A software environment for simulators suitable for complex biological analysis

T. Shimayoshi, K. Hori, J. Y. Lu, A. Amano, T. Matsuda

研究成果: ジャーナルへの寄稿Conference article

2 引用 (Scopus)

抄録

In order to understand the function of biological elements and their interactions, computer analysis and simulation is an essential technique. For higher research efficiency, it is important to provide a system framework for constructing biological simulation systems that handle multiple phenomena. This paper proposes "DynaBioS", a comprehensive system framework for complex biological simulations. This framework consists of three main features, a component-based architecture, a customizable system operation, and an exchangeable model set. The system based on DynaBioS consists of a Simulation Core and System Components. The System Components are sub-simulators for individual functional factors and utility modules corresponding to specific information technologies. The Simulation Core manages and controls all components, in accordance with a Simulation Scenario and a Simulation Model. The DynaBioS makes it possible to implement different simulation systems by combining individual functional components, specific interactions and different simulation models. The versatility of DynaBioS is shown by two examples, a heart pumping simulator and a parameter optimization system for physiological models.

元の言語英語
ページ(範囲)3047-3050
ページ数4
ジャーナルAnnual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings
26 IV
出版物ステータス出版済み - 12 1 2004
外部発表Yes
イベントConference Proceedings - 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2004 - San Francisco, CA, 米国
継続期間: 9 1 20049 5 2004

Fingerprint

Computer Simulation
Software
Simulators
Technology
Research
Physiological models
Information technology

All Science Journal Classification (ASJC) codes

  • Signal Processing
  • Biomedical Engineering
  • Computer Vision and Pattern Recognition
  • Health Informatics

これを引用

A software environment for simulators suitable for complex biological analysis. / Shimayoshi, T.; Hori, K.; Lu, J. Y.; Amano, A.; Matsuda, T.

:: Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings, 巻 26 IV, 01.12.2004, p. 3047-3050.

研究成果: ジャーナルへの寄稿Conference article

@article{f94c25ad79224833ba3dfc4d71bc10c3,
title = "A software environment for simulators suitable for complex biological analysis",
abstract = "In order to understand the function of biological elements and their interactions, computer analysis and simulation is an essential technique. For higher research efficiency, it is important to provide a system framework for constructing biological simulation systems that handle multiple phenomena. This paper proposes {"}DynaBioS{"}, a comprehensive system framework for complex biological simulations. This framework consists of three main features, a component-based architecture, a customizable system operation, and an exchangeable model set. The system based on DynaBioS consists of a Simulation Core and System Components. The System Components are sub-simulators for individual functional factors and utility modules corresponding to specific information technologies. The Simulation Core manages and controls all components, in accordance with a Simulation Scenario and a Simulation Model. The DynaBioS makes it possible to implement different simulation systems by combining individual functional components, specific interactions and different simulation models. The versatility of DynaBioS is shown by two examples, a heart pumping simulator and a parameter optimization system for physiological models.",
author = "T. Shimayoshi and K. Hori and Lu, {J. Y.} and A. Amano and T. Matsuda",
year = "2004",
month = "12",
day = "1",
language = "English",
volume = "26 IV",
pages = "3047--3050",
journal = "Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings",
issn = "1557-170X",
publisher = "Institute of Electrical and Electronics Engineers Inc.",

}

TY - JOUR

T1 - A software environment for simulators suitable for complex biological analysis

AU - Shimayoshi, T.

AU - Hori, K.

AU - Lu, J. Y.

AU - Amano, A.

AU - Matsuda, T.

PY - 2004/12/1

Y1 - 2004/12/1

N2 - In order to understand the function of biological elements and their interactions, computer analysis and simulation is an essential technique. For higher research efficiency, it is important to provide a system framework for constructing biological simulation systems that handle multiple phenomena. This paper proposes "DynaBioS", a comprehensive system framework for complex biological simulations. This framework consists of three main features, a component-based architecture, a customizable system operation, and an exchangeable model set. The system based on DynaBioS consists of a Simulation Core and System Components. The System Components are sub-simulators for individual functional factors and utility modules corresponding to specific information technologies. The Simulation Core manages and controls all components, in accordance with a Simulation Scenario and a Simulation Model. The DynaBioS makes it possible to implement different simulation systems by combining individual functional components, specific interactions and different simulation models. The versatility of DynaBioS is shown by two examples, a heart pumping simulator and a parameter optimization system for physiological models.

AB - In order to understand the function of biological elements and their interactions, computer analysis and simulation is an essential technique. For higher research efficiency, it is important to provide a system framework for constructing biological simulation systems that handle multiple phenomena. This paper proposes "DynaBioS", a comprehensive system framework for complex biological simulations. This framework consists of three main features, a component-based architecture, a customizable system operation, and an exchangeable model set. The system based on DynaBioS consists of a Simulation Core and System Components. The System Components are sub-simulators for individual functional factors and utility modules corresponding to specific information technologies. The Simulation Core manages and controls all components, in accordance with a Simulation Scenario and a Simulation Model. The DynaBioS makes it possible to implement different simulation systems by combining individual functional components, specific interactions and different simulation models. The versatility of DynaBioS is shown by two examples, a heart pumping simulator and a parameter optimization system for physiological models.

UR - http://www.scopus.com/inward/record.url?scp=11144276016&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=11144276016&partnerID=8YFLogxK

M3 - Conference article

AN - SCOPUS:11144276016

VL - 26 IV

SP - 3047

EP - 3050

JO - Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings

JF - Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings

SN - 1557-170X

ER -