Analysis of expressed sequence tags in prothallia of Adiantum capillus-veneris

Daisuke Yamauchi, Keita Sutoh, Hiromi Kanegae, Tatsuya Horiguchi, Ken Matsuoka, Hiroo Fukuda, Masamitsu Wada

研究成果: ジャーナルへの寄稿記事

18 引用 (Scopus)

抄録

The analysis of expressed sequences from a diverse set of plant species has fueled the increase in understanding of the complex molecular mechanisms underlying plant growth regulation. While representative data sets can be found for the major branches of plant evolution, fern species data are lacking. To further the availability of genetic information in pteridophytes, a normalized cDNA library of Adiantum capillus-veneris was constructed from prothallia grown under white light. A total of 10,420 expressed sequence tags (ESTs) were obtained and clustering of these sequences resulted in 7,100 nonredundant clusters. Of these, 1,608 EST clusters were found to be similar to sequences of known function and 1,092 EST clusters showed similarity to sequences of unknown function. Given the usefulness of Adiantum for developmental studies, the sequence data represented in this report stand to make a significant contribution to the understanding of plant growth regulation, particularly for pteridophytes.

元の言語英語
ページ(範囲)223-227
ページ数5
ジャーナルJournal of Plant Research
118
発行部数3
DOI
出版物ステータス出版済み - 7 1 2005
外部発表Yes

Fingerprint

Adiantum capillus-veneris
expressed sequence tags
ferns and fern allies
plant growth
Adiantum
white light
cDNA libraries

All Science Journal Classification (ASJC) codes

  • Plant Science

これを引用

Analysis of expressed sequence tags in prothallia of Adiantum capillus-veneris. / Yamauchi, Daisuke; Sutoh, Keita; Kanegae, Hiromi; Horiguchi, Tatsuya; Matsuoka, Ken; Fukuda, Hiroo; Wada, Masamitsu.

:: Journal of Plant Research, 巻 118, 番号 3, 01.07.2005, p. 223-227.

研究成果: ジャーナルへの寄稿記事

Yamauchi, D, Sutoh, K, Kanegae, H, Horiguchi, T, Matsuoka, K, Fukuda, H & Wada, M 2005, 'Analysis of expressed sequence tags in prothallia of Adiantum capillus-veneris', Journal of Plant Research, 巻. 118, 番号 3, pp. 223-227. https://doi.org/10.1007/s10265-005-0209-3
Yamauchi, Daisuke ; Sutoh, Keita ; Kanegae, Hiromi ; Horiguchi, Tatsuya ; Matsuoka, Ken ; Fukuda, Hiroo ; Wada, Masamitsu. / Analysis of expressed sequence tags in prothallia of Adiantum capillus-veneris. :: Journal of Plant Research. 2005 ; 巻 118, 番号 3. pp. 223-227.
@article{e78d03ff8b704885bea2298d9e447d89,
title = "Analysis of expressed sequence tags in prothallia of Adiantum capillus-veneris",
abstract = "The analysis of expressed sequences from a diverse set of plant species has fueled the increase in understanding of the complex molecular mechanisms underlying plant growth regulation. While representative data sets can be found for the major branches of plant evolution, fern species data are lacking. To further the availability of genetic information in pteridophytes, a normalized cDNA library of Adiantum capillus-veneris was constructed from prothallia grown under white light. A total of 10,420 expressed sequence tags (ESTs) were obtained and clustering of these sequences resulted in 7,100 nonredundant clusters. Of these, 1,608 EST clusters were found to be similar to sequences of known function and 1,092 EST clusters showed similarity to sequences of unknown function. Given the usefulness of Adiantum for developmental studies, the sequence data represented in this report stand to make a significant contribution to the understanding of plant growth regulation, particularly for pteridophytes.",
author = "Daisuke Yamauchi and Keita Sutoh and Hiromi Kanegae and Tatsuya Horiguchi and Ken Matsuoka and Hiroo Fukuda and Masamitsu Wada",
year = "2005",
month = "7",
day = "1",
doi = "10.1007/s10265-005-0209-3",
language = "English",
volume = "118",
pages = "223--227",
journal = "Journal of Plant Research",
issn = "0918-9440",
publisher = "Springer Japan",
number = "3",

}

TY - JOUR

T1 - Analysis of expressed sequence tags in prothallia of Adiantum capillus-veneris

AU - Yamauchi, Daisuke

AU - Sutoh, Keita

AU - Kanegae, Hiromi

AU - Horiguchi, Tatsuya

AU - Matsuoka, Ken

AU - Fukuda, Hiroo

AU - Wada, Masamitsu

PY - 2005/7/1

Y1 - 2005/7/1

N2 - The analysis of expressed sequences from a diverse set of plant species has fueled the increase in understanding of the complex molecular mechanisms underlying plant growth regulation. While representative data sets can be found for the major branches of plant evolution, fern species data are lacking. To further the availability of genetic information in pteridophytes, a normalized cDNA library of Adiantum capillus-veneris was constructed from prothallia grown under white light. A total of 10,420 expressed sequence tags (ESTs) were obtained and clustering of these sequences resulted in 7,100 nonredundant clusters. Of these, 1,608 EST clusters were found to be similar to sequences of known function and 1,092 EST clusters showed similarity to sequences of unknown function. Given the usefulness of Adiantum for developmental studies, the sequence data represented in this report stand to make a significant contribution to the understanding of plant growth regulation, particularly for pteridophytes.

AB - The analysis of expressed sequences from a diverse set of plant species has fueled the increase in understanding of the complex molecular mechanisms underlying plant growth regulation. While representative data sets can be found for the major branches of plant evolution, fern species data are lacking. To further the availability of genetic information in pteridophytes, a normalized cDNA library of Adiantum capillus-veneris was constructed from prothallia grown under white light. A total of 10,420 expressed sequence tags (ESTs) were obtained and clustering of these sequences resulted in 7,100 nonredundant clusters. Of these, 1,608 EST clusters were found to be similar to sequences of known function and 1,092 EST clusters showed similarity to sequences of unknown function. Given the usefulness of Adiantum for developmental studies, the sequence data represented in this report stand to make a significant contribution to the understanding of plant growth regulation, particularly for pteridophytes.

UR - http://www.scopus.com/inward/record.url?scp=23744463248&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=23744463248&partnerID=8YFLogxK

U2 - 10.1007/s10265-005-0209-3

DO - 10.1007/s10265-005-0209-3

M3 - Article

C2 - 15940394

AN - SCOPUS:23744463248

VL - 118

SP - 223

EP - 227

JO - Journal of Plant Research

JF - Journal of Plant Research

SN - 0918-9440

IS - 3

ER -