Correction

Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053)

Mami Tanaka, Shoko Endo, Fumihito Kotake, Nurhidayu Al-Saari, A. K.M.Rohul Amin, Gao Feng, Sayaka Mino, Hidetaka Doi, Yoshitoshi Ogura, Tetsuya Hayashi, Wataru Suda, Masahira Hattori, Isao Yumoto, Toko Sawabe, Tomoo Sawabe, Toshiyoshi Araki

研究成果: ジャーナルへの寄稿コメント/討論

抄録

The strain number is missing in the description of V. aphrogenes in the first and second paragraphs under the subheading “Description of Vibrio aphrogenes sp. nov.” in the Results and discussion section. Please see the corrected paragraph below. Description of Vibrio aphrogenes sp. nov. V. aphrogenes sp. nov. (aph.ro’ge.nes. Gr. n. aphros, foam; Gr. suff. -genes, producing; N.L. adj. aphrogenes, foam-producing, referring to gas formation of the strain). Gram-negative, facultative anaerobic, non-motile rods isolated from surface of seaweed collected in Mie Prefecture in Japan. Colonies on ZoBell 2216E agar medium were cream or transparent white, round, and smooth on the edge. No flagellum was observed. Sodium ion is essential for growth. Growth occurs at NaCl concentrations of 1.0 to 10.0% and at temperatures between 4 and 40C. V. aphrogenes tested positive for production of alginase, lipase and DNase, oxidase, catalase, gas production from D-glucose, arginine dihydrolase, and is able to assimilate D-glucose, D-mannitol, D-mannose, D-galactose, maltose, D-gluconate, fuma-rate, glycerol, acetate, D-glucosamine, pyruvate, L-proline, D-ribose, L-alanine, L-asparagine, and L-serine. The bacteria tested negative for indole production, acetoin production, lysine decarboxylase, ornithine decarboxylase, amylase, agarose, gelatinase and κ-carrageenase productions, and is incapable of assimilating D-fructose, sucrose, melibiose, lactose, N-acetyl-glucosamine, succinate, citrate, aconitate, meso-erythritol, γ-aminobutyrate, L-tyrosine, Dsorbitol, DL-malate, α-ketoglutarate, trehalose, gluconate, δ-aminovalate, cellobiose, L-glutamate, putrescine, propionate, amygdalin, arabinose, D-galacturonate, glycerate, D-raffinose, rhamnose, salicine, DL-lactate, L-arginine, L-citrulline, glycine, histidine, and L-ornithine. The G+C content of DNA is 42.1%. Estimated genome size is 3.4 Mb on the basis of genome sequencing. The type strain is JCM 31643T = DSM 103759T = CA-1004T.

元の言語英語
記事番号e0189555
ジャーナルPloS one
12
発行部数12
DOI
出版物ステータス出版済み - 12 1 2017

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Seaweed
Vibrio
Glucosamine
lysine decarboxylase
macroalgae
Aconitic Acid
Amygdalin
Gases
glucosamine
Melibiose
Acetoin
Erythritol
foams
Raffinose
Aminobutyrates
Cellobiose
Genome Size
Glucose
Rhamnose
Gelatinases

All Science Journal Classification (ASJC) codes

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)

これを引用

Correction : Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053). / Tanaka, Mami; Endo, Shoko; Kotake, Fumihito; Al-Saari, Nurhidayu; Amin, A. K.M.Rohul; Feng, Gao; Mino, Sayaka; Doi, Hidetaka; Ogura, Yoshitoshi; Hayashi, Tetsuya; Suda, Wataru; Hattori, Masahira; Yumoto, Isao; Sawabe, Toko; Sawabe, Tomoo; Araki, Toshiyoshi.

:: PloS one, 巻 12, 番号 12, e0189555, 01.12.2017.

研究成果: ジャーナルへの寄稿コメント/討論

Tanaka, M, Endo, S, Kotake, F, Al-Saari, N, Amin, AKMR, Feng, G, Mino, S, Doi, H, Ogura, Y, Hayashi, T, Suda, W, Hattori, M, Yumoto, I, Sawabe, T, Sawabe, T & Araki, T 2017, 'Correction: Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053)', PloS one, 巻. 12, 番号 12, e0189555. https://doi.org/10.1371/journal.pone.0189555
Tanaka, Mami ; Endo, Shoko ; Kotake, Fumihito ; Al-Saari, Nurhidayu ; Amin, A. K.M.Rohul ; Feng, Gao ; Mino, Sayaka ; Doi, Hidetaka ; Ogura, Yoshitoshi ; Hayashi, Tetsuya ; Suda, Wataru ; Hattori, Masahira ; Yumoto, Isao ; Sawabe, Toko ; Sawabe, Tomoo ; Araki, Toshiyoshi. / Correction : Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053). :: PloS one. 2017 ; 巻 12, 番号 12.
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title = "Correction: Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053)",
abstract = "The strain number is missing in the description of V. aphrogenes in the first and second paragraphs under the subheading “Description of Vibrio aphrogenes sp. nov.” in the Results and discussion section. Please see the corrected paragraph below. Description of Vibrio aphrogenes sp. nov. V. aphrogenes sp. nov. (aph.ro’ge.nes. Gr. n. aphros, foam; Gr. suff. -genes, producing; N.L. adj. aphrogenes, foam-producing, referring to gas formation of the strain). Gram-negative, facultative anaerobic, non-motile rods isolated from surface of seaweed collected in Mie Prefecture in Japan. Colonies on ZoBell 2216E agar medium were cream or transparent white, round, and smooth on the edge. No flagellum was observed. Sodium ion is essential for growth. Growth occurs at NaCl concentrations of 1.0 to 10.0{\%} and at temperatures between 4 and 40C. V. aphrogenes tested positive for production of alginase, lipase and DNase, oxidase, catalase, gas production from D-glucose, arginine dihydrolase, and is able to assimilate D-glucose, D-mannitol, D-mannose, D-galactose, maltose, D-gluconate, fuma-rate, glycerol, acetate, D-glucosamine, pyruvate, L-proline, D-ribose, L-alanine, L-asparagine, and L-serine. The bacteria tested negative for indole production, acetoin production, lysine decarboxylase, ornithine decarboxylase, amylase, agarose, gelatinase and κ-carrageenase productions, and is incapable of assimilating D-fructose, sucrose, melibiose, lactose, N-acetyl-glucosamine, succinate, citrate, aconitate, meso-erythritol, γ-aminobutyrate, L-tyrosine, Dsorbitol, DL-malate, α-ketoglutarate, trehalose, gluconate, δ-aminovalate, cellobiose, L-glutamate, putrescine, propionate, amygdalin, arabinose, D-galacturonate, glycerate, D-raffinose, rhamnose, salicine, DL-lactate, L-arginine, L-citrulline, glycine, histidine, and L-ornithine. The G+C content of DNA is 42.1{\%}. Estimated genome size is 3.4 Mb on the basis of genome sequencing. The type strain is JCM 31643T = DSM 103759T = CA-1004T.",
author = "Mami Tanaka and Shoko Endo and Fumihito Kotake and Nurhidayu Al-Saari and Amin, {A. K.M.Rohul} and Gao Feng and Sayaka Mino and Hidetaka Doi and Yoshitoshi Ogura and Tetsuya Hayashi and Wataru Suda and Masahira Hattori and Isao Yumoto and Toko Sawabe and Tomoo Sawabe and Toshiyoshi Araki",
year = "2017",
month = "12",
day = "1",
doi = "10.1371/journal.pone.0189555",
language = "English",
volume = "12",
journal = "PLoS One",
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T1 - Correction

T2 - Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed (PLoS ONE (2017) 12:6 (e0180053) DOI: 10.1371/journal.pone.0180053)

AU - Tanaka, Mami

AU - Endo, Shoko

AU - Kotake, Fumihito

AU - Al-Saari, Nurhidayu

AU - Amin, A. K.M.Rohul

AU - Feng, Gao

AU - Mino, Sayaka

AU - Doi, Hidetaka

AU - Ogura, Yoshitoshi

AU - Hayashi, Tetsuya

AU - Suda, Wataru

AU - Hattori, Masahira

AU - Yumoto, Isao

AU - Sawabe, Toko

AU - Sawabe, Tomoo

AU - Araki, Toshiyoshi

PY - 2017/12/1

Y1 - 2017/12/1

N2 - The strain number is missing in the description of V. aphrogenes in the first and second paragraphs under the subheading “Description of Vibrio aphrogenes sp. nov.” in the Results and discussion section. Please see the corrected paragraph below. Description of Vibrio aphrogenes sp. nov. V. aphrogenes sp. nov. (aph.ro’ge.nes. Gr. n. aphros, foam; Gr. suff. -genes, producing; N.L. adj. aphrogenes, foam-producing, referring to gas formation of the strain). Gram-negative, facultative anaerobic, non-motile rods isolated from surface of seaweed collected in Mie Prefecture in Japan. Colonies on ZoBell 2216E agar medium were cream or transparent white, round, and smooth on the edge. No flagellum was observed. Sodium ion is essential for growth. Growth occurs at NaCl concentrations of 1.0 to 10.0% and at temperatures between 4 and 40C. V. aphrogenes tested positive for production of alginase, lipase and DNase, oxidase, catalase, gas production from D-glucose, arginine dihydrolase, and is able to assimilate D-glucose, D-mannitol, D-mannose, D-galactose, maltose, D-gluconate, fuma-rate, glycerol, acetate, D-glucosamine, pyruvate, L-proline, D-ribose, L-alanine, L-asparagine, and L-serine. The bacteria tested negative for indole production, acetoin production, lysine decarboxylase, ornithine decarboxylase, amylase, agarose, gelatinase and κ-carrageenase productions, and is incapable of assimilating D-fructose, sucrose, melibiose, lactose, N-acetyl-glucosamine, succinate, citrate, aconitate, meso-erythritol, γ-aminobutyrate, L-tyrosine, Dsorbitol, DL-malate, α-ketoglutarate, trehalose, gluconate, δ-aminovalate, cellobiose, L-glutamate, putrescine, propionate, amygdalin, arabinose, D-galacturonate, glycerate, D-raffinose, rhamnose, salicine, DL-lactate, L-arginine, L-citrulline, glycine, histidine, and L-ornithine. The G+C content of DNA is 42.1%. Estimated genome size is 3.4 Mb on the basis of genome sequencing. The type strain is JCM 31643T = DSM 103759T = CA-1004T.

AB - The strain number is missing in the description of V. aphrogenes in the first and second paragraphs under the subheading “Description of Vibrio aphrogenes sp. nov.” in the Results and discussion section. Please see the corrected paragraph below. Description of Vibrio aphrogenes sp. nov. V. aphrogenes sp. nov. (aph.ro’ge.nes. Gr. n. aphros, foam; Gr. suff. -genes, producing; N.L. adj. aphrogenes, foam-producing, referring to gas formation of the strain). Gram-negative, facultative anaerobic, non-motile rods isolated from surface of seaweed collected in Mie Prefecture in Japan. Colonies on ZoBell 2216E agar medium were cream or transparent white, round, and smooth on the edge. No flagellum was observed. Sodium ion is essential for growth. Growth occurs at NaCl concentrations of 1.0 to 10.0% and at temperatures between 4 and 40C. V. aphrogenes tested positive for production of alginase, lipase and DNase, oxidase, catalase, gas production from D-glucose, arginine dihydrolase, and is able to assimilate D-glucose, D-mannitol, D-mannose, D-galactose, maltose, D-gluconate, fuma-rate, glycerol, acetate, D-glucosamine, pyruvate, L-proline, D-ribose, L-alanine, L-asparagine, and L-serine. The bacteria tested negative for indole production, acetoin production, lysine decarboxylase, ornithine decarboxylase, amylase, agarose, gelatinase and κ-carrageenase productions, and is incapable of assimilating D-fructose, sucrose, melibiose, lactose, N-acetyl-glucosamine, succinate, citrate, aconitate, meso-erythritol, γ-aminobutyrate, L-tyrosine, Dsorbitol, DL-malate, α-ketoglutarate, trehalose, gluconate, δ-aminovalate, cellobiose, L-glutamate, putrescine, propionate, amygdalin, arabinose, D-galacturonate, glycerate, D-raffinose, rhamnose, salicine, DL-lactate, L-arginine, L-citrulline, glycine, histidine, and L-ornithine. The G+C content of DNA is 42.1%. Estimated genome size is 3.4 Mb on the basis of genome sequencing. The type strain is JCM 31643T = DSM 103759T = CA-1004T.

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JF - PLoS One

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