A generic representation format of physiological experimental protocols for computer simulation using ontology

Takao Shimayoshi, Akira Amano, Tetsuya Matsuda

研究成果: Chapter in Book/Report/Conference proceedingConference contribution

4 被引用数 (Scopus)

抄録

For computer simulations of physiological experiments using physiological models, a machine-readable format of experimental protocols is effective. Here, we propose an XML-based language, PEPML (Physiological Experimental Protocol Markup Language). In the PEPML, conditions and procedures of an experimental protocol are procedurally described as a list of events, each of which consists of a condition for execution and an action to be executed. Since variables used in a protocol can be specified using an ontology, the protocol can be applied to various models without editing tasks. The PEPML allows both application of multiple protocols to a single model and application of a single protocol to multiple models. This feature facilitates the efficient simulation for verifications, comparisons and utilizations of physiological models.

本文言語英語
ホスト出版物のタイトル29th Annual International Conference of IEEE-EMBS, Engineering in Medicine and Biology Society, EMBC'07
ページ382-385
ページ数4
DOI
出版ステータス出版済み - 12 1 2007
外部発表はい
イベント29th Annual International Conference of IEEE-EMBS, Engineering in Medicine and Biology Society, EMBC'07 - Lyon, フランス
継続期間: 8 23 20078 26 2007

その他

その他29th Annual International Conference of IEEE-EMBS, Engineering in Medicine and Biology Society, EMBC'07
国/地域フランス
CityLyon
Period8/23/078/26/07

All Science Journal Classification (ASJC) codes

  • 信号処理
  • 生体医工学
  • コンピュータ ビジョンおよびパターン認識
  • 健康情報学

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