Highly sensitive targeted methylome sequencing by post-bisulfite adaptor tagging

研究成果: ジャーナルへの寄稿記事

22 引用 (Scopus)

抄録

The current gold standard method for methylome analysis is whole-genome bisulfite sequencing (WGBS), but its cost is substantial, especially for the purpose of multi-sample comparison of large methylomes. Shotgun bisulfite sequencing of target-enriched DNA, or targeted methylome sequencing (TMS), can be a flexible, cost-effective alternative to WGBS. However, the current TMS protocol requires a considerable amount of input DNA and hence is hardly applicable to samples of limited quantity. Here we report a method to overcome this limitation by using post-bisulfite adaptor tagging (PBAT), in which adaptor tagging is conducted after bisulfite treatment to circumvent bisulfite-induced loss of intact sequencing templates, thereby enabling TMS of a 100-fold smaller amount of input DNA with far fewer cycles of polymerase chain reaction than in the current protocol. We thus expect that the PBAT-mediated TMS will serve as an invaluable method in epigenomics.

元の言語英語
ページ(範囲)13-18
ページ数6
ジャーナルDNA Research
22
発行部数1
DOI
出版物ステータス出版済み - 1 1 2015

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DNA
Genome
Costs and Cost Analysis
Firearms
hydrogen sulfite
Epigenomics
Polymerase Chain Reaction

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Genetics

これを引用

Highly sensitive targeted methylome sequencing by post-bisulfite adaptor tagging. / Miura, Fumihito; Ito, Takashi.

:: DNA Research, 巻 22, 番号 1, 01.01.2015, p. 13-18.

研究成果: ジャーナルへの寄稿記事

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