GenomeCons: A web server for manipulating multiple genome sequence alignments and their consensus sequences

Tetsuya Sato, Mikita Suyama

    研究成果: ジャーナルへの寄稿記事

    2 引用 (Scopus)

    抄録

    Summary: Genome sequence alignments provide valuable information on many aspects of molecular biological processes. In this study, we developed a web server, GenomeCons, for manipulating multiple genome sequence alignments and their consensus sequences for high-throughput genome sequence analyses. This server facilitates the visual inspection of multiple genome sequence alignments for a set of genomic intervals at a time. This allows the user to examine how these sites are evolutionarily conserved over time for their functional importance. The server also reports consensus sequences for the input genomic intervals, which can be applied to downstream analyses such as the identification of common motifs in the regions determined by ChIP-seq experiments. Availability and implementation: GenomeCons is freely accessible at http://bioinfo.sls.kyushu-u.ac.jp/genomecons/.

    元の言語英語
    ページ(範囲)1293-1295
    ページ数3
    ジャーナルBioinformatics
    31
    発行部数8
    DOI
    出版物ステータス出版済み - 4 15 2015

    Fingerprint

    Sequence Alignment
    Consensus Sequence
    Web Server
    Genome
    Servers
    Genes
    Genomics
    Server
    Biological Phenomena
    Interval
    High Throughput
    Sequence Analysis
    Inspection
    Chip
    Availability
    Throughput
    Experiment
    Experiments

    All Science Journal Classification (ASJC) codes

    • Statistics and Probability
    • Medicine(all)
    • Biochemistry
    • Molecular Biology
    • Computer Science Applications
    • Computational Theory and Mathematics
    • Computational Mathematics

    これを引用

    GenomeCons : A web server for manipulating multiple genome sequence alignments and their consensus sequences. / Sato, Tetsuya; Suyama, Mikita.

    :: Bioinformatics, 巻 31, 番号 8, 15.04.2015, p. 1293-1295.

    研究成果: ジャーナルへの寄稿記事

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