Pureに変更を加えた場合、すぐここに表示されます。

研究成果 1994 2017

  • 2886 引用
  • 29 h指数
  • 92 記事
  • 3 評論記事
  • 1
  • 1 章 (査読済み)
2008
37 引用 (Scopus)

Structure of an Archaeal Homolog of the Human Protein Complex Rpp21-Rpp29 That Is a Key Core Component for the Assembly of Active Ribonuclease P

Honda, T., Kakuta, Y., Kimura, K., Saho, J. & Kimura, M., 12 19 2008, : : Journal of Molecular Biology. 384, 3, p. 652-662 11 p.

研究成果: ジャーナルへの寄稿記事

Ribonuclease P
Pyrococcus horikoshii
RNA Precursors
Proteins
RNA
21 引用 (Scopus)

The chondroitin polymerase K4CP and the molecular mechanism of selective bindings of donor substrates to two active sites

Sobhany, M., Kakuta, Y., Sugiura, N., Kimata, K. & Negishi, M., 11 21 2008, : : Journal of Biological Chemistry. 283, 47, p. 32328-32333 6 p.

研究成果: ジャーナルへの寄稿記事

Chondroitin
Uridine Diphosphate
Catalytic Domain
Substrates
Polymerization
17 引用 (Scopus)

Tributyltin-binding protein type 1 has a distinctive lipocalin-like structure and is involved in the excretion of tributyltin in Japanese flounder, Paralichthys olivaceus

Satone, H., Oshima, Y., Shimasaki, Y., Tawaratsumida, T., Oba, Y., Takahashi, E., Kitano, T., Kawabata, S-I., Kakuta, Y. & Honjo, T., 12 11 2008, : : Aquatic Toxicology. 90, 4, p. 292-299 8 p.

研究成果: ジャーナルへの寄稿記事

Lipocalins
Flounder
Paralichthys olivaceus
tributyltin
excretion
2007
58 引用 (Scopus)
Chitinases
Muramidase
Tapes
Crystal structure
Substrates
65 引用 (Scopus)

Klotho-related protein is a novel cytosolic neutral β- glycosylceramidase

Hayashi, Y., Okino, N., Kakuta, Y., Shikanai, T., Tani, M., Narimatsu, H. & Ito, M., 10 19 2007, : : Journal of Biological Chemistry. 282, 42, p. 30889-30900 12 p.

研究成果: ジャーナルへの寄稿記事

Lactase-Phlorizin Hydrolase
Glucosylceramides
Proteins
Enzymes
Substrates
5 引用 (Scopus)
Photobacterium
Sialyltransferases
Crystallization
purification
Purification
141 引用 (Scopus)

Structural evidence for endocrine disruptor bisphenol A binding to human nuclear receptor ERRγ

Matsushima, A., Kakuta, Y., Teramoto, T., Koshiba, T., Liu, X., Okada, H., Tokunaga, T., Kawabata, S-I., Kimura, M. & Shimohigashi, Y., 10 1 2007, : : Journal of biochemistry. 142, 4, p. 517-524 8 p.

研究成果: ジャーナルへの寄稿記事

Endocrine Disruptors
Cytoplasmic and Nuclear Receptors
Estrogen Receptors
Estrogens
Ligands
2006
54 引用 (Scopus)

A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3

Fukuhara, H., Kifusa, M., Watanabe, M., Terada, A., Honda, T., Numata, T., Kakuta, Y. & Kimura, M., 5 12 2006, : : Biochemical and Biophysical Research Communications. 343, 3, p. 956-964 9 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
Protein Subunits
Temperature
Ribosomal Proteins
53 引用 (Scopus)
Pyrococcus horikoshii
Archaeal Proteins
Ribonuclease P
Holoenzymes
Protein Subunits
5 引用 (Scopus)

Crystal structures of the Nicotiana glutinosa ribonuclease NT in complex with nucleoside monophosphates

Kawano, S., Kakuta, Y., Nakashima, T. & Kimura, M., 9 1 2006, : : Journal of biochemistry. 140, 3, p. 375-381 7 p.

研究成果: ジャーナルへの寄稿記事

Ribonucleases
Nucleosides
Tobacco
Crystal structure
Guanosine Monophosphate
2005
130 引用 (Scopus)

Crystal structure of archaeal toxin-antitoxin RelE-RelB complex with implications for toxin activity and antitoxin effects

Takagi, H., Kakuta, Y., Okada, T., Yao, M., Tanaka, I. & Kimura, M., 12 1 2005, : : Nature Structural and Molecular Biology. 12, 4, p. 327-331 5 p.

研究成果: ジャーナルへの寄稿記事

Antitoxins
Pyrococcus horikoshii
Archaea
Ribonucleases
Site-Directed Mutagenesis
37 引用 (Scopus)

Crystal structure of a ribonuclease P protein Ph1601p from Pyrococcus horikoshii OT3: An archaeal homologue of human nuclear ribonuclease P protein Rpp21

Kakuta, Y., Ishimatsu, I., Numata, T., Kimura, K., Yao, M., Tanaka, I. & Kimura, M., 9 13 2005, : : Biochemistry. 44, 36, p. 12086-12093 8 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
Zinc
Crystal structure
RNA Precursors
20 引用 (Scopus)

Crystal structure of Escherichia coli YfhJ protein, a member of the ISC machinery involved in assembly of iron-sulfur clusters

Shimomura, Y., Takahashi, Y., Kakuta, Y. & Fukuyama, K., 8 15 2005, : : Proteins: Structure, Function and Genetics. 60, 3, p. 566-569 4 p.

研究成果: ジャーナルへの寄稿記事

Iron-Sulfur Proteins
Ferredoxins
Protein Conformation
Molecular Models
DNA Primers
48 引用 (Scopus)

Crystal structure of the alginate (Poly α-L-guluronate) lyase from Corynebacterium sp. at 1.2 Å resolution

Osawa, T., Matsubara, Y., Muramatsu, T., Kimura, M. & Kakuta, Y., 2 4 2005, : : Journal of Molecular Biology. 345, 5, p. 1111-1118 8 p.

研究成果: ジャーナルへの寄稿記事

Corynebacterium
Lyases
Bromides
Catalytic Domain
Ions
2 引用 (Scopus)
tuberculosis
Sulfotransferases
Mycobacterium tuberculosis
purification
X-Ray Diffraction
2004
5 引用 (Scopus)

Amino acids conserved at the C-terminal half of the ribonuclease T2 family contribute to protein stability of the enzymes

Kimura, K., Numata, T., Kakuta, Y. & Kimura, M., 8 1 2004, : : Bioscience, Biotechnology and Biochemistry. 68, 8, p. 1748-1757 10 p.

研究成果: ジャーナルへの寄稿記事

ribonuclease T(2)
Protein Stability
Amino Acids
Enzymes
Momordica charantia
37 引用 (Scopus)

Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: An archaeal homolog of eukaryotic ribonuclease P protein Rpp29

Numata, T., Ishimatsu, I., Kakuta, Y., Tanaka, I. & Kimura, M., 9 2004, : : RNA. 10, 9, p. 1423-1432 10 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
RNA
Binding Sites
Proteins
18 引用 (Scopus)
Eukaryotic Initiation Factor-2B
Pyrococcus horikoshii
Eukaryotic Initiation Factors
Peptide Initiation Factors
Archaea
41 引用 (Scopus)

Crystal structure of the ribonuclease P protein Ph1877p from hyperthermophilic archaeon Pyrococcus horikoshii OT3

Takagi, H., Watanabe, M., Kakuta, Y., Kamachi, R., Numata, T., Tanaka, I. & Kimura, M., 7 2 2004, : : Biochemical and Biophysical Research Communications. 319, 3, p. 787-794 8 p.

研究成果: ジャーナルへの寄稿記事

Pyrococcus horikoshii
Ribonuclease P
Archaea
Crystal structure
RNA Precursors
2003
21 引用 (Scopus)
Thermus thermophilus
NADP
Oxidoreductases
benzoquinone
Alcohol Dehydrogenase
11 引用 (Scopus)

Crystal structures of the ribonuclease MC1 mutants N71T and N71S in complex with 5′-GMP: Structural basis for alterations in substrate specificity

Numata, T., Suzuki, A., Kakuta, Y., Kimura, K., Yao, M., Tanaka, I., Yoshida, Y., Ueda, T. & Kimura, M., 5 13 2003, : : Biochemistry. 42, 18, p. 5270-5278 9 p.

研究成果: ジャーナルへの寄稿記事

Guanosine Monophosphate
ribonuclease T(2)
Guanine
Substrate Specificity
Guanosine
13 引用 (Scopus)

Heparan sulphate N-sulphotransferase activity: Reaction mechanism and substrate recognition

Kakuta, Y., Li, L., Pedersen, L. C., Pedersen, L. G. & Negishi, M., 4 1 2003, : : Biochemical Society Transactions. 31, 2, p. 331-334 4 p.

研究成果: ジャーナルへの寄稿記事

Glucosamine
Sulfates
Phosphoadenosine Phosphosulfate
Trisaccharides
Sulfotransferases
2 引用 (Scopus)
Sulfate Adenylyltransferase
Adenosine Phosphosulfate
Thermus thermophilus
adenosine triphosphate
Crystallization
2002
28 引用 (Scopus)
Ferredoxins
Bacillus
R388
Synchrotrons
Temperature
57 引用 (Scopus)

Crystal structure of rat apo-heme oxygenase-1 (HO-1): Mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms

Sugishima, M., Sakamoto, H., Kakuta, Y., Omata, Y., Hayashi, S., Noguchi, M. & Fukuyama, K., 6 11 2002, : : Biochemistry. 41, 23, p. 7293-7300 8 p.

研究成果: ジャーナルへの寄稿記事

Heme Oxygenase-1
Heme
Rats
Crystal structure
Heme Oxygenase (Decyclizing)
6 引用 (Scopus)

Guanine binding site of the Nicotiana glutinosa ribonuclease NW revealed by X-ray crystallography

Kawano, S., Kakuta, Y. & Kimura, M., 12 24 2002, : : Biochemistry. 41, 51, p. 15195-15202 8 p.

研究成果: ジャーナルへの寄稿記事

X ray crystallography
X Ray Crystallography
Guanine
Ribonucleases
Tobacco

Structure and reaction mechanism of heme oxygenase-1

Sakamoto, H., Sugishima, M., Omata, Y., Kakuta, Y., Fukuyama, K., Palmer, G. & Noguchi, M., 11 1 2002, : : International Congress Series. 1233, C, p. 177-183 7 p.

研究成果: ジャーナルへの寄稿記事

Heme Oxygenase-1
Heme
Heme Oxygenase (Decyclizing)
Iron
Carbon Monoxide
70 引用 (Scopus)
Exonucleases
Ions
Single-Stranded DNA
DNA Repair
Genetic Recombination
2001

Crystal Structure-Based Analysis of Human Glucuronyltransferase 1

Pedersen, L. C., Darden, T. A., Kakuta, Y. & Negishi, M., 1 1 2001, : : Trends in Glycoscience and Glycotechnology. 13, 70, p. 121-129 9 p.

研究成果: ジャーナルへの寄稿評論記事

Glucuronosyltransferase
Crystal structure
Binding Sites
Chondroitin
Glycosyltransferases
68 引用 (Scopus)

Crystal structure of Escherichia coli Fdx, an adrenodoxin-type ferredoxin involved in the assembly of iron-sulfur clusters

Kakuta, Y., Horio, T., Takahashi, Y. & Fukuyama, K., 9 18 2001, : : Biochemistry. 40, 37, p. 11007-11012 6 p.

研究成果: ジャーナルへの寄稿記事

Adrenodoxin
Ferredoxins
Sulfur
Escherichia coli
Iron
19 引用 (Scopus)

Overexpression, purification and characterization of RecJ protein from Thermus thermophilus HB8 and its core domain

Yamagata, A., Masui, R., Kakuta, Y., Kuramitsu, S. & Fukuyama, K., 11 15 2001, : : Nucleic Acids Research. 29, 22, p. 4617-4624 8 p.

研究成果: ジャーナルへの寄稿記事

Thermus thermophilus
Proteins
Thermus
Escherichia
Exonucleases
221 引用 (Scopus)

Structure and function of sulfotransferases

Negishi, M., Pedersen, L. G., Petrotchenko, E., Shevtsov, S., Gorokhov, A., Kakuta, Y. & Pedersen, L. C., 6 15 2001, : : Archives of Biochemistry and Biophysics. 390, 2, p. 149-157 9 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Phosphoadenosine Phosphosulfate
Sulfates
Crystal structure
X-Rays
2000
130 引用 (Scopus)

Crystal structure of rat heme oxygenase-1 in complex with heme

Sugishima, M., Omata, Y., Kakuta, Y., Sakamoto, H., Noguchi, M. & Fukuyama, K., 4 7 2000, : : FEBS Letters. 471, 1, p. 61-66 6 p.

研究成果: ジャーナルへの寄稿記事

Heme Oxygenase-1
Heme
Rats
Crystal structure
Ligands
10 引用 (Scopus)

Structure-function modeling of the interactions of N-alkyl-N-hydroxyanilines with rat hepatic aryl sulfotransferase IV

King, R. S., Sharma, V., Pedersen, L. C., Kakuta, Y., Negishi, M. & Duffel, M. W., 12 1 2000, : : Chemical Research in Toxicology. 13, 12, p. 1251-1258 8 p.

研究成果: ジャーナルへの寄稿記事

Arylsulfotransferase
Aminophenols
Rats
Liver
Sulfotransferases
1999
17 引用 (Scopus)

3'-Phosphoadenosine 5'-phosphosulfate binding site of flavonol 3- sulfotransferase studied by affinity chromatography and 31P NMR

Marsolais, F., Laviolette, M., Kakuta, Y., Negishi, M., Pedersen, L. C., Auger, M. & Varin, L., 3 30 1999, : : Biochemistry. 38, 13, p. 4066-4071 6 p.

研究成果: ジャーナルへの寄稿記事

Phosphoadenosine Phosphosulfate
Affinity chromatography
Affinity Chromatography
Binding Sites
Nuclear magnetic resonance
7 引用 (Scopus)

A quantum mechanical study of the transfer of biological sulfate

Bartolotti, L., Kakuta, Y., Pedersen, L., Negishi, M. & Pedersen, L., 4 2 1999, : : Journal of Molecular Structure: THEOCHEM. 461-462, p. 105-111 7 p.

研究成果: ジャーナルへの寄稿記事

Biological Phenomena
Histidine
Sulfates
Protons
Estradiol
91 引用 (Scopus)

Crystal structure of human catecholamine sulfotransferase

Bidwell, L. M., McManus, M. E., Gaedigk, A., Kakuta, Y., Negishi, M., Pedersen, L. & Martin, J. L., 10 29 1999, : : Journal of Molecular Biology. 293, 3, p. 521-530 10 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Catecholamines
Catalytic Domain
Dietary Proteins
Enzymes
108 引用 (Scopus)

Crystal structure of the sulfotransferase domain of human heparan sulfate N-deacetylase/N-sulfotransferase 1

Kakuta, Y., Sueyoshi, T., Negishi, M. & Pedersen, L. C., 4 16 1999, : : Journal of Biological Chemistry. 274, 16, p. 10673-10676 4 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Crystal structure
Phosphates
Bearings (structural)
Heparitin Sulfate
43 引用 (Scopus)

Substrate gating confers steroid specificity to estrogen sulfotransferase

Petrotchenko, E. V., Doerflein, M. E., Kakuta, Y., Pedersen, L. C. & Negishi, M., 10 15 1999, : : Journal of Biological Chemistry. 274, 42, p. 30019-30022 4 p.

研究成果: ジャーナルへの寄稿記事

Dehydroepiandrosterone
Steroids
Substrates
Estrogens
Cats
1998
45 引用 (Scopus)

A role of Lys614 in the sulfotransferase activity of human heparan sulfate N-deacetylase/N-sulfotransferase

Sueyoshi, T., Kakuta, Y., Pedersen, L. C., Wall, F. E., Pedersen, L. G. & Negishi, M., 8 21 1998, : : FEBS Letters. 433, 3, p. 211-214 4 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Human Activities
Phosphoadenosine Phosphosulfate
Rats
Catalysis
131 引用 (Scopus)

Conserved structural motifs in the sulfotransferase family

Kakuta, Y., Pedersen, L. G., Pedersen, L. C. & Negishi, M., 12 1 1998, : : Trends in Biochemical Sciences. 23, 4, p. 129-130 2 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
26 引用 (Scopus)

Mouse steroid sulfotransferases. Substrate specificity and preliminary X-ray crystallographic analysis

Kakuta, Y., Pedersen, L. C., Chae, K., Song, W. C., Leblanc, D., London, R., Carter, C. W. & Negishi, M., 2 1 1998, : : Biochemical Pharmacology. 55, 3, p. 313-317 5 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Substrate Specificity
Diethylstilbestrol
X-Rays
X rays
104 引用 (Scopus)

The sulfuryl transfer mechanism. Crystal structure of a vanadate complex of estrogen sulfotransferase and mutational analysis

Kakuta, Y., Petrotchenko, E. V., Pedersen, L. C. & Negishi, M., 10 16 1998, : : Journal of Biological Chemistry. 273, 42, p. 27325-27330 6 p.

研究成果: ジャーナルへの寄稿記事

Vanadates
Crystal structure
Molecules
Phenol
Phosphoadenosine Phosphosulfate
1997
220 引用 (Scopus)

Crystal structure of estrogen sulphotransferase

Kakuta, Y., Pedersen, L. G., Carter, C. W., Negishi, M. & Pedersen, L. C., 11 19 1997, : : Nature Structural Biology. 4, 11, p. 904-908 5 p.

研究成果: ジャーナルへの寄稿記事

Sulfotransferases
Estradiol
Phosphotransferases
Nucleotides
Crystal structure
1996
40 引用 (Scopus)

Glycine-15 in the bend between two α-helices can explain the thermostability of DNA binding protein HU from Bacillus stearothermophilus

Kawamura, S., Kakuta, Y., Tanaka, I., Hikichi, K., Kuhara, S., Yamasaki, N. & Kimura, M., 1 30 1996, : : Biochemistry. 35, 4, p. 1195-1200 6 p.

研究成果: ジャーナルへの寄稿記事

Helix-Turn-Helix Motifs
Geobacillus stearothermophilus
DNA-Binding Proteins
Bacilli
Glycine
1995
10 引用 (Scopus)

1H NMR study on substituent distribution of cellulose diacetate

Hikichi, K., Kakuta, Y. & Katoh, T., 1 1 1995, : : Polymer Journal. 27, 7, p. 659-663 5 p.

研究成果: ジャーナルへの寄稿記事

Glucose
Cellulose
Nuclear magnetic resonance
Diacetyl
cellulose diacetate
1994
4 引用 (Scopus)

13C-NMR relaxation study on mobility of the DNA-binding arm of HU

Kakuta, Y., Hojo, H., Aimoto, S., Tanaka, I. & Hikichi, K., 1 1 1994, : : Journal of biochemistry. 116, 5, p. 1153-1155 3 p.

研究成果: ジャーナルへの寄稿記事

Nuclear magnetic resonance
DNA
Nuclear magnetic resonance spectroscopy
Carbon-13 Magnetic Resonance Spectroscopy
Magnetic Resonance Spectroscopy