 4 1 2011, : : Molecular and cellular biochemistry. 350, 1-2, p. 155-162 8 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Mycobacterium avium
Functional analysis
Cloning
Molecular Cloning
11 引用 (Scopus)

Structural modeling of RNase P RNA of the hyperthermophilic archaeon Pyrococcus horikoshii OT3

Zwieb, C., Nakao, Y., Nakashima, T., Takagi, H., Goda, S., Andersen, E. S., Kakuta, Y. & Kimura, M., 10 28 2011, : : Biochemical and Biophysical Research Communications. 414, 3, p. 517-522 6 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
Archaea
RNA
Catalytic RNA
4 引用 (Scopus)

The contribution of peripheral stem-loops to the catalytic activity of archaeal RNase P RNa from Pyrococcus horikoshii OT3

Hara, T., Terada, A., Yamaguchi, H., Nakashima, T., Kakuta, Y. & Kimura, M., 5 16 2011, : : Bioscience, Biotechnology and Biochemistry. 75, 4, p. 816-819 4 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
Catalyst activity
RNA Precursors
Catalysis
2010
22 引用 (Scopus)

Glucuronyltransferase activity of KfiC from Escherichia coli strain K5 requires association of KfiA: KfiC and KfiA are essential enzymes for production of K5 polysaccharide, N-acetylheparosan

Sugiura, N., Baba, Y., Kawaguchi, Y., Iwatani, T., Suzuki, K., Kusakabe, T., Yamagishi, K., Kimata, K., Kakuta, Y. & Watanabe, H., 1 15 2010, : : Journal of Biological Chemistry. 285, 3, p. 1597-1606 10 p.

研究成果: ジャーナルへの寄稿記事

Glucuronosyltransferase
Heparitin Sulfate
Transferases
Escherichia coli
Association reactions
1 引用 (Scopus)

Structure of the newly found green turtle egg-white ribonuclease

Katekaew, S., Kuaprasert, B., Torikata, T., Kakuta, Y., Kimura, M., Yoneda, K. & Araki, T., 7 15 2010, : : Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 66, 7, p. 755-759 5 p.

研究成果: ジャーナルへの寄稿記事

turtles
Egg White
Pancreatic Ribonuclease
Turtles
eggs
6 引用 (Scopus)

The structural mechanism of the inhibition of archaeal RelE toxin by its cognate RelB antitoxin

Shinohara, M., Guo, J. X., Mori, M., Nakashima, T., Takagi, H., Nishimoto, E., Yamashita, S., Tsumoto, K., Kakuta, Y. & Kimura, M., 9 1 2010, : : Biochemical and Biophysical Research Communications. 400, 3, p. 346-351 6 p.

研究成果: ジャーナルへの寄稿記事

Antitoxins
Escherichia coli
Pyrococcus horikoshii
Archaea
Titration
29 引用 (Scopus)

Zebrafish as a model for the study of the phase II cytosolic sulfotransferases

Liu, T. A., Bhuiyan, S., Liu, M. Y., Sugahara, T., Sakakibara, Y., Suiko, M., Yasuda, S., Kakuta, Y., Kimura, M., Williams, F. E. & Liu, M. C., 7 1 2010, : : Current Drug Metabolism. 11, 6, p. 538-546 9 p.

研究成果: ジャーナルへの寄稿評論記事

Sulfotransferases
Zebrafish
Detoxification
Pharmaceutical Preparations
Xenobiotics
2009
43 引用 (Scopus)

Crystal structure of chondroitin polymerase from Escherichia coli K4

Osawa, T., Sugiura, N., Shimada, H., Hirooka, R., Tsuji, A., Shirakawa, T., Fukuyama, K., Kimura, M., Kimata, K. & Kakuta, Y., 1 2 2009, : : Biochemical and Biophysical Research Communications. 378, 1, p. 10-14 5 p.

研究成果: ジャーナルへの寄稿記事

Chondroitin
Uridine Diphosphate
Escherichia coli
Crystal structure
Elongation
22 引用 (Scopus)

Crystal structure of α/β-galactoside α2,3-sialyltransferase from a luminous marine bacterium, Photobacterium phosphoreum

Iwatani, T., Okino, N., Sakakura, M., Kajiwara, H., Takakura, Y., Kimura, M., Ito, M., Yamamoto, T. & Kakuta, Y., 6 18 2009, : : FEBS Letters. 583, 12, p. 2083-2087 5 p.

研究成果: ジャーナルへの寄稿記事

Photobacterium
Sialyltransferases
Galactosides
Bacteria
Crystal structure
6 引用 (Scopus)

Expression and functional analysis of a predicted atsg arylsulphatase identified from mycobacterium tuberculosis genomic data

Hossain, M. M., Kawarabayasi, Y., Kimura, M. & Kakuta, Y., 12 1 2009, : : Journal of biochemistry. 146, 6, p. 767-769 3 p.

研究成果: ジャーナルへの寄稿記事

Arylsulfatases
Functional analysis
Pathogens
Mycobacterium tuberculosis
Sulfatases

Induced-fit type ligand binding guided by free-rotatory Leu residue present in the 7th α-helix peptide in the estrogen-related receptor γ (ERRγ)

Matsushima, A., Okada, H., Liu, X., Tokunaga, T., Teramoto, T., Kakuta, Y. & Shimohigashi, Y., 2009, Peptide Science 2008. p. 521-522

研究成果: 著書/レポートタイプへの貢献章 (査読済み)

22 引用 (Scopus)

Mechanistic insights into the hydrolysis and synthesis of ceramide by neutral ceramidase

Inoue, T., Okino, N., Kakuta, Y., Hijikata, A., Okano, H., Goda, H. M., Tani, M., Sueyoshi, N., Kambayashi, K., Matsumura, H., Kai, Y. & Ito, M., 4 3 2009, : : Journal of Biological Chemistry. 284, 14, p. 9566-9577 12 p.

研究成果: ジャーナルへの寄稿記事

Neutral Ceramidase
Ceramides
Exotoxins
Hydrolysis
Ceramidases
4 引用 (Scopus)

On the similar spatial arrangement of active site residues in PAPS-dependent and phenolic sulfate-utilizing sulfotransferases

Teramoto, T., Adachi, R., Sakakibara, Y., Liu, M. C., Suiko, M., Kimura, M. & Kakuta, Y., 9 17 2009, : : FEBS Letters. 583, 18, p. 3091-3094 4 p.

研究成果: ジャーナルへの寄稿記事

arylsulfate sulfotransferase
Phosphoadenosine Phosphosulfate
Sulfotransferases
Sulfates
Catalytic Domain
14 引用 (Scopus)

Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate

Teramoto, T., Sakakibara, Y., Liu, M. C., Suiko, M., Kimura, M. & Kakuta, Y., 5 22 2009, : : Biochemical and Biophysical Research Communications. 383, 1, p. 83-87 5 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Crystal structure
Phosphoadenosine Phosphosulfate
Substrates
4-nitrophenol
2 引用 (Scopus)

Structural basis for the broad range substrate specificity of a novel mouse cytosolic sulfotransferase-mSULT1D1

Teramoto, T., Sakakibara, Y., Liu, M. C., Suiko, M., Kimura, M. & Kakuta, Y., 1 30 2009, : : Biochemical and Biophysical Research Communications. 379, 1, p. 76-80 5 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Naphthols
Substrate Specificity
Binding Sites
Sulfonation
34 引用 (Scopus)

Tamavidins - Novel avidin-like biotin-binding proteins from the Tamogitake mushroom

Takakura, Y., Tsunashima, M., Suzuki, J., Usami, S., Kakuta, Y., Okino, N., Ito, M. & Yamamoto, T., 3 1 2009, : : FEBS Journal. 276, 5, p. 1383-1397 15 p.

研究成果: ジャーナルへの寄稿記事

Avidin
Agaricales
Streptavidin
Biotin
Escherichia coli
2008
Signal Transducing Adaptor Proteins
Biological Transport
Glucosylceramidase
Glucosylceramides
Gaucher Disease
16 引用 (Scopus)

Biochemical and crystallographic characterization of the starch branching enzyme I (BEI) from Oryza sativa L

Vu, N. T., Shimada, H., Kakuta, Y., Nakashima, T., Ida, H., Omori, T., Nishi, A., Satoh, H. & Kimura, M., 12 1 2008, : : Bioscience, Biotechnology and Biochemistry. 72, 11, p. 2858-2866 9 p.

研究成果: ジャーナルへの寄稿記事

1,4-alpha-Glucan Branching Enzyme
Amylopectin
Amylases
Enzymes
Amylose
15 引用 (Scopus)

Crystal structure and functional analysis of an archaeal chromatin protein alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3

Hada, K., Nakashima, T., Osawa, T., Shimada, H., Kakuta, Y. & Kimura, M., 4 7 2008, : : Bioscience, Biotechnology and Biochemistry. 72, 3, p. 749-758 10 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Archaeal Proteins
Functional analysis
Archaea
Ribonuclease P
6 引用 (Scopus)

Crystal structure of an archaeal Ski2p-like protein from Pyrococcus horikoshii OT3

Zhang, X., Nakashima, T., Kakuta, Y., Yao, M., Tanaka, I. & Kimura, M., 1 1 2008, : : Protein Science. 17, 1, p. 136-145 10 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
RNA Helicases
Archaea
RNA Stability
Escherichia coli
3 引用 (Scopus)

Crystal structure of mSULT1D1, a mouse catecholamine sulfotransferase

Teramoto, T., Sakakibara, Y., Inada, K., Kurogi, K., Liu, M. C., Suiko, M., Kimura, M. & Kakuta, Y., 11 26 2008, : : FEBS Letters. 582, 28, p. 3909-3914 6 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Catecholamines
Dopamine
Arylsulfotransferase
Crystal structure
18 引用 (Scopus)

Crystal structure of the covalent intermediate of human cytosolic β-glucosidase

Noguchi, J., Hayashi, Y., Baba, Y., Okino, N., Kimura, M., Ito, M. & Kakuta, Y., 9 26 2008, : : Biochemical and Biophysical Research Communications. 374, 3, p. 549-552 4 p.

研究成果: ジャーナルへの寄稿記事

Glucosidases
Lactase-Phlorizin Hydrolase
Crystal structure
Glucosylceramides
Glucose
51 引用 (Scopus)
Vibrionaceae
Photobacterium
Sialyltransferases
Cytidine Monophosphate
Lactose
54 引用 (Scopus)

ERRγ tethers strongly bisphenol A and 4-α-cumylphenol in an induced-fit manner

Matsushima, A., Teramoto, T., Okada, H., Liu, X., Tokunaga, T., Kakuta, Y. & Shimohigashi, Y., 8 29 2008, : : Biochemical and Biophysical Research Communications. 373, 3, p. 408-413 6 p.

研究成果: ジャーナルへの寄稿記事

Estrogen Receptors
Estrogens
Phenol
Hydroxyl Radical
Crystal structure