抄録
Four housekeeping genes including gapA, groEL, gyrA and pgi were used in order to reveal a phylogenetic relationship among Paenibacillus species. Phylogenetic analysis and end-to-end pairwise analysis were carried out using nucleotide and amino acid sequences of the housekeeping genes. A monophylogenetic clade including P. popilliae, P. thiaminolyticus and P. dendritiformis formed in all phylogenetic trees. The results in both analyses indicated that the relationship between P. larvae subsp. larvae and P. popilliae was comparatively far. The result of the end-to-end pairwise analysis also showed that, among the Paenibacillus species used in this study, the closest species to P. popilliae was P. dendritiformis.
| 元の言語 | 英語 |
|---|---|
| ページ（範囲） | 1-11 |
| ページ数 | 11 |
| ジャーナル | Journal of Insect Biotechnology and Sericology |
| 巻 | 82 |
| 発行部数 | 1 |
| DOI | |
| 出版物ステータス | 出版済み - 8 5 2013 |
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All Science Journal Classification (ASJC) codes
- Biotechnology
- Applied Microbiology and Biotechnology
- Business, Management and Accounting(all)
- Agricultural and Biological Sciences(all)
- Insect Science
- Industrial and Manufacturing Engineering
これを引用
Phylogenetic analysis of Paenibacillus popilliae and its related taxa based on housekeeping genes. / Iiyama, Kazuhiro; Nishi, Omi; Mon, Hiroaki; Lee, Man; Kusakabe, Takahiro; Asano, Shin Ichiro; Yasunaga-Aoki, Chisa; Shimizu, Susumu.
：: Journal of Insect Biotechnology and Sericology, 巻 82, 番号 1, 05.08.2013, p. 1-11.研究成果: ジャーナルへの寄稿 › 記事
}
TY - JOUR
T1 - Phylogenetic analysis of Paenibacillus popilliae and its related taxa based on housekeeping genes
AU - Iiyama, Kazuhiro
AU - Nishi, Omi
AU - Mon, Hiroaki
AU - Lee, Man
AU - Kusakabe, Takahiro
AU - Asano, Shin Ichiro
AU - Yasunaga-Aoki, Chisa
AU - Shimizu, Susumu
PY - 2013/8/5
Y1 - 2013/8/5
N2 - Four housekeeping genes including gapA, groEL, gyrA and pgi were used in order to reveal a phylogenetic relationship among Paenibacillus species. Phylogenetic analysis and end-to-end pairwise analysis were carried out using nucleotide and amino acid sequences of the housekeeping genes. A monophylogenetic clade including P. popilliae, P. thiaminolyticus and P. dendritiformis formed in all phylogenetic trees. The results in both analyses indicated that the relationship between P. larvae subsp. larvae and P. popilliae was comparatively far. The result of the end-to-end pairwise analysis also showed that, among the Paenibacillus species used in this study, the closest species to P. popilliae was P. dendritiformis.
AB - Four housekeeping genes including gapA, groEL, gyrA and pgi were used in order to reveal a phylogenetic relationship among Paenibacillus species. Phylogenetic analysis and end-to-end pairwise analysis were carried out using nucleotide and amino acid sequences of the housekeeping genes. A monophylogenetic clade including P. popilliae, P. thiaminolyticus and P. dendritiformis formed in all phylogenetic trees. The results in both analyses indicated that the relationship between P. larvae subsp. larvae and P. popilliae was comparatively far. The result of the end-to-end pairwise analysis also showed that, among the Paenibacillus species used in this study, the closest species to P. popilliae was P. dendritiformis.
UR - http://www.scopus.com/inward/record.url?scp=84883175995&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84883175995&partnerID=8YFLogxK
U2 - 10.11416/jibs.82.1_001
DO - 10.11416/jibs.82.1_001
M3 - Article
AN - SCOPUS:84883175995
VL - 82
SP - 1
EP - 11
JO - Journal of Insect Biotechnology and Sericology
JF - Journal of Insect Biotechnology and Sericology
SN - 1346-8073
IS - 1
ER -